Conservation of cofitness between PP_0119 and PP_4993 in Pseudomonas putida KT2440

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0119 putative zinc uptake regulation protein ZUR 1.0 PP_4993 Glutathione synthetase 0.24 9
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_11485 Fur family transcriptional regulator 0.88 AO356_13475 glutathione synthetase — —
Pseudomonas sp. RS175 0.87 PFR28_04620 Zinc uptake regulation protein 0.88 PFR28_04232 Glutathione synthetase 0.26 28
Pseudomonas fluorescens SBW25 0.86 PFLU_RS00375 transcriptional repressor 0.89 PFLU_RS28320 glutathione synthase low > 109
Pseudomonas fluorescens SBW25-INTG 0.86 PFLU_RS00375 transcriptional repressor 0.89 PFLU_RS28320 glutathione synthase — —
Pseudomonas simiae WCS417 0.85 PS417_00385 Fur family transcriptional regulator 0.89 PS417_26675 glutathione synthetase — —
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_10910 Fur family transcriptional regulator 0.86 AO353_08110 glutathione synthetase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.84 Psyr_0276 zinc uptake regulation protein, putative 0.86 Psyr_0487 glutathione synthase low > 86
Pseudomonas syringae pv. syringae B728a 0.84 Psyr_0276 zinc uptake regulation protein, putative 0.86 Psyr_0487 glutathione synthase low > 86
Pseudomonas fluorescens FW300-N2E2 0.79 Pf6N2E2_4166 Zinc uptake regulation protein ZUR 0.88 Pf6N2E2_4612 Glutathione synthetase (EC 6.3.2.3) — —
Pseudomonas stutzeri RCH2 0.79 Psest_4308 Fe2+/Zn2+ uptake regulation proteins 0.77 Psest_0296 glutathione synthetase, prokaryotic — —
Pseudomonas fluorescens GW456-L13 0.77 PfGW456L13_598 Zinc uptake regulation protein ZUR 0.87 PfGW456L13_1021 Glutathione synthetase (EC 6.3.2.3) low > 87
Pseudomonas sp. S08-1 0.73 OH686_12240 Zinc uptake regulation protein Zur 0.84 OH686_10915 glutathione synthase low > 80
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_1871 Zinc uptake regulation protein ZUR 0.86 Pf1N1B4_2352 Glutathione synthetase (EC 6.3.2.3) low > 87
Marinobacter adhaerens HP15 0.58 HP15_3521 zinc uptake regulation protein 0.65 HP15_3512 glutathione synthetase low > 73
Azospirillum sp. SherDot2 0.55 MPMX19_01585 Zinc uptake regulation protein 0.42 MPMX19_02474 Glutathione synthetase — —
Azospirillum brasilense Sp245 0.54 AZOBR_RS09280 Fur family transcriptional regulator 0.41 AZOBR_RS02170 glutathione synthetase low > 97
Magnetospirillum magneticum AMB-1 0.53 AMB_RS11670 transcriptional repressor 0.41 AMB_RS22800 glutathione synthase — —
Acinetobacter radioresistens SK82 0.44 MPMX26_00095 Zinc uptake regulation protein 0.63 MPMX26_02936 Glutathione synthetase low > 36
Phaeobacter inhibens DSM 17395 0.43 PGA1_262p02230 zinc uptake regulation protein zur-like protein 0.41 PGA1_c26710 glutathione synthetase GshB — —
Rhodanobacter denitrificans FW104-10B01 0.43 LRK54_RS01640 transcriptional repressor 0.58 LRK54_RS04200 glutathione synthase — —
Rhodanobacter denitrificans MT42 0.43 LRK55_RS01420 transcriptional repressor 0.58 LRK55_RS03970 glutathione synthase — —
Rhodanobacter sp. FW510-T8 0.42 OKGIIK_04915 Ferric uptake regulation protein 0.58 OKGIIK_11075 gshB glutathione synthase low > 52
Rhodospirillum rubrum S1H 0.42 Rru_A1911 Ferric uptake regulator (FUR) family (NCBI) 0.40 Rru_A3690 Glutathione synthetase (NCBI) — —
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS02580 Fur family transcriptional regulator 0.46 QEN71_RS01415 glutathione synthase low > 153
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS07900 transcriptional repressor 0.58 ABZR86_RS10370 glutathione synthase — —
Xanthomonas campestris pv. campestris strain 8004 0.40 Xcc-8004.1790.1 Zinc uptake regulation protein ZUR 0.57 Xcc-8004.1501.1 Glutathione synthetase (EC 6.3.2.3) — —
Rhodopseudomonas palustris CGA009 0.38 TX73_002680 Fur family transcriptional regulator 0.37 TX73_001670 glutathione synthase — —
Alteromonas macleodii MIT1002 0.37 MIT1002_03799 Zinc uptake regulation protein 0.55 MIT1002_03055 Glutathione synthetase low > 70
Dinoroseobacter shibae DFL-12 0.37 Dshi_1703 putative ferric uptake regulator, Fur family (RefSeq) 0.37 Dshi_2829 glutathione synthetase (RefSeq) — —
Bosea sp. OAE506 0.36 ABIE41_RS09035 transcriptional repressor 0.36 ABIE41_RS03330 glutathione synthase — —
Lysobacter sp. OAE881 0.36 ABIE51_RS06205 transcriptional repressor 0.59 ABIE51_RS05210 glutathione synthase — —
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_04161 ferric uptake regulator, Fur family 0.44 H281DRAFT_02010 glutathione synthase low > 103
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS16125 Fur family transcriptional regulator 0.44 BPHYT_RS02560 glutathione synthetase low > 109
Dickeya dadantii 3937 0.33 DDA3937_RS02765 zinc uptake transcriptional repressor Zur 0.65 DDA3937_RS18560 glutathione synthase low > 74
Pectobacterium carotovorum WPP14 0.33 HER17_RS18780 zinc uptake transcriptional repressor Zur 0.66 HER17_RS02635 glutathione synthase low > 75
Dickeya dianthicola ME23 0.32 DZA65_RS02895 zinc uptake transcriptional repressor Zur 0.65 DZA65_RS19630 glutathione synthase low > 75
Dickeya dianthicola 67-19 0.32 HGI48_RS02740 zinc uptake transcriptional repressor Zur 0.65 HGI48_RS18495 glutathione synthase low > 71
Vibrio cholerae E7946 ATCC 55056 0.32 CSW01_01980 transcriptional regulator Zur 0.66 CSW01_02490 glutathione synthetase 0.80 35
Serratia liquefaciens MT49 0.31 IAI46_22990 zinc uptake transcriptional repressor Zur 0.67 IAI46_21390 glutathione synthase low > 86
Caulobacter crescentus NA1000 0.31 CCNA_00362 zinc uptake regulation protein 0.41 CCNA_00140 glutathione synthetase — —
Caulobacter crescentus NA1000 Δfur 0.31 CCNA_00362 zinc uptake regulation protein 0.41 CCNA_00140 glutathione synthetase — —
Rahnella sp. WP5 0.30 EX31_RS11860 zinc uptake transcriptional repressor Zur 0.64 EX31_RS02665 glutathione synthase 0.48 64
Sphingomonas koreensis DSMZ 15582 0.30 Ga0059261_1545 Fe2+/Zn2+ uptake regulation proteins 0.37 Ga0059261_2757 glutathione synthase (EC 6.3.2.3) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.30 A4249_RS14805 Fur family transcriptional regulator 0.40 A4249_RS14140 glutathione synthase — —
Enterobacter asburiae PDN3 0.29 EX28DRAFT_4266 Fe2+/Zn2+ uptake regulation proteins 0.65 EX28DRAFT_2985 glutathione synthase (EC 6.3.2.3) low > 76
Erwinia tracheiphila SCR3 0.29 LU632_RS22295 zur zinc uptake transcriptional repressor Zur 0.65 LU632_RS05480 gshB glutathione synthase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.28 GFF1416 Zinc uptake regulation protein ZUR 0.65 GFF3049 Glutathione synthetase (EC 6.3.2.3) low > 78
Escherichia coli ECRC99 0.28 KEDOAH_15110 zur zinc uptake transcriptional repressor Zur 0.66 KEDOAH_08865 gshB glutathione synthase — —
Escherichia coli ECRC98 0.28 JDDGAC_16675 zur zinc uptake transcriptional repressor Zur 0.66 JDDGAC_22905 gshB glutathione synthase — —
Escherichia coli ECRC101 0.28 MCAODC_03550 zur zinc uptake transcriptional repressor Zur 0.66 MCAODC_09795 gshB glutathione synthase — —
Escherichia coli ECRC101 0.28 OKFHMN_13050 zur zinc uptake transcriptional repressor Zur 0.66 OKFHMN_19275 gshB glutathione synthase — —
Escherichia coli ECRC102 0.28 NIAGMN_10800 zur zinc uptake transcriptional repressor Zur 0.66 NIAGMN_17040 gshB glutathione synthase — —
Enterobacter sp. TBS_079 0.28 MPMX20_00262 Zinc uptake regulation protein 0.64 MPMX20_03805 Glutathione synthetase low > 85
Castellaniella sp019104865 MT123 0.28 ABCV34_RS13430 Fur family transcriptional regulator 0.46 ABCV34_RS04795 glutathione synthase low > 48
Klebsiella michiganensis M5al 0.28 BWI76_RS01890 transcriptional regulator Zur 0.66 BWI76_RS24075 glutathione synthase 0.30 24
Escherichia coli ECOR27 0.28 NOLOHH_05205 zur zinc uptake transcriptional repressor Zur 0.66 NOLOHH_11145 gshB glutathione synthase low > 57
Escherichia coli ECOR38 0.28 HEPCGN_11570 zur zinc uptake transcriptional repressor Zur 0.65 HEPCGN_18580 gshB glutathione synthase 0.89 55
Escherichia coli ECRC62 0.28 BNILDI_06315 zur zinc uptake transcriptional repressor Zur 0.66 BNILDI_09725 gshB glutathione synthase — —
Escherichia coli BW25113 0.28 b4046 yjbK putative regulator (VIMSS) 0.66 b2947 gshB glutathione synthetase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.28 OHPLBJKB_03997 Zinc uptake regulation protein 0.66 OHPLBJKB_00771 Glutathione synthetase low > 73
Escherichia coli BL21 0.28 ECD_03918 transcriptional repressor, Zn(II)-binding 0.66 ECD_02777 glutathione synthetase 0.60 21
Escherichia coli Nissle 1917 0.27 ECOLIN_RS23350 zinc uptake transcriptional repressor Zur 0.66 ECOLIN_RS16395 glutathione synthase — —
Escherichia fergusonii Becca 0.27 EFB2_04557 Zinc uptake regulation protein 0.66 EFB2_00955 Glutathione synthetase low > 86

Not shown: 0 genomes with orthologs for PP_0119 only; 23 genomes with orthologs for PP_4993 only