| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas putida KT2440 | 1.0 | PP_0949 | | putative ATP-binding protein UPF0042 | 1.0 | PP_1319 | | Ubiquinol--cytochrome c reductase, cytochrome c1 | 0.38 | 9 |
| Pseudomonas fluorescens GW456-L13 | 0.92 | PfGW456L13_5017 | | Hypothetical ATP-binding protein UPF0042, contains P-loop | 0.90 | PfGW456L13_1636 | | ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.92 | AO356_07050 | | glmZ(sRNA)-inactivating NTPase | 0.90 | AO356_17075 | | cytochrome C | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.91 | Pf6N2E2_3270 | | Hypothetical ATP-binding protein UPF0042, contains P-loop | 0.89 | Pf6N2E2_5339 | | ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.90 | Pf1N1B4_1083 | | Hypothetical ATP-binding protein UPF0042, contains P-loop | 0.88 | Pf1N1B4_960 | | ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit | — | — |
| Pseudomonas sp. RS175 | 0.90 | PFR28_00170 | | RNase adapter protein RapZ | 0.90 | PFR28_03604 | | Ammonia monooxygenase gamma subunit | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.90 | AO353_05195 | | glmZ(sRNA)-inactivating NTPase | 0.87 | AO353_15255 | | cytochrome C | — | — |
| Pseudomonas simiae WCS417 | 0.89 | PS417_04330 | | glmZ(sRNA)-inactivating NTPase | 0.85 | PS417_04165 | | cytochrome C | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.89 | PFLU_RS04385 | | RNase adapter RapZ | 0.85 | PFLU_RS04205 | | cytochrome c1 | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.89 | PFLU_RS04385 | | RNase adapter RapZ | 0.85 | PFLU_RS04205 | | cytochrome c1 | low | > 109 |
| Pseudomonas sp. S08-1 | 0.85 | OH686_08560 | | RNase adapter protein RapZ | 0.89 | OH686_08380 | | Ubiquinol-cytochrome C reductase, cytochrome C1 subunit | — | — |
| Pseudomonas stutzeri RCH2 | 0.84 | Psest_3316 | | Predicted P-loop-containing kinase | 0.79 | Psest_3277 | | Cytochrome c1 | — | — |
| Marinobacter adhaerens HP15 | 0.55 | HP15_2445 | | protein yhbJ | 0.51 | HP15_547 | | ubiquinol-cytochrome c reductase, cytochrome c1 | — | — |
| Alteromonas macleodii MIT1002 | 0.48 | MIT1002_00824 | | glmZ(sRNA)-inactivating NTPase | 0.48 | MIT1002_00816 | | Cytochrome c1 precursor | low | > 70 |
| Shewanella loihica PV-4 | 0.47 | Shew_3314 | | hypothetical protein (RefSeq) | 0.45 | Shew_0572 | | cytochrome c1 (RefSeq) | — | — |
| Shewanella amazonensis SB2B | 0.46 | Sama_3091 | | hypothetical protein (RefSeq) | 0.48 | Sama_3019 | | ubiquinol-cytochrome c reductase cytochrome c1 subunit (RefSeq) | low | > 62 |
| Vibrio cholerae E7946 ATCC 55056 | 0.46 | CSW01_12830 | | RNase adaptor protein RapZ | 0.47 | CSW01_03055 | | cytochrome c1 | low | > 62 |
| Burkholderia phytofirmans PsJN | 0.46 | BPHYT_RS02885 | | glmZ(sRNA)-inactivating NTPase | 0.36 | BPHYT_RS17620 | | cytochrome C | low | > 109 |
| Shewanella sp. ANA-3 | 0.46 | Shewana3_0669 | | hypothetical protein (RefSeq) | 0.48 | Shewana3_0603 | | cytochrome c1 (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.46 | SO3964 | | conserved hypothetical protein (NCBI ptt file) | 0.48 | SO0610 | petC | ubiquinol-cytochrome c reductase, cytochrome c1 (NCBI ptt file) | low | > 76 |
| Paraburkholderia sabiae LMG 24235 | 0.46 | QEN71_RS01735 | | RNase adapter RapZ | 0.35 | QEN71_RS27775 | | cytochrome c1 | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.45 | H281DRAFT_01931 | | UPF0042 nucleotide-binding protein | 0.37 | H281DRAFT_05671 | | ubiquinol-cytochrome c reductase cytochrome c1 subunit | — | — |
| Rhodanobacter sp. FW510-T8 | 0.45 | OKGIIK_02250 | rapZ | RNase adapter RapZ | 0.35 | OKGIIK_03015 | | cytochrome c1 | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.45 | ABZR86_RS19800 | | RNase adapter RapZ | 0.37 | ABZR86_RS09870 | | cytochrome c1 | low | > 74 |
| Ralstonia solanacearum IBSBF1503 | 0.45 | RALBFv3_RS11145 | | RNase adapter RapZ | 0.40 | RALBFv3_RS06720 | | cytochrome c | low | > 76 |
| Ralstonia solanacearum UW163 | 0.45 | UW163_RS02435 | | RNase adapter RapZ | 0.40 | UW163_RS06895 | | cytochrome c | — | — |
| Ralstonia solanacearum PSI07 | 0.44 | RPSI07_RS22155 | | RNase adapter RapZ | 0.39 | RPSI07_RS10515 | | cytochrome c | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.44 | RS_RS01995 | | RNase adaptor protein RapZ | 0.40 | RS_RS14665 | | cytochrome c | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.44 | ABZR87_RS07035 | | RNase adapter RapZ | 0.39 | ABZR87_RS02375 | | cytochrome c1 | 0.54 | 40 |
| Rhodanobacter denitrificans MT42 | 0.44 | LRK55_RS12560 | | RNase adapter RapZ | 0.35 | LRK55_RS13490 | | cytochrome c1 | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.44 | LRK54_RS12860 | | RNase adapter RapZ | 0.35 | LRK54_RS13775 | | cytochrome c1 | — | — |
| Paraburkholderia graminis OAS925 | 0.44 | ABIE53_000714 | | UPF0042 nucleotide-binding protein | 0.37 | ABIE53_003683 | | ubiquinol-cytochrome c reductase cytochrome c1 subunit | low | > 113 |
| Lysobacter sp. OAE881 | 0.44 | ABIE51_RS15975 | | RNase adapter RapZ | 0.41 | ABIE51_RS15430 | | cytochrome c1 | low | > 62 |
| Dechlorosoma suillum PS | 0.44 | Dsui_0990 | | putative P-loop-containing kinase | 0.40 | Dsui_1814 | | cytochrome c1 | — | — |
| Kangiella aquimarina DSM 16071 | 0.44 | B158DRAFT_2077 | | Predicted P-loop-containing kinase | 0.42 | B158DRAFT_2102 | | Cytochrome c1 | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.42 | RR42_RS02060 | | nucleotide-binding protein | 0.37 | RR42_RS18815 | | cytochrome C | 0.41 | 52 |
| Herbaspirillum seropedicae SmR1 | 0.40 | HSERO_RS19535 | | nucleotide-binding protein | 0.37 | HSERO_RS20235 | | cytochrome C | low | > 78 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.40 | Xcc-8004.1658.1 | | hypothetical protein | 0.40 | Xcc-8004.2230.1 | | ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit | low | > 74 |
| Acidovorax sp. GW101-3H11 | 0.40 | Ac3H11_3459 | | Hypothetical ATP-binding protein UPF0042, contains P-loop | 0.32 | Ac3H11_4752 | | ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.39 | GFF828 | | Hypothetical ATP-binding protein UPF0042, contains P-loop | 0.35 | GFF1293 | | ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit | low | > 90 |
| Variovorax sp. SCN45 | 0.39 | GFF2356 | | RNase adapter protein RapZ | 0.31 | GFF6696 | | Ubiquinol-cytochrome C reductase, cytochrome C1 subunit | low | > 127 |
| Variovorax sp. OAS795 | 0.39 | ABID97_RS23710 | | RNase adapter RapZ | 0.29 | ABID97_RS22975 | | cytochrome c1 | 0.42 | 39 |
| Castellaniella sp019104865 MT123 | 0.39 | ABCV34_RS14330 | | RNase adapter RapZ | 0.33 | ABCV34_RS12625 | | cytochrome c1 | — | — |
| Azospirillum sp. SherDot2 | 0.34 | MPMX19_02622 | | Nucleotide-binding protein | 0.13 | MPMX19_05014 | | Cytochrome c1 | low | > 112 |
Not shown: 39 genomes with orthologs for PP_0949 only; 0 genomes with orthologs for PP_1319 only