Conservation of cofitness between PP_1317 and PP_0504 in Pseudomonas putida KT2440

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1317 Ubiquinol-cytochrome c reductase iron-sulfur subunit 1.0 PP_0504 Outer membrane protein OprG 0.41 16
Pseudomonas fluorescens FW300-N2E3 0.87 AO353_15245 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.55 AO353_06765 hypothetical protein — —
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_962 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) 0.50 Pf1N1B4_2639 Outer membrane protein W precursor low > 87
Pseudomonas fluorescens FW300-N2E2 0.86 Pf6N2E2_5337 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) 0.51 Pf6N2E2_4909 Outer membrane protein W precursor low > 103
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_17065 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.51 AO356_14880 hypothetical protein low > 104
Pseudomonas sp. RS175 0.86 PFR28_03606 Ubiquinol-cytochrome c reductase iron-sulfur subunit 0.52 PFR28_03959 Outer membrane protein W — —
Pseudomonas sp. S08-1 0.86 OH686_08390 ubiquinol-cytochrome c reductase, iron-sulfur subunit 0.58 OH686_15635 Outer membrane protein W precursor — —
Pseudomonas fluorescens SBW25 0.85 PFLU_RS04195 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.49 PFLU_RS26950 outer membrane beta-barrel protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.85 PFLU_RS04195 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.49 PFLU_RS26950 outer membrane beta-barrel protein 0.32 62
Pseudomonas simiae WCS417 0.85 PS417_04155 ubiquinol-cytochrome C reductase 0.56 PS417_25315 membrane protein — —
Pseudomonas stutzeri RCH2 0.84 Psest_3279 ubiquinol-cytochrome c reductase, iron-sulfur subunit 0.55 Psest_3571 Outer membrane protein W — —
Marinobacter adhaerens HP15 0.65 HP15_545 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.46 HP15_3604 outer membrane protein OmpW — —
Lysobacter sp. OAE881 0.60 ABIE51_RS15440 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.24 ABIE51_RS17100 OmpW family outer membrane protein low > 62
Xanthomonas campestris pv. campestris strain 8004 0.57 Xcc-8004.2228.1 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) 0.23 Xcc-8004.1234.1 Outer membrane protein W precursor low > 74
Vibrio cholerae E7946 ATCC 55056 0.56 CSW01_03045 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.43 CSW01_18465 outer membrane protein W low > 62
Kangiella aquimarina DSM 16071 0.54 B158DRAFT_2100 ubiquinol-cytochrome c reductase, iron-sulfur subunit 0.37 B158DRAFT_2223 Outer membrane protein W — —
Shewanella amazonensis SB2B 0.53 Sama_3021 ubiquinol--cytochrome-c reductase (RefSeq) 0.42 Sama_1371 outer membrane protein W (RefSeq) low > 62
Shewanella loihica PV-4 0.53 Shew_0570 ubiquinol-cytochrome c reductase, iron-sulfur subunit (RefSeq) 0.42 Shew_2554 outer membrane protein W (RefSeq) low > 60
Shewanella oneidensis MR-1 0.51 SO0608 petA ubiquinol-cytochrome c reductase, iron-sulfur subunit (NCBI ptt file) 0.42 SO1673 outer membrane protein OmpW, putative (NCBI ptt file) — —
Shewanella sp. ANA-3 0.50 Shewana3_0601 ubiquinol-cytochrome c reductase, iron-sulfur subunit (RefSeq) 0.45 Shewana3_2775 outer membrane protein W (RefSeq) — —
Castellaniella sp019104865 MT123 0.48 ABCV34_RS12635 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.32 ABCV34_RS01650 OmpW family outer membrane protein — —
Alteromonas macleodii MIT1002 0.47 MIT1002_00814 Ubiquinol-cytochrome c reductase iron-sulfur subunit 0.42 MIT1002_00027 Outer membrane protein W precursor low > 70
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS18825 ubiquinol-cytochrome C reductase 0.19 RR42_RS20315 membrane protein low > 128
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS20245 ubiquinol-cytochrome C reductase 0.18 HSERO_RS16010 membrane protein — —
Paraburkholderia graminis OAS925 0.44 ABIE53_003685 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.20 ABIE53_002375 outer membrane protein low > 113
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_05669 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.20 H281DRAFT_05175 outer membrane protein — —
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS27785 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.22 QEN71_RS28020 OmpW family outer membrane protein low > 153
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS17630 ubiquinol-cytochrome C reductase 0.21 BPHYT_RS17865 membrane protein low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF1295 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) 0.17 GFF1690 Outer membrane protein W precursor — —
Ralstonia solanacearum PSI07 0.40 RPSI07_RS10505 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.21 RPSI07_RS08300 OmpW family protein — —
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS06730 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.20 RALBFv3_RS08970 OmpW family protein — —
Ralstonia sp. UNC404CL21Col 0.40 ABZR87_RS02385 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.21 ABZR87_RS02580 OmpW family protein low > 80
Ralstonia solanacearum GMI1000 0.40 RS_RS14675 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.20 RS_RS16785 OmpW family protein low > 80
Azospirillum sp. SherDot2 0.35 MPMX19_05012 Ubiquinol-cytochrome c reductase iron-sulfur subunit 0.21 MPMX19_04896 Outer membrane protein W — —
Azospirillum brasilense Sp245 0.33 AZOBR_RS20745 ubiquinol-cytochrome C reductase 0.22 AZOBR_RS20245 membrane protein — —
Bosea sp. OAE506 0.32 ABIE41_RS11190 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.23 ABIE41_RS06175 OmpW family protein low > 77
Rhodopseudomonas palustris CGA009 0.29 TX73_006120 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.15 TX73_023375 OmpW family protein — —
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_00505 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.22 CCNA_01475 OmpW family outer membrane cation channel low > 67
Caulobacter crescentus NA1000 0.27 CCNA_00505 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.22 CCNA_01475 OmpW family outer membrane cation channel low > 66
Dinoroseobacter shibae DFL-12 0.25 Dshi_3278 ubiquinol-cytochrome c reductase, iron-sulfur subunit (RefSeq) 0.26 Dshi_1299 OmpW family protein (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.23 PGA1_c34000 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.26 PGA1_c10290 outer membrane protein — —

Not shown: 15 genomes with orthologs for PP_1317 only; 29 genomes with orthologs for PP_0504 only