Conservation of cofitness between PP_1764 and PP_0406 in Pseudomonas putida KT2440

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1764 Phosphoglycolate phosphatase 2 1.0 PP_0406 Nucleotidyltransferase family protein 0.56 8
Pseudomonas syringae pv. syringae B728a 0.85 Psyr_3651 2-phosphoglycolate phosphatase, prokaryotic:HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily IA, variant 1 0.73 Psyr_4622 Nucleotidyl transferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.85 Psyr_3651 2-phosphoglycolate phosphatase, prokaryotic:HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily IA, variant 1 0.73 Psyr_4622 Nucleotidyl transferase low > 86
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_02100 phosphoglycolate phosphatase 0.76 AO353_07290 mannose-1-phosphate guanylyltransferase 0.72 2
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS08065 N-acetylmuramic acid 6-phosphate phosphatase MupP 0.73 PFLU_RS27440 nucleotidyltransferase family protein 0.89 1
Pseudomonas fluorescens SBW25 0.84 PFLU_RS08065 N-acetylmuramic acid 6-phosphate phosphatase MupP 0.73 PFLU_RS27440 nucleotidyltransferase family protein 0.96 1
Pseudomonas simiae WCS417 0.83 PS417_08095 phosphoglycolate phosphatase 0.73 PS417_25785 mannose-1-phosphate guanylyltransferase — —
Pseudomonas fluorescens GW456-L13 0.82 PfGW456L13_2170 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase 0.76 PfGW456L13_1205 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) 0.82 4
Pseudomonas sp. RS175 0.82 PFR28_00900 N-acetylmuramic acid 6-phosphate phosphatase 0.75 PFR28_04059 N-acetylmuramate alpha-1-phosphate uridylyltransferase 0.70 1
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_2526 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase 0.76 Pf6N2E2_4810 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) 0.74 1
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_03495 phosphoglycolate phosphatase 0.75 AO356_14360 mannose-1-phosphate guanylyltransferase 0.74 1
Pseudomonas fluorescens FW300-N1B4 0.81 Pf1N1B4_357 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase 0.74 Pf1N1B4_2533 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) — —
Pseudomonas stutzeri RCH2 0.80 Psest_2001 2-phosphoglycolate phosphatase, prokaryotic 0.74 Psest_3663 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) — —
Pseudomonas sp. S08-1 0.73 OH686_20840 phosphoglycolate phosphatase, bacterial 0.75 OH686_15065 Nucleotidyl transferase putative 0.99 1
Marinobacter adhaerens HP15 0.46 HP15_1226 2-phosphoglycolate phosphatase, prokaryotic 0.55 HP15_3283 nucleotidyltransferase family protein — —
Cupriavidus basilensis FW507-4G11 0.41 RR42_RS04430 phosphoglycolate phosphatase 0.43 RR42_RS02750 mannose-1-phosphate guanylyltransferase 0.69 1
Paraburkholderia bryophila 376MFSha3.1 0.40 H281DRAFT_03931 phosphoglycolate phosphatase 0.40 H281DRAFT_04635 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) low > 103
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS14945 phosphoglycolate phosphatase 0.40 BPHYT_RS03280 mannose-1-phosphate guanylyltransferase low > 109
Paraburkholderia graminis OAS925 0.40 ABIE53_003164 2-phosphoglycolate phosphatase 0.40 ABIE53_000795 MurNAc alpha-1-phosphate uridylyltransferase 0.52 1
Rhodanobacter denitrificans FW104-10B01 0.39 LRK54_RS02460 phosphoglycolate phosphatase 0.50 LRK54_RS03110 nucleotidyltransferase family protein 0.95 1
Acinetobacter radioresistens SK82 0.39 MPMX26_00033 N-acetylmuramic acid 6-phosphate phosphatase 0.50 MPMX26_01213 N-acetylmuramate alpha-1-phosphate uridylyltransferase 0.93 1
Ralstonia solanacearum PSI07 0.39 RPSI07_RS19745 phosphoglycolate phosphatase 0.46 RPSI07_RS21495 nucleotidyltransferase family protein low > 81
Rhodanobacter denitrificans MT42 0.39 LRK55_RS02215 phosphoglycolate phosphatase 0.51 LRK55_RS02860 nucleotidyltransferase family protein 0.73 11
Acidovorax sp. GW101-3H11 0.39 Ac3H11_2569 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase 0.37 Ac3H11_651 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) — —
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.2290.1 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase 0.52 Xcc-8004.1680.1 FIG006611: nucleotidyltransferase 0.65 1
Variovorax sp. SCN45 0.38 GFF6189 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase 0.34 GFF7178 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) low > 127
Paraburkholderia sabiae LMG 24235 0.38 QEN71_RS04040 HAD-IA family hydrolase 0.41 QEN71_RS02105 nucleotidyltransferase family protein low > 153
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS13725 phosphoglycolate phosphatase 0.46 RALBFv3_RS11720 nucleotidyltransferase family protein low > 76
Ralstonia solanacearum GMI1000 0.38 RS_RS04460 phosphoglycolate phosphatase 0.47 RS_RS02545 nucleotidyltransferase family protein 0.58 40
Ralstonia solanacearum UW163 0.38 UW163_RS16085 phosphoglycolate phosphatase 0.46 UW163_RS01865 nucleotidyltransferase family protein — —
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS09415 HAD-IA family hydrolase 0.43 ABZR87_RS07675 N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU 0.44 6
Kangiella aquimarina DSM 16071 0.37 B158DRAFT_2318 2-phosphoglycolate phosphatase, prokaryotic 0.49 B158DRAFT_0793 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 0.94 4
Lysobacter sp. OAE881 0.37 ABIE51_RS13485 phosphoglycolate phosphatase 0.53 ABIE51_RS15870 N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU 0.48 15
Dechlorosoma suillum PS 0.37 Dsui_1933 2-phosphoglycolate phosphatase 0.49 Dsui_1589 Nucleoside-diphosphate-sugar pyrophosphorylase family protein low > 51
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS18455 phosphoglycolate phosphatase 0.43 HSERO_RS03515 mannose-1-phosphate guanylyltransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF5338 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase 0.36 GFF2486 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) — —
Variovorax sp. OAS795 0.36 ABID97_RS09545 HAD-IA family hydrolase 0.34 ABID97_RS02455 nucleotidyltransferase family protein low > 91
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS08775 HAD-IA family hydrolase 0.44 ABZR86_RS09505 N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU 0.70 1
Castellaniella sp019104865 MT123 0.31 ABCV34_RS07135 HAD-IA family hydrolase 0.50 ABCV34_RS09510 N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU low > 48
Shewanella oneidensis MR-1 0.29 SO2414 phosphoglycolate phosphatase, putative (NCBI ptt file) 0.48 SO3634 nucleotidyltransferase family protein (NCBI ptt file) 0.46 1
Shewanella loihica PV-4 0.29 Shew_1947 HAD family hydrolase (RefSeq) 0.52 Shew_0884 nucleotidyl transferase (RefSeq) — —
Shewanella amazonensis SB2B 0.28 Sama_1729 phosphoglycolate phosphatase (RefSeq) 0.51 Sama_2814 nucleotidyl transferase (RefSeq) 0.73 1
Shewanella sp. ANA-3 0.28 Shewana3_1970 HAD family hydrolase (RefSeq) 0.49 Shewana3_3204 nucleotidyl transferase (RefSeq) low > 73
Bacteroides ovatus ATCC 8483 0.14 BACOVA_03230 HAD hydrolase, family IA, variant 3 0.26 BACOVA_04369 nucleotidyl transferase low > 94

Not shown: 2 genomes with orthologs for PP_1764 only; 18 genomes with orthologs for PP_0406 only