| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pantoea sp. MT58 | 1.0 | IAI47_11310 | | redox-regulated ATPase YchF | 1.0 | IAI47_16990 | | DEAD/DEAH family ATP-dependent RNA helicase | 0.46 | 6 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.95 | GFF2784 | | GTP-binding and nucleic acid-binding protein YchF | 0.75 | GFF1504 | | DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) | low | > 78 |
| Dickeya dianthicola 67-19 | 0.94 | HGI48_RS10975 | | redox-regulated ATPase YchF | 0.75 | HGI48_RS03275 | | DEAD/DEAH family ATP-dependent RNA helicase | low | > 71 |
| Dickeya dianthicola ME23 | 0.94 | DZA65_RS11435 | | redox-regulated ATPase YchF | 0.75 | DZA65_RS03270 | | DEAD/DEAH family ATP-dependent RNA helicase | — | — |
| Erwinia tracheiphila SCR3 | 0.94 | LU632_RS13950 | ychF | redox-regulated ATPase YchF | 0.81 | LU632_RS21030 | | DEAD/DEAH family ATP-dependent RNA helicase | — | — |
| Dickeya dadantii 3937 | 0.94 | DDA3937_RS11035 | | redox-regulated ATPase YchF | 0.75 | DDA3937_RS03100 | | DEAD/DEAH family ATP-dependent RNA helicase | low | > 74 |
| Escherichia coli ECRC99 | 0.93 | KEDOAH_25405 | ychF | redox-regulated ATPase YchF | 0.74 | KEDOAH_09995 | deaD | ATP-dependent RNA helicase DeaD | — | — |
| Escherichia coli ECRC98 | 0.93 | JDDGAC_06165 | ychF | redox-regulated ATPase YchF | 0.74 | JDDGAC_21780 | deaD | ATP-dependent RNA helicase DeaD | — | — |
| Escherichia coli ECRC101 | 0.93 | OKFHMN_28410 | ychF | redox-regulated ATPase YchF | 0.74 | OKFHMN_18155 | deaD | ATP-dependent RNA helicase DeaD | — | — |
| Escherichia coli BW25113 | 0.93 | b1203 | ychF | translation-associated GTPase (NCBI) | 0.74 | b3162 | deaD | inducible ATP-independent RNA helicase (VIMSS) | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.93 | OHPLBJKB_02484 | | Ribosome-binding ATPase YchF | 0.74 | OHPLBJKB_00538 | | ATP-dependent RNA helicase DeaD | low | > 73 |
| Escherichia coli ECOR38 | 0.93 | HEPCGN_24875 | ychF | redox-regulated ATPase YchF | 0.74 | HEPCGN_17030 | deaD | ATP-dependent RNA helicase DeaD | — | — |
| Escherichia coli ECRC101 | 0.93 | MCAODC_21850 | ychF | redox-regulated ATPase YchF | 0.74 | MCAODC_08675 | deaD | ATP-dependent RNA helicase DeaD | — | — |
| Escherichia coli ECRC102 | 0.93 | NIAGMN_27825 | ychF | redox-regulated ATPase YchF | 0.74 | NIAGMN_15915 | deaD | ATP-dependent RNA helicase DeaD | — | — |
| Escherichia coli ECOR27 | 0.93 | NOLOHH_20650 | ychF | redox-regulated ATPase YchF | 0.74 | NOLOHH_09955 | deaD | ATP-dependent RNA helicase DeaD | — | — |
| Escherichia fergusonii Becca | 0.93 | EFB2_02724 | | Ribosome-binding ATPase YchF | 0.74 | EFB2_00661 | | ATP-dependent RNA helicase DeaD | low | > 86 |
| Escherichia coli Nissle 1917 | 0.93 | ECOLIN_RS07280 | | redox-regulated ATPase YchF | 0.74 | ECOLIN_RS18165 | | ATP-dependent RNA helicase DeaD | — | — |
| Escherichia coli BL21 | 0.93 | ECD_01178 | | catalase inhibitor protein; ATPase, K+-dependent, ribosome-associated | 0.74 | ECD_03029 | | ATP-dependent RNA helicase | — | — |
| Escherichia coli ECRC62 | 0.93 | BNILDI_18805 | ychF | redox-regulated ATPase YchF | 0.74 | BNILDI_01580 | deaD | ATP-dependent RNA helicase DeaD | — | — |
| Pectobacterium carotovorum WPP14 | 0.93 | HER17_RS10445 | | redox-regulated ATPase YchF | 0.77 | HER17_RS18175 | | DEAD/DEAH family ATP-dependent RNA helicase | low | > 75 |
| Serratia liquefaciens MT49 | 0.91 | IAI46_10240 | | redox-regulated ATPase YchF | 0.77 | IAI46_01970 | | DEAD/DEAH family ATP-dependent RNA helicase | — | — |
| Rahnella sp. WP5 | 0.90 | EX31_RS07380 | | redox-regulated ATPase YchF | 0.78 | EX31_RS08510 | | DEAD/DEAH family ATP-dependent RNA helicase | low | > 89 |
| Enterobacter asburiae PDN3 | 0.89 | EX28DRAFT_0821 | | GTP-binding protein YchF | 0.75 | EX28DRAFT_3211 | | Superfamily II DNA and RNA helicases | — | — |
| Enterobacter sp. TBS_079 | 0.89 | MPMX20_02645 | | Ribosome-binding ATPase YchF | 0.75 | MPMX20_04066 | | ATP-dependent RNA helicase DeaD | low | > 85 |
| Klebsiella michiganensis M5al | 0.89 | BWI76_RS17485 | | GTP-binding protein YchF | 0.77 | BWI76_RS25055 | | DEAD/DEAH family ATP-dependent RNA helicase | — | — |
| Shewanella amazonensis SB2B | 0.81 | Sama_2571 | | GTP-dependent nucleic acid-binding protein EngD (RefSeq) | 0.44 | Sama_0512 | | ATP-dependent RNA helicase DeaD (RefSeq) | 0.52 | 38 |
| Alteromonas macleodii MIT1002 | 0.81 | MIT1002_01504 | | Ribosome-binding ATPase YchF | 0.45 | MIT1002_00666 | | Cold-shock DEAD box protein A | 0.47 | 30 |
| Shewanella oneidensis MR-1 | 0.80 | SO1185 | | conserved hypothetical protein TIGR00092 (NCBI ptt file) | 0.42 | SO4034 | deaD | ATP-dependent RNA helicase DeaD (NCBI ptt file) | 0.48 | 3 |
| Shewanella sp. ANA-3 | 0.80 | Shewana3_1012 | | GTP-dependent nucleic acid-binding protein EngD (RefSeq) | 0.43 | Shewana3_3595 | | DEAD/DEAH box helicase domain-containing protein (RefSeq) | 0.50 | 51 |
| Shewanella loihica PV-4 | 0.78 | Shew_2919 | | translation-associated GTPase (RefSeq) | 0.45 | Shew_0531 | | DEAD/DEAH box helicase domain-containing protein (RefSeq) | low | > 60 |
| Vibrio cholerae E7946 ATCC 55056 | 0.74 | CSW01_10875 | | redox-regulated ATPase YchF | 0.36 | CSW01_18185 | | DEAD/DEAH box family ATP-dependent RNA helicase | low | > 62 |
| Pseudomonas sp. S08-1 | 0.73 | OH686_07965 | | GTP-binding and nucleic acid-binding protein YchF | 0.37 | OH686_22545 | | DEAD-box ATP-dependent RNA helicase DeaD ( CshA) | low | > 80 |
| Kangiella aquimarina DSM 16071 | 0.73 | B158DRAFT_2052 | | GTP-binding protein YchF | 0.44 | B158DRAFT_1850 | | ATP-dependent RNA helicase CsdA (EC 5.99.1.-) | low | > 40 |
| Pseudomonas putida KT2440 | 0.73 | PP_0719 | | ribosome-associated potassium-dependent informational ATP/GTPase | 0.35 | PP_1868 | | ATP-dependent DEAD-box RNA helicase DeaD | — | — |
| Pseudomonas sp. RS175 | 0.72 | PFR28_03664 | | Ribosome-binding ATPase YchF | 0.35 | PFR28_00980 | | ATP-dependent RNA helicase DeaD | low | > 88 |
| Pseudomonas stutzeri RCH2 | 0.72 | Psest_1103 | | GTP-binding protein YchF | 0.35 | Psest_1804 | | Superfamily II DNA and RNA helicases | 0.22 | 31 |
| Pseudomonas fluorescens FW300-N2E3 | 0.72 | AO353_14740 | | GTP-binding protein | 0.35 | AO353_19130 | | RNA helicase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.72 | PfGW456L13_1574 | | GTP-binding and nucleic acid-binding protein YchF | 0.35 | PfGW456L13_2247 | | DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.72 | Pf1N1B4_2912 | | GTP-binding and nucleic acid-binding protein YchF | 0.36 | Pf1N1B4_265 | | DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.71 | AO356_16450 | | GTP-binding protein | 0.35 | AO356_03110 | | RNA helicase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.71 | Psyr_0941 | | Conserved hypothetical protein 92 | 0.35 | Psyr_3619 | | Helicase, C-terminal:DbpA, RNA-binding:DEAD/DEAH box helicase, N-terminal | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.71 | Psyr_0941 | | Conserved hypothetical protein 92 | 0.35 | Psyr_3619 | | Helicase, C-terminal:DbpA, RNA-binding:DEAD/DEAH box helicase, N-terminal | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.71 | ABZR86_RS22010 | | redox-regulated ATPase YchF | 0.43 | ABZR86_RS08990 | | DEAD/DEAH box helicase | 0.70 | 3 |
| Pseudomonas simiae WCS417 | 0.71 | PS417_03560 | | GTP-binding protein | 0.35 | PS417_08540 | | RNA helicase | low | > 88 |
| Lysobacter sp. OAE881 | 0.70 | ABIE51_RS05745 | | redox-regulated ATPase YchF | 0.42 | ABIE51_RS12265 | | DEAD/DEAH box helicase | low | > 62 |
| Pseudomonas fluorescens SBW25 | 0.70 | PFLU_RS03610 | | redox-regulated ATPase YchF | 0.35 | PFLU_RS08490 | | DEAD/DEAH box helicase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.70 | PFLU_RS03610 | | redox-regulated ATPase YchF | 0.35 | PFLU_RS08490 | | DEAD/DEAH box helicase | low | > 109 |
| Dechlorosoma suillum PS | 0.69 | Dsui_1039 | | GTP-binding protein YchF | 0.46 | Dsui_1351 | | DNA/RNA helicase, superfamily II | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.69 | Xcc-8004.4168.1 | | GTP-binding and nucleic acid-binding protein YchF | 0.43 | Xcc-8004.1841.1 | | DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) | low | > 74 |
| Rhodanobacter denitrificans MT42 | 0.68 | LRK55_RS03425 | | redox-regulated ATPase YchF | 0.43 | LRK55_RS02405 | | DEAD/DEAH box helicase | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.68 | LRK54_RS03675 | | redox-regulated ATPase YchF | 0.43 | LRK54_RS02650 | | DEAD/DEAH box helicase | low | > 59 |
| Rhodanobacter sp. FW510-T8 | 0.68 | OKGIIK_10565 | | Ribosome-binding ATPase YchF | 0.42 | OKGIIK_09705 | | ATP-dependent RNA helicase | low | > 52 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.60 | CA264_07495 | | GTP-binding protein YchF | 0.30 | CA264_05910 | | RNA helicase | 0.40 | 33 |
| Fusobacterium nucleatum SB010 | 0.58 | HUW76_08540 | | redox-regulated ATPase YchF | 0.26 | HUW76_10100 | | DEAD/DEAH box helicase | low | > 35 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.58 | ABZR88_RS14155 | | redox-regulated ATPase YchF | 0.27 | ABZR88_RS01495 | | DEAD/DEAH box helicase | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.58 | Echvi_2525 | | GTP-binding protein YchF | 0.30 | Echvi_3056 | | Superfamily II DNA and RNA helicases | — | — |
| Bacteroides ovatus ATCC 8483 | 0.57 | BACOVA_02821 | | GTP-binding protein YchF | 0.27 | BACOVA_00904 | | DEAD/DEAH box helicase | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.57 | BT3116 | | GTP-binding protein (NCBI ptt file) | 0.27 | BT3303 | | ATP-dependent RNA helicase (NCBI ptt file) | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.57 | CA265_RS13275 | | redox-regulated ATPase YchF | 0.27 | CA265_RS15600 | | ATP-dependent RNA helicase | — | — |
| Phocaeicola dorei CL03T12C01 | 0.56 | ABI39_RS05450 | | redox-regulated ATPase YchF | 0.26 | ABI39_RS04950 | | DEAD/DEAH box helicase | 0.46 | 54 |
| Phocaeicola vulgatus CL09T03C04 | 0.56 | HMPREF1058_RS11490 | | redox-regulated ATPase YchF | 0.26 | HMPREF1058_RS11910 | | DEAD/DEAH box helicase | 0.48 | 38 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.53 | DVU1429 | | GTP-binding protein (TIGR) | 0.29 | DVU3310 | deaD | ATP-dependent RNA helicase, DEAD/DEAH family (TIGR) | low | > 55 |
| Bacteroides stercoris CC31F | 0.52 | HMPREF1181_RS02000 | | redox-regulated ATPase YchF | 0.26 | HMPREF1181_RS02175 | | DEAD/DEAH box helicase | low | > 56 |
| Desulfovibrio vulgaris Miyazaki F | 0.51 | DvMF_0234 | | GTP-dependent nucleic acid-binding protein EngD (RefSeq) | 0.31 | DvMF_2125 | | DEAD/DEAH box helicase domain protein (RefSeq) | — | — |
| Mycobacterium tuberculosis H37Rv | 0.43 | Rv1112 | | Probable GTP binding protein | 0.37 | Rv1253 | | Probable cold-shock DeaD-box protein A homolog DeaD (ATP-dependent RNA helicase dead homolog) | low | > 58 |
Not shown: 36 genomes with orthologs for IAI47_11310 only; 3 genomes with orthologs for IAI47_16990 only