Conservation of cofitness between IAI46_08995 and IAI46_08385 in Serratia liquefaciens MT49

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_08995 NAD(P)H:quinone oxidoreductase 1.0 IAI46_08385 putrescine ABC transporter permease PotI 0.46 12
Klebsiella michiganensis M5al 0.84 BWI76_RS10740 NAD(P)H:quinone oxidoreductase 0.84 BWI76_RS09475 putrescine ABC transporter permease PotI low > 92
Enterobacter sp. TBS_079 0.84 MPMX20_01689 NAD(P)H dehydrogenase (quinone) 0.84 MPMX20_01498 Inner membrane ABC transporter permease protein YdcV low > 85
Enterobacter asburiae PDN3 0.83 EX28DRAFT_1923 NAD(P)H:quinone oxidoreductase, type IV 0.85 EX28DRAFT_2096 ABC-type spermidine/putrescine transport system, permease component II 0.49 29
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.83 GFF3296 Flavoprotein WrbA 0.86 GFF761 Putrescine transport system permease protein PotI (TC 3.A.1.11.2) low > 78
Rahnella sp. WP5 0.82 EX31_RS10720 NAD(P)H:quinone oxidoreductase 0.88 EX31_RS09615 putrescine ABC transporter permease PotI low > 89
Escherichia coli ECOR38 0.82 HEPCGN_23485 wrbA NAD(P)H:quinone oxidoreductase 0.80 HEPCGN_02085 potI putrescine ABC transporter permease PotI low > 87
Escherichia coli BW25113 0.82 b1004 wrbA TrpR binding protein WrbA (NCBI) 0.80 b0857 potI putrescine transporter subunit: membrane component of ABC superfamily (NCBI) low > 76
Marinobacter adhaerens HP15 0.82 HP15_2973 flavoprotein wrbA 0.63 HP15_937 spermidine/putrescine ABC transporter, permease protein low > 73
Escherichia coli Nissle 1917 0.82 ECOLIN_RS05235 NAD(P)H:quinone oxidoreductase 0.80 ECOLIN_RS04565 putrescine ABC transporter permease PotI — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.82 OHPLBJKB_02663 NAD(P)H dehydrogenase (quinone) 0.80 OHPLBJKB_02811 Inner membrane ABC transporter permease protein YdcV low > 73
Escherichia fergusonii Becca 0.82 EFB2_03076 NAD(P)H dehydrogenase (quinone) 0.80 EFB2_03204 Inner membrane ABC transporter permease protein YdcV low > 86
Escherichia coli BL21 0.82 ECD_01007 NAD(P)H:quinone oxidoreductase 0.80 ECD_00862 putrescine ABC transporter permease low > 61
Escherichia coli ECOR27 0.82 NOLOHH_21555 wrbA NAD(P)H:quinone oxidoreductase 0.80 NOLOHH_22315 potI putrescine ABC transporter permease PotI low > 75
Escherichia coli ECRC62 0.82 BNILDI_19720 wrbA NAD(P)H:quinone oxidoreductase 0.80 BNILDI_20570 potH putrescine ABC transporter permease PotH low > 75
Pseudomonas stutzeri RCH2 0.81 Psest_1580 NAD(P)H:quinone oxidoreductase, type IV 0.60 Psest_4280 ABC-type spermidine/putrescine transport system, permease component II low > 67
Escherichia coli ECRC100 0.81 OKFHMN_04655 wrbA NAD(P)H:quinone oxidoreductase 0.80 OKFHMN_05945 potI putrescine ABC transporter permease PotI low > 80
Escherichia coli ECRC99 0.81 KEDOAH_23090 wrbA NAD(P)H:quinone oxidoreductase 0.80 KEDOAH_21965 potI putrescine ABC transporter permease PotI — —
Escherichia coli ECRC98 0.81 JDDGAC_08265 wrbA NAD(P)H:quinone oxidoreductase 0.80 JDDGAC_09580 potI putrescine ABC transporter permease PotI low > 86
Escherichia coli ECRC101 0.81 MCAODC_24040 wrbA NAD(P)H:quinone oxidoreductase 0.80 MCAODC_25160 potI putrescine ABC transporter permease PotI low > 87
Pantoea sp. MT58 0.79 IAI47_12550 NAD(P)H:quinone oxidoreductase 0.81 IAI47_13030 putrescine ABC transporter permease PotI low > 76
Escherichia coli ECRC102 0.74 NIAGMN_23195 wrbA NAD(P)H:quinone oxidoreductase 0.80 NIAGMN_03990 potI putrescine ABC transporter permease PotI — —
Burkholderia phytofirmans PsJN 0.68 BPHYT_RS31470 NAD(P)H dehydrogenase (quinone) 0.58 BPHYT_RS23135 putrescine/spermidine ABC transporter permease — —
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_25195 NAD(P)H:quinone oxidoreductase 0.60 AO353_29320 putrescine ABC transporter, permease component (from data) low > 101
Rhodospirillum rubrum S1H 0.64 Rru_A0373 flavodoxin/nitric oxide synthase (NCBI) 0.60 Rru_A1015 Binding-protein-dependent transport systems inner membrane component (NCBI) low > 58
Azospirillum brasilense Sp245 0.59 AZOBR_RS21920 NAD(P)H quinone oxidoreductase 0.58 AZOBR_RS08830 putrescine/spermidine ABC transporter permease low > 97
Azospirillum sp. SherDot2 0.57 MPMX19_05003 NAD(P)H dehydrogenase (quinone) 0.60 MPMX19_04880 Inner membrane ABC transporter permease protein YdcV low > 112
Sinorhizobium meliloti 1021 0.57 SMc00943 TrpR binding protein WrbA 0.54 SMc00773 putrescine ABC transporter permease low > 103
Rhodopseudomonas palustris CGA009 0.54 TX73_004690 NAD(P)H:quinone oxidoreductase 0.50 TX73_021555 ABC transporter permease subunit low > 86
Paraburkholderia sabiae LMG 24235 0.54 QEN71_RS13445 NAD(P)H:quinone oxidoreductase 0.56 QEN71_RS07135 ABC transporter permease subunit low > 153
Caulobacter crescentus NA1000 0.53 CCNA_00833 NAD(P)H:quinone oxidoreductase 0.34 CCNA_03236 spermidine/putrescine transport system permease protein potC low > 66
Caulobacter crescentus NA1000 Δfur 0.53 CCNA_00833 NAD(P)H:quinone oxidoreductase 0.34 CCNA_03236 spermidine/putrescine transport system permease protein potC low > 67
Agrobacterium fabrum C58 0.52 Atu1728 TrpR binding protein WrbA 0.48 Atu0612 ABC transporter, membrane spanning protein low > 89
Rhizobium sp. OAE497 0.51 ABIE40_RS08165 NAD(P)H:quinone oxidoreductase type IV 0.51 ABIE40_RS03280 ABC transporter permease subunit low > 107
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.4188.1 Trp repressor binding protein 0.55 Xcc-8004.2212.1 Putrescine transport system permease protein PotI (TC 3.A.1.11.2) low > 74
Herbaspirillum seropedicae SmR1 0.33 HSERO_RS16550 NAD(P)H quinone oxidoreductase 0.21 HSERO_RS05400 polyamine ABC transporter permease low > 78
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_2023 Flavoprotein WrbA 0.58 PfGW456L13_932 Putrescine transport system permease protein PotI (TC 3.A.1.11.2) low > 87
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_3494 Flavoprotein WrbA 0.60 Pf1N1B4_4350 Putrescine transport system permease protein PotI (TC 3.A.1.11.2) low > 87
Pseudomonas sp. S08-1 0.32 OH686_19025 NAD(P)H:quinone oxidoreductase, type IV 0.61 OH686_11445 Putrescine transport system permease protein PotI low > 80
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS18440 NAD(P)H:quinone oxidoreductase 0.60 PFLU_RS28755 ABC transporter permease subunit low > 109
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_3703 Flavodoxin/nitric oxide synthase 0.60 Psyr_4861 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas fluorescens SBW25 0.31 PFLU_RS18440 NAD(P)H:quinone oxidoreductase 0.60 PFLU_RS28755 ABC transporter permease subunit low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_3703 Flavodoxin/nitric oxide synthase 0.60 Psyr_4861 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas simiae WCS417 0.31 PS417_16400 NAD(P)H-quinone oxidoreductase 0.60 PS417_27105 spermidine/putrescine ABC transporter permease low > 88
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_5714 Flavoprotein WrbA 0.60 Pf6N2E2_4517 Putrescine transport system permease protein PotI (TC 3.A.1.11.2) low > 103
Pseudomonas putida KT2440 0.31 PP_1644 NAD(P)H dehydrogenase (quinone) 0.60 PP_5177 spermidine/putrescine ABC transporter - permease subunit low > 96
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_19015 NAD(P)H-quinone oxidoreductase 0.60 AO356_13175 spermidine/putrescine ABC transporter permease low > 104
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_10795 NAD(P)H:quinone oxidoreductase 0.34 CSW01_07150 spermidine/putrescine ABC transporter permease PotC low > 62
Paraburkholderia graminis OAS925 0.30 ABIE53_002923 NAD(P)H dehydrogenase (quinone) 0.55 ABIE53_002367 putrescine transport system permease protein low > 113
Paraburkholderia bryophila 376MFSha3.1 0.30 H281DRAFT_04482 NAD(P)H dehydrogenase (quinone) 0.55 H281DRAFT_05183 putrescine transport system permease protein low > 103
Ralstonia solanacearum GMI1000 0.29 RS_RS07845 NAD(P)H:quinone oxidoreductase 0.17 RS_RS08745 ABC transporter permease low > 80
Ralstonia solanacearum UW163 0.29 UW163_RS15200 NAD(P)H:quinone oxidoreductase 0.17 UW163_RS14560 ABC transporter permease — —
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS01890 NAD(P)H:quinone oxidoreductase 0.17 RALBFv3_RS01250 ABC transporter permease — —
Ralstonia sp. UNC404CL21Col 0.29 ABZR87_RS13830 NAD(P)H:quinone oxidoreductase 0.19 ABZR87_RS22470 ABC transporter permease low > 80
Ralstonia solanacearum PSI07 0.29 RPSI07_RS15600 NAD(P)H:quinone oxidoreductase 0.17 RPSI07_RS16225 ABC transporter permease low > 81
Variovorax sp. OAS795 0.29 ABID97_RS18920 NAD(P)H:quinone oxidoreductase 0.21 ABID97_RS04045 ABC transporter permease low > 91
Pseudomonas sp. RS175 0.28 PFR28_03233 NAD(P)H dehydrogenase (quinone) 0.60 PFR28_04291 Inner membrane ABC transporter permease protein YdcV low > 88
Castellaniella sp019104865 MT123 0.24 ABCV34_RS15000 NAD(P)H:quinone oxidoreductase 0.56 ABCV34_RS02375 ABC transporter permease subunit low > 48

Not shown: 12 genomes with orthologs for IAI46_08995 only; 24 genomes with orthologs for IAI46_08385 only