Conservation of cofitness between HSERO_RS20770 and HSERO_RS20780 in Herbaspirillum seropedicae SmR1

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS20770 MFS transporter 1.0 HSERO_RS20780 cytochrome C oxidase assembly protein 0.45 5
Ralstonia sp. UNC404CL21Col 0.70 ABZR87_RS06820 cytochrome c oxidase subunit 3 0.64 ABZR87_RS06810 cytochrome c oxidase assembly protein 0.90 3
Ralstonia solanacearum PSI07 0.69 RPSI07_RS22340 cytochrome c oxidase subunit 3 0.65 RPSI07_RS22350 cytochrome c oxidase assembly protein low > 81
Ralstonia solanacearum GMI1000 0.69 RS_RS01805 cytochrome c oxidase subunit 3 0.65 RS_RS01795 cytochrome c oxidase assembly protein low > 80
Ralstonia solanacearum UW163 0.69 UW163_RS02615 cytochrome c oxidase subunit 3 0.64 UW163_RS02625 cytochrome c oxidase assembly protein
Ralstonia solanacearum IBSBF1503 0.69 RALBFv3_RS10965 cytochrome c oxidase subunit 3 0.64 RALBFv3_RS10955 cytochrome c oxidase assembly protein low > 76
Cupriavidus basilensis FW507-4G11 0.68 RR42_RS01895 MFS transporter 0.59 RR42_RS01885 cytochrome C oxidase assembly protein 0.80 4
Paraburkholderia sabiae LMG 24235 0.63 QEN71_RS01520 cytochrome c oxidase subunit 3 0.58 QEN71_RS01510 cytochrome c oxidase assembly protein 0.76 23
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_01990 cytochrome c oxidase subunit 3 0.63 H281DRAFT_01992 cytochrome c oxidase assembly protein subunit 11 low > 103
Burkholderia phytofirmans PsJN 0.61 BPHYT_RS02665 MFS transporter 0.62 BPHYT_RS02655 cytochrome C oxidase assembly protein 0.74 15
Paraburkholderia graminis OAS925 0.61 ABIE53_000678 cytochrome c oxidase subunit 3 0.62 ABIE53_000676 cytochrome c oxidase assembly protein subunit 11 0.54 50
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF693 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) 0.57 GFF691 Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 0.81 2
Acidovorax sp. GW101-3H11 0.61 Ac3H11_3888 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) 0.57 Ac3H11_3890 Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 0.86 1
Variovorax sp. SCN45 0.61 GFF2302 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) 0.53 GFF2300 Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 0.83 5
Variovorax sp. OAS795 0.60 ABID97_RS23940 cytochrome c oxidase subunit 3 0.53 ABID97_RS23950 cytochrome c oxidase assembly protein 0.96 1
Pseudomonas fluorescens SBW25 0.52 PFLU_RS00305 cytochrome c oxidase subunit 3 0.32 PFLU_RS00300 cytochrome c oxidase assembly protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.52 PFLU_RS00305 cytochrome c oxidase subunit 3 0.32 PFLU_RS00300 cytochrome c oxidase assembly protein 0.22 74
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_1857 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) 0.32 Pf1N1B4_1856 Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 low > 87
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_11175 MFS transporter 0.31 AO356_11170 cysteine synthase 0.58 5
Pseudomonas simiae WCS417 0.51 PS417_00315 MFS transporter 0.32 PS417_00310 cysteine synthase 0.33 9
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_4101 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) 0.32 Pf6N2E2_4100 Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 0.36 8
Pseudomonas sp. RS175 0.51 PFR28_04688 Cytochrome c oxidase subunit 3 0.30 PFR28_04689 Cytochrome c oxidase assembly protein CtaG low > 88
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_10845 MFS transporter 0.31 AO353_10840 cysteine synthase low > 101
Pseudomonas fluorescens GW456-L13 0.50 PfGW456L13_611 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) 0.34 PfGW456L13_612 Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 0.35 40
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.4842.1 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) 0.34 Xcc-8004.4843.1 Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 low > 74
Shewanella loihica PV-4 0.48 Shew_0122 cytochrome c oxidase, subunit III (RefSeq) 0.40 Shew_0123 cytochrome C oxidase assembly protein (RefSeq) 0.38 13
Alteromonas macleodii MIT1002 0.47 MIT1002_04032 Cytochrome c oxidase subunit 3 0.38 MIT1002_04033 Cytochrome c oxidase assembly protein CtaG 0.93 6
Pseudomonas stutzeri RCH2 0.47 Psest_4329 Heme/copper-type cytochrome/quinol oxidase, subunit 3 0.35 Psest_4328 Cytochrome oxidase assembly factor low > 67
Pseudomonas putida KT2440 0.45 PP_0106 cytochrome c oxidase subunit 3 0.32 PP_0105 Cytochrome C oxidase assembly protein low > 96
Pseudomonas sp. S08-1 0.45 OH686_12310 Cytochrome c oxidase polypeptide III 0.31 OH686_12315 Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 0.58 26
Marinobacter adhaerens HP15 0.45 HP15_3774 cytochrome c oxidase subunit III 0.34 HP15_3773 cytochrome c oxidase assembly protein CtaG/Cox11 low > 73
Shewanella amazonensis SB2B 0.44 Sama_3486 cytochrome c oxidase subunit III (RefSeq) 0.39 Sama_3485 cytochrome C oxidase assembly protein (RefSeq) 0.50 8
Shewanella oneidensis MR-1 0.42 SO4609 cytochrome c oxidase subunit III (NCBI ptt file) 0.38 SO4608 coxG cytochrome c oxidase assembly protein coxG (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.41 Shewana3_3994 cytochrome c oxidase, subunit III (RefSeq) 0.39 Shewana3_3993 cytochrome C oxidase assembly protein (RefSeq) low > 73
Kangiella aquimarina DSM 16071 0.40 B158DRAFT_0134 Heme/copper-type cytochrome/quinol oxidase, subunit 3 0.36 B158DRAFT_0135 Cytochrome oxidase assembly factor 0.94 1
Brevundimonas sp. GW460-12-10-14-LB2 0.34 A4249_RS00135 cytochrome c oxidase subunit 3 0.26 A4249_RS00120 cytochrome c oxidase assembly protein 0.81 1
Rhizobium sp. OAE497 0.33 ABIE40_RS04085 cytochrome c oxidase subunit 3 0.27 ABIE40_RS04080 cytochrome c oxidase assembly protein 0.91 4
Agrobacterium fabrum C58 0.32 Atu0771 cytochrome c oxidase subunit III 0.30 Atu0770 cytochrome C oxidase assembly protein 0.78 1
Magnetospirillum magneticum AMB-1 0.32 AMB_RS10950 cytochrome c oxidase subunit 3 0.27 AMB_RS10955 cytochrome c oxidase assembly protein low > 64
Rhodopseudomonas palustris CGA009 0.31 TX73_004310 cytochrome c oxidase subunit 3 0.29 TX73_004305 cytochrome c oxidase assembly protein 0.85 12
Dinoroseobacter shibae DFL-12 0.30 Dshi_1144 cytochrome c oxidase subunit III (RefSeq) 0.27 Dshi_1143 cytochrome c oxidase assembly protein CtaG/Cox11 (RefSeq)
Azospirillum brasilense Sp245 0.30 AZOBR_RS10570 cytochrome B562 0.32 AZOBR_RS10575 cytochrome C oxidase assembly protein 0.60 1
Sinorhizobium meliloti 1021 0.30 SMc00013 cytochrome C oxidase subunit III transmembrane protein 0.30 SMc00012 cytochrome C oxidase assembly protein 0.33 32
Bosea sp. OAE506 0.28 ABIE41_RS22970 cytochrome c oxidase subunit 3 0.27 ABIE41_RS22965 cytochrome c oxidase assembly protein 0.87 2
Caulobacter crescentus NA1000 Δfur 0.28 CCNA_03513 cytochrome c oxidase subunit III coxC 0.26 CCNA_03514 cytochrome c oxidase assembly protein ctaG low > 67
Caulobacter crescentus NA1000 0.28 CCNA_03513 cytochrome c oxidase subunit III coxC 0.26 CCNA_03514 cytochrome c oxidase assembly protein ctaG 0.97 2
Azospirillum sp. SherDot2 0.27 MPMX19_00889 Cytochrome c oxidase subunit 3 0.28 MPMX19_00888 Cytochrome c oxidase assembly protein CtaG low > 112
Sphingomonas koreensis DSMZ 15582 0.26 Ga0059261_2002 Heme/copper-type cytochrome/quinol oxidase, subunit 3 0.27 Ga0059261_2003 Cytochrome oxidase assembly factor 0.71 9
Phaeobacter inhibens DSM 17395 0.26 PGA1_c06290 cytochrome c oxidase subunit 3 0.28 PGA1_c06280 cytochrome c oxidase assembly protein CtaG

Not shown: 6 genomes with orthologs for HSERO_RS20770 only; 2 genomes with orthologs for HSERO_RS20780 only