Conservation of cofitness between HSERO_RS12590 and HSERO_RS19450 in Herbaspirillum seropedicae SmR1

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS12590 ethanolamin permease 1.0 HSERO_RS19450 indole-3-glycerol-phosphate synthase 0.47 10
Paraburkholderia sabiae LMG 24235 0.81 QEN71_RS00030 ethanolamine permease 0.61 QEN71_RS27565 indole-3-glycerol phosphate synthase TrpC low > 153
Paraburkholderia bryophila 376MFSha3.1 0.80 H281DRAFT_02303 ethanolamine:proton symporter, EAT family 0.55 H281DRAFT_05712 indole-3-glycerol phosphate synthase low > 103
Burkholderia phytofirmans PsJN 0.80 BPHYT_RS00100 ethanolamine permease 0.55 BPHYT_RS17405 indole-3-glycerol phosphate synthase low > 109
Paraburkholderia graminis OAS925 0.80 ABIE53_000359 ethanolamine permease 0.56 ABIE53_003643 indole-3-glycerol phosphate synthase — —
Cupriavidus basilensis FW507-4G11 0.77 RR42_RS21315 ethanolamine permease 0.71 RR42_RS18310 indole-3-glycerol-phosphate synthase low > 128
Azospirillum sp. SherDot2 0.73 MPMX19_05701 Putrescine transporter PotE 0.42 MPMX19_01014 Indole-3-glycerol phosphate synthase low > 112
Rhodospirillum rubrum S1H 0.72 Rru_A1030 Amino acid permease-associated region (NCBI) 0.40 Rru_A1897 Indole-3-glycerol-phosphate synthase (NCBI) low > 58
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_4978 Ethanolamine permease 0.52 Pf6N2E2_4826 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 103
Pseudomonas sp. RS175 0.69 PFR28_03886 putative amino acid permease YhdG 0.52 PFR28_04043 Indole-3-glycerol phosphate synthase — —
Pseudomonas fluorescens GW456-L13 0.69 PfGW456L13_1341 Ethanolamine permease 0.50 PfGW456L13_1222 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 87
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_15220 ethanolamine permease 0.51 AO356_14440 indole-3-glycerol-phosphate synthase low > 104
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_2672 Ethanolamine permease 0.50 Pf1N1B4_2549 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 87
Pseudomonas fluorescens FW300-N2E3 0.69 AO353_06565 ethanolamine permease 0.50 AO353_07210 indole-3-glycerol-phosphate synthase low > 101
Pseudomonas sp. S08-1 0.68 OH686_07700 ethanolamine permease 0.53 OH686_15140 Indole-3-glycerol phosphate synthase low > 80
Pseudomonas fluorescens SBW25 0.68 PFLU_RS08215 ethanolamine permease 0.49 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC low > 109
Pseudomonas fluorescens SBW25-INTG 0.68 PFLU_RS08215 ethanolamine permease 0.49 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC low > 109
Pseudomonas simiae WCS417 0.68 PS417_08275 ethanolamin permease 0.50 PS417_25710 indole-3-glycerol-phosphate synthase low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_1835 ethanolamine:proton symporter, EAT family 0.50 Psyr_4579 indole-3-glycerol phosphate synthase low > 86
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_1835 ethanolamine:proton symporter, EAT family 0.50 Psyr_4579 indole-3-glycerol phosphate synthase low > 86
Variovorax sp. OAS795 0.68 ABID97_RS19505 ethanolamine permease 0.61 ABID97_RS05280 indole-3-glycerol phosphate synthase TrpC low > 91
Xanthomonas campestris pv. campestris strain 8004 0.65 Xcc-8004.2300.1 Ethanolamine permease 0.51 Xcc-8004.622.1 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.38 CA265_RS24870 ethanolamine permease 0.35 CA265_RS22900 indole-3-glycerol phosphate synthase low > 88
Acinetobacter radioresistens SK82 0.27 MPMX26_01769 putative amino acid permease YhdG 0.46 MPMX26_00983 Indole-3-glycerol phosphate synthase — —
Pseudomonas putida KT2440 0.24 PP_0544 Ethanolamine transporter 0.49 PP_0422 Indole-3-glycerol phosphate synthase low > 96
Agrobacterium fabrum C58 0.24 Atu2143 ABC transporter, membrane spanning protein (amino acid) 0.45 Atu1688 indole-3-glycerol-phosphate synthase low > 89
Pseudomonas stutzeri RCH2 0.23 Psest_0670 ethanolamine permease 0.52 Psest_3647 Indole-3-glycerol phosphate synthase low > 67
Sinorhizobium meliloti 1021 0.14 SMc02616 permease transmembrane protein 0.42 SMc00236 Indole-3-glycerol phosphate synthase low > 103
Ralstonia solanacearum IBSBF1503 0.12 RALBFv3_RS01725 amino acid permease 0.66 RALBFv3_RS06505 indole-3-glycerol phosphate synthase TrpC — —
Ralstonia solanacearum UW163 0.12 UW163_RS15035 amino acid permease 0.66 UW163_RS07120 indole-3-glycerol phosphate synthase TrpC — —
Ralstonia sp. UNC404CL21Col 0.12 ABZR87_RS13545 amino acid permease 0.67 ABZR87_RS02160 indole-3-glycerol phosphate synthase TrpC low > 80
Ralstonia solanacearum GMI1000 0.12 RS_RS08000 amino acid permease 0.65 RS_RS14450 Indole-3-glycerol phosphate synthase 1 — —
Ralstonia solanacearum PSI07 0.11 RPSI07_RS15760 amino acid permease 0.65 RPSI07_RS10735 indole-3-glycerol phosphate synthase TrpC — —
Rhodanobacter denitrificans FW104-10B01 0.11 LRK54_RS01520 amino acid permease 0.46 LRK54_RS11570 indole-3-glycerol phosphate synthase TrpC low > 59
Rhodanobacter denitrificans MT42 0.11 LRK55_RS01310 amino acid permease 0.47 LRK55_RS11300 indole-3-glycerol phosphate synthase TrpC low > 63
Dyella japonica UNC79MFTsu3.2 0.10 ABZR86_RS16130 amino acid permease 0.53 ABZR86_RS12065 indole-3-glycerol phosphate synthase TrpC low > 74
Lysobacter sp. OAE881 0.10 ABIE51_RS13260 amino acid permease 0.54 ABIE51_RS04190 indole-3-glycerol phosphate synthase TrpC low > 62
Caulobacter crescentus NA1000 0.10 CCNA_00435 L-proline transporter (from data) 0.40 CCNA_01976 Indole-3-glycerol phosphate synthase low > 66
Caulobacter crescentus NA1000 Δfur 0.10 CCNA_00435 amino acid transporter 0.40 CCNA_01976 Indole-3-glycerol phosphate synthase low > 67
Rhodanobacter sp. FW510-T8 0.10 OKGIIK_05010 potE amino acid permease 0.50 OKGIIK_12280 trpC indole-3-glycerol phosphate synthase TrpC low > 52
Rhodopseudomonas palustris CGA009 0.10 TX73_003040 amino acid permease 0.46 TX73_014985 indole-3-glycerol phosphate synthase TrpC — —
Sphingomonas koreensis DSMZ 15582 0.09 Ga0059261_1053 amino acid/polyamine/organocation transporter, APC superfamily (TC 2.A.3) 0.44 Ga0059261_0930 indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.54 24
Brevundimonas sp. GW460-12-10-14-LB2 0.09 A4249_RS05420 amino acid permease 0.39 A4249_RS06175 indole-3-glycerol phosphate synthase TrpC — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.08 ABZR88_RS11630 amino acid permease 0.32 ABZR88_RS16605 indole-3-glycerol phosphate synthase TrpC — —
Desulfovibrio vulgaris Hildenborough JW710 0.07 DVU2280 amino acid permease family protein (TIGR) 0.21 DVU0468 trpC indole-3-glycerol phosphate synthase (TIGR) low > 55
Bosea sp. OAE506 0.07 ABIE41_RS20970 APC family permease 0.43 ABIE41_RS17425 indole-3-glycerol phosphate synthase TrpC — —
Castellaniella sp019104865 MT123 0.07 ABCV34_RS10320 amino acid permease 0.58 ABCV34_RS10310 indole-3-glycerol phosphate synthase TrpC — —

Not shown: 19 genomes with orthologs for HSERO_RS12590 only; 17 genomes with orthologs for HSERO_RS19450 only