Conservation of cofitness between HSERO_RS16435 and HSERO_RS15630 in Herbaspirillum seropedicae SmR1

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS16435 LOG family protein 1.0 HSERO_RS15630 exodeoxyribonuclease III 0.34 8
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS24290 TIGR00730 family Rossman fold protein 0.64 QEN71_RS05680 exodeoxyribonuclease III low > 153
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_04542 hypothetical protein 0.64 H281DRAFT_00456 Exodeoxyribonuclease III low > 103
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS06500 LOG family protein 0.65 BPHYT_RS12925 exodeoxyribonuclease III low > 109
Paraburkholderia graminis OAS925 0.57 ABIE53_001565 uncharacterized protein (TIGR00730 family) 0.65 ABIE53_002802 exodeoxyribonuclease-3 low > 113
Pseudomonas sp. S08-1 0.54 OH686_16655 Lysine decarboxylase family 0.33 OH686_23775 exodeoxyribonuclease III low > 80
Ralstonia solanacearum GMI1000 0.54 RS_RS10470 TIGR00730 family Rossman fold protein 0.63 RS_RS08025 exodeoxyribonuclease III low > 80
Bosea sp. OAE506 0.54 ABIE41_RS21595 TIGR00730 family Rossman fold protein 0.38 ABIE41_RS15705 exodeoxyribonuclease III low > 77
Ralstonia solanacearum PSI07 0.53 RPSI07_RS14205 TIGR00730 family Rossman fold protein 0.63 RPSI07_RS15785 exodeoxyribonuclease III low > 81
Pseudomonas putida KT2440 0.53 PP_4871 putative lysine decarboxylase family protein 0.34 PP_2707 putative Exodeoxyribonuclease III low > 96
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_132 Lysine decarboxylase family 0.34 PfGW456L13_3967 Exodeoxyribonuclease III (EC 3.1.11.2) low > 87
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_3589 Lysine decarboxylase family 0.34 Pf6N2E2_2237 Exodeoxyribonuclease III (EC 3.1.11.2) low > 103
Pseudomonas sp. RS175 0.53 PFR28_05145 'Putative cytokinin riboside 5'-monophosphate phosphoribohydrolase' transl_table=11 0.35 PFR28_01207 Exodeoxyribonuclease III low > 88
Ralstonia solanacearum IBSBF1503 0.52 RALBFv3_RS03100 TIGR00730 family Rossman fold protein 0.63 RALBFv3_RS01700 exodeoxyribonuclease III low > 76
Pseudomonas fluorescens FW300-N2C3 0.52 AO356_08535 LOG family protein 0.35 AO356_01850 exodeoxyribonuclease III low > 104
Ralstonia solanacearum UW163 0.52 UW163_RS10625 TIGR00730 family Rossman fold protein 0.63 UW163_RS15010 exodeoxyribonuclease III — —
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_1389 Lysine decarboxylase family 0.33 Pf1N1B4_38 Exodeoxyribonuclease III (EC 3.1.11.2) low > 87
Ralstonia sp. UNC404CL21Col 0.52 ABZR87_RS15005 TIGR00730 family Rossman fold protein 0.64 ABZR87_RS13495 exodeoxyribonuclease III low > 80
Azospirillum brasilense Sp245 0.52 AZOBR_RS14105 LOG family protein 0.41 AZOBR_RS15540 exodeoxyribonuclease III low > 97
Dechlorosoma suillum PS 0.51 Dsui_0979 TIGR00730 family protein 0.64 Dsui_0044 exodeoxyribonuclease III low > 51
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS05385 LOG family protein 0.67 RR42_RS07325 exodeoxyribonuclease III low > 128
Pseudomonas stutzeri RCH2 0.50 Psest_3243 TIGR00730 family protein 0.37 Psest_1187 exodeoxyribonuclease III low > 67
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.3415.1 Lysine decarboxylase family 0.53 Xcc-8004.5140.1 Exodeoxyribonuclease III (EC 3.1.11.2) low > 74
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_13300 LOG family protein 0.27 AO353_27875 exonuclease III low > 101
Lysobacter sp. OAE881 0.49 ABIE51_RS08970 TIGR00730 family Rossman fold protein 0.55 ABIE51_RS01755 exodeoxyribonuclease III low > 62
Serratia liquefaciens MT49 0.49 IAI46_14285 TIGR00730 family Rossman fold protein 0.29 IAI46_14290 exodeoxyribonuclease III low > 86
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS05935 TIGR00730 family Rossman fold protein 0.56 ABZR86_RS14930 exodeoxyribonuclease III low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.47 ABZR88_RS10320 TIGR00730 family Rossman fold protein 0.35 ABZR88_RS19760 exodeoxyribonuclease III low > 71
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_05925 TIGR00730 family Rossman fold protein 0.55 OKGIIK_15390 xth exodeoxyribonuclease III low > 52
Marinobacter adhaerens HP15 0.47 HP15_3835 conserved hypothetical protein 0.28 HP15_1776 exonuclease III low > 73
Acidovorax sp. GW101-3H11 0.46 Ac3H11_519 Lysine decarboxylase family 0.60 Ac3H11_4433 Exodeoxyribonuclease III (EC 3.1.11.2) — —
Rhodanobacter denitrificans MT42 0.46 LRK55_RS00740 TIGR00730 family Rossman fold protein 0.52 LRK55_RS08390 exodeoxyribonuclease III low > 63
Rhodanobacter denitrificans FW104-10B01 0.46 LRK54_RS00965 TIGR00730 family Rossman fold protein 0.52 LRK54_RS08625 exodeoxyribonuclease III low > 59
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF4273 Lysine decarboxylase family 0.59 GFF5268 Exodeoxyribonuclease III (EC 3.1.11.2) low > 90
Dickeya dadantii 3937 0.45 DDA3937_RS17825 TIGR00730 family Rossman fold protein 0.29 DDA3937_RS10310 exodeoxyribonuclease III low > 74
Magnetospirillum magneticum AMB-1 0.45 AMB_RS14390 TIGR00730 family Rossman fold protein 0.41 AMB_RS12755 exodeoxyribonuclease III — —
Dickeya dianthicola ME23 0.44 DZA65_RS18910 TIGR00730 family Rossman fold protein 0.29 DZA65_RS10795 exodeoxyribonuclease III low > 75
Dickeya dianthicola 67-19 0.44 HGI48_RS17765 TIGR00730 family Rossman fold protein 0.28 HGI48_RS10320 exodeoxyribonuclease III low > 71
Pedobacter sp. GW460-11-11-14-LB5 0.43 CA265_RS10665 Rossman fold protein, TIGR00730 family 0.34 CA265_RS16670 exodeoxyribonuclease III low > 88
Variovorax sp. OAS795 0.43 ABID97_RS14855 TIGR00730 family Rossman fold protein 0.61 ABID97_RS09955 exodeoxyribonuclease III low > 91
Sphingomonas koreensis DSMZ 15582 0.43 Ga0059261_2416 TIGR00730 family protein 0.32 Ga0059261_3499 exodeoxyribonuclease III low > 68
Variovorax sp. SCN45 0.42 GFF1152 Lysine decarboxylase family 0.61 GFF3064 Exodeoxyribonuclease III (EC 3.1.11.2) low > 127
Dinoroseobacter shibae DFL-12 0.40 Dshi_1767 hypothetical protein (RefSeq) 0.36 Dshi_1886 exodeoxyribonuclease III Xth (RefSeq) low > 64
Azospirillum sp. SherDot2 0.38 MPMX19_06138 Putative cytokinin riboside 5'-monophosphate phosphoribohydrolase 0.42 MPMX19_04331 Exodeoxyribonuclease low > 112
Castellaniella sp019104865 MT123 0.36 ABCV34_RS10940 TIGR00730 family Rossman fold protein 0.62 ABCV34_RS03115 exodeoxyribonuclease III low > 48
Phaeobacter inhibens DSM 17395 0.33 PGA1_c19080 TIGR00730 family protein 0.35 PGA1_c11070 exodeoxyribonuclease III low > 62
Caulobacter crescentus NA1000 Δfur 0.29 CCNA_01372 lysine decarboxylase family 0.41 CCNA_02090 exodeoxyribonuclease III — —
Caulobacter crescentus NA1000 0.29 CCNA_01372 lysine decarboxylase family 0.41 CCNA_02090 exodeoxyribonuclease III low > 66

Not shown: 10 genomes with orthologs for HSERO_RS16435 only; 41 genomes with orthologs for HSERO_RS15630 only