Conservation of cofitness between HSERO_RS03430 and HSERO_RS13935 in Herbaspirillum seropedicae SmR1

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS03430 glutathione S-transferase 1.0 HSERO_RS13935 DNAase 0.30 17
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF2520 Glutathione S-transferase family protein 0.55 GFF744 Putative deoxyribonuclease YjjV low > 90
Acidovorax sp. GW101-3H11 0.65 Ac3H11_1231 Glutathione S-transferase family protein 0.46 Ac3H11_1737 Putative deoxyribonuclease YjjV 0.40 46
Ralstonia solanacearum IBSBF1503 0.65 RALBFv3_RS05725 glutathione S-transferase 0.45 RALBFv3_RS14760 TatD family deoxyribonuclease low > 76
Ralstonia solanacearum UW163 0.65 UW163_RS07900 glutathione S-transferase 0.45 UW163_RS12230 TatD family deoxyribonuclease — —
Ralstonia solanacearum PSI07 0.65 RPSI07_RS11575 glutathione S-transferase 0.46 RPSI07_RS18600 TatD family deoxyribonuclease low > 81
Ralstonia solanacearum GMI1000 0.65 RS_RS13615 glutathione S-transferase 0.47 RS_RS05570 TatD family deoxyribonuclease low > 80
Paraburkholderia bryophila 376MFSha3.1 0.65 H281DRAFT_04246 glutathione S-transferase 0.55 H281DRAFT_00492 TatD DNase family protein low > 103
Variovorax sp. OAS795 0.65 ABID97_RS02045 glutathione S-transferase N-terminal domain-containing protein 0.48 ABID97_RS22725 TatD family hydrolase low > 91
Paraburkholderia graminis OAS925 0.64 ABIE53_003486 glutathione S-transferase 0.54 ABIE53_002767 TatD DNase family protein low > 113
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS01320 glutathione S-transferase 0.47 ABZR87_RS10420 TatD family hydrolase low > 80
Variovorax sp. SCN45 0.64 GFF5432 Glutathione S-transferase family protein 0.45 GFF6080 Putative deoxyribonuclease YjjV low > 127
Burkholderia phytofirmans PsJN 0.63 BPHYT_RS16570 glutathione S-transferase 0.55 BPHYT_RS12705 DNAase low > 109
Paraburkholderia sabiae LMG 24235 0.63 QEN71_RS26755 glutathione S-transferase N-terminal domain-containing protein 0.62 QEN71_RS05855 TatD family hydrolase low > 153
Cupriavidus basilensis FW507-4G11 0.57 RR42_RS17460 glutathione S-transferase 0.52 RR42_RS06110 DNAase — —
Castellaniella sp019104865 MT123 0.57 ABCV34_RS06795 glutathione S-transferase 0.52 ABCV34_RS04985 TatD family hydrolase low > 48
Dechlorosoma suillum PS 0.55 Dsui_3332 glutathione S-transferase 0.45 Dsui_0503 Mg-dependent DNase low > 51
Pseudomonas simiae WCS417 0.34 PS417_26125 glutathione S-transferase 0.35 PS417_03955 hydrolase TatD low > 88
Enterobacter asburiae PDN3 0.34 EX28DRAFT_3846 Glutathione S-transferase 0.35 EX28DRAFT_3587 Mg-dependent DNase — —
Pseudomonas fluorescens SBW25 0.34 PFLU_RS27755 glutathione S-transferase 0.35 PFLU_RS04000 TatD family hydrolase low > 109
Pseudomonas fluorescens SBW25-INTG 0.34 PFLU_RS27755 glutathione S-transferase 0.35 PFLU_RS04000 TatD family hydrolase low > 109
Enterobacter sp. TBS_079 0.33 MPMX20_00139 putative GST-like protein YibF 0.33 MPMX20_00677 putative metal-dependent hydrolase YjjV low > 85
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_07580 glutathione S-transferase 0.35 AO353_05495 hydrolase TatD low > 101
Klebsiella michiganensis M5al 0.33 BWI76_RS27145 glutathione S-transferase 0.32 BWI76_RS04120 metal-dependent hydrolase low > 92
Escherichia coli ECRC99 0.32 KEDOAH_12310 yibF glutathione S-transferase 0.33 KEDOAH_16885 yjjV metal-dependent hydrolase — —
Escherichia coli ECRC62 0.32 BNILDI_03795 yibF glutathione S-transferase 0.34 BNILDI_08020 tatD metal-dependent hydrolase low > 75
Escherichia coli ECRC98 0.32 JDDGAC_19470 yibF glutathione S-transferase 0.33 JDDGAC_14855 yjjV metal-dependent hydrolase low > 86
Escherichia coli BW25113 0.32 b3592 yibF predicted glutathione S-transferase (NCBI) 0.34 b4378 yjjV predicted DNase (NCBI) low > 76
Escherichia coli ECRC100 0.32 OKFHMN_15840 yibF glutathione S-transferase 0.33 OKFHMN_11260 yjjV metal-dependent hydrolase low > 80
Escherichia fergusonii Becca 0.32 EFB2_00217 putative GST-like protein YibF 0.34 EFB2_04068 putative metal-dependent hydrolase YjjV low > 86
Escherichia coli ECRC101 0.32 MCAODC_06355 yibF glutathione S-transferase 0.33 MCAODC_01775 yjjV metal-dependent hydrolase 0.48 19
Escherichia coli Nissle 1917 0.32 ECOLIN_RS20520 glutathione S-transferase 0.34 ECOLIN_RS25130 metal-dependent hydrolase low > 55
Escherichia coli ECRC102 0.32 NIAGMN_13600 yibF glutathione S-transferase 0.33 NIAGMN_09110 yjjV metal-dependent hydrolase — —
Escherichia coli BL21 0.32 ECD_03447 glutathione S-transferase-like protein 0.34 ECD_04254 putative DNase low > 61
Escherichia coli ECOR27 0.32 NOLOHH_07735 yibF glutathione S-transferase 0.34 NOLOHH_03580 yjjV metal-dependent hydrolase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_00111 putative GST-like protein YibF 0.33 OHPLBJKB_03683 putative metal-dependent hydrolase YjjV low > 73
Rahnella sp. WP5 0.32 EX31_RS05755 glutathione S-transferase 0.26 EX31_RS04070 deoxyribonuclease YjjV low > 89
Serratia liquefaciens MT49 0.32 IAI46_00235 glutathione S-transferase 0.33 IAI46_02900 TatD family hydrolase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.32 GFF419 Uncharacterized GST-like protein yibF 0.31 GFF1040 Putative deoxyribonuclease YjjV low > 78
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_2469 Glutathione S-transferase family protein 0.35 Pf1N1B4_1148 Putative deoxyribonuclease YjjV low > 87
Pseudomonas sp. RS175 0.31 PFR28_04119 putative GST-like protein YibF 0.34 PFR28_00103 putative metal-dependent hydrolase YjjV low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_4727 glutathione S-transferase, putative 0.34 Psyr_0819 TatD-related deoxyribonuclease low > 86
Pantoea sp. MT58 0.31 IAI47_18755 glutathione S-transferase 0.31 IAI47_03395 metal-dependent hydrolase low > 76
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_4727 glutathione S-transferase, putative 0.34 Psyr_0819 TatD-related deoxyribonuclease low > 86
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_14050 glutathione S-transferase 0.35 AO356_07345 hydrolase TatD low > 104
Pseudomonas fluorescens FW300-N2E2 0.30 Pf6N2E2_4742 Glutathione S-transferase family protein 0.36 Pf6N2E2_3341 Putative deoxyribonuclease YjjV low > 103
Pseudomonas sp. S08-1 0.30 OH686_14870 Glutathione S-transferase family protein 0.36 OH686_16550 Putative deoxyribonuclease YjjV low > 80
Pseudomonas fluorescens GW456-L13 0.29 PfGW456L13_1130 Glutathione S-transferase family protein 0.36 PfGW456L13_5078 Putative deoxyribonuclease YjjV low > 87
Pseudomonas putida KT2440 0.27 PP_0335 Glutathione S-transferase family protein 0.32 PP_0791 putative hydrolase low > 96
Kangiella aquimarina DSM 16071 0.22 B158DRAFT_0171 Glutathione S-transferase 0.34 B158DRAFT_2240 Mg-dependent DNase low > 40
Dyella japonica UNC79MFTsu3.2 0.21 ABZR86_RS14540 glutathione S-transferase family protein 0.32 ABZR86_RS06375 TatD family hydrolase low > 74
Shewanella oneidensis MR-1 0.20 SO0746 glutathione S-transferase family protein (NCBI ptt file) 0.26 SO1213 hydrolase, TatD family (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.20 Shewana3_3519 glutathione S-transferase domain-containing protein (RefSeq) 0.26 Shewana3_1038 TatD-related deoxyribonuclease (RefSeq) low > 73
Pseudomonas stutzeri RCH2 0.18 Psest_0868 Glutathione S-transferase 0.34 Psest_0728 hydrolase, TatD family low > 67
Alteromonas macleodii MIT1002 0.18 MIT1002_03161 putative glutathione S-transferase 0.23 MIT1002_02710 putative deoxyribonuclease YjjV low > 70
Vibrio cholerae E7946 ATCC 55056 0.16 CSW01_17155 glutathione S-transferase 0.30 CSW01_11925 TatD family deoxyribonuclease low > 62
Marinobacter adhaerens HP15 0.14 HP15_3369 glutathione S-transferase-like protein 0.28 HP15_542 TatD-related deoxyribonuclease low > 73

Not shown: 14 genomes with orthologs for HSERO_RS03430 only; 12 genomes with orthologs for HSERO_RS13935 only