Conservation of cofitness between HSERO_RS08070 and HSERO_RS12655 in Herbaspirillum seropedicae SmR1

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS08070 endonuclease IV 1.0 HSERO_RS12655 pirin 0.34 12
Ralstonia solanacearum PSI07 0.76 RPSI07_RS19265 endonuclease III 0.52 RPSI07_RS22290 pirin family protein low > 81
Ralstonia solanacearum GMI1000 0.75 RS_RS04975 endonuclease III 0.53 RS_RS01855 pirin family protein low > 80
Burkholderia phytofirmans PsJN 0.74 BPHYT_RS06080 endonuclease IV 0.52 BPHYT_RS15980 pirin low > 109
Marinobacter adhaerens HP15 0.74 HP15_1285 endonuclease III 0.41 HP15_1408 pirin domain protein low > 73
Ralstonia solanacearum UW163 0.74 UW163_RS11660 endonuclease III 0.52 UW163_RS02565 pirin family protein — —
Paraburkholderia graminis OAS925 0.74 ABIE53_001423 endonuclease-3 0.51 ABIE53_003369 redox-sensitive bicupin YhaK (pirin superfamily) low > 113
Ralstonia solanacearum IBSBF1503 0.74 RALBFv3_RS14195 endonuclease III 0.52 RALBFv3_RS11015 pirin family protein low > 76
Ralstonia sp. UNC404CL21Col 0.74 ABZR87_RS09915 endonuclease III 0.52 ABZR87_RS06870 pirin family protein low > 80
Paraburkholderia bryophila 376MFSha3.1 0.73 H281DRAFT_00293 DNA-(apurinic or apyrimidinic site) lyase /endonuclease III 0.51 H281DRAFT_04132 hypothetical protein low > 103
Cupriavidus basilensis FW507-4G11 0.73 RR42_RS05970 endonuclease III 0.50 RR42_RS01935 pirin low > 128
Pseudomonas sp. S08-1 0.73 OH686_03910 endonuclease III 0.40 OH686_00425 Pirin low > 80
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_5594 Endonuclease III (EC 4.2.99.18) 0.40 Pf6N2E2_5867 Pirin low > 103
Dyella japonica UNC79MFTsu3.2 0.72 ABZR86_RS08185 endonuclease III 0.42 ABZR86_RS00550 pirin family protein low > 74
Pseudomonas fluorescens FW300-N2E3 0.72 AO353_04085 endonuclease III 0.40 AO353_01770 pirin low > 101
Paraburkholderia sabiae LMG 24235 0.72 QEN71_RS24560 endonuclease III 0.53 QEN71_RS02725 pirin family protein low > 153
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_739 Endonuclease III (EC 4.2.99.18) 0.41 Pf1N1B4_3693 Pirin low > 87
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_18345 endonuclease III 0.39 AO356_19755 pirin low > 104
Pseudomonas sp. RS175 0.71 PFR28_03349 Endonuclease III 0.40 PFR28_03084 hypothetical protein low > 88
Kangiella aquimarina DSM 16071 0.71 B158DRAFT_2365 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18)/endonuclease III (EC 3.2.2.-) 0.41 B158DRAFT_1709 Pirin-related protein low > 40
Serratia liquefaciens MT49 0.71 IAI46_11455 endonuclease III 0.27 IAI46_14920 pirin family protein low > 86
Pseudomonas simiae WCS417 0.71 PS417_05655 endonuclease III 0.41 PS417_08955 pimeloyl-CoA dehydrogenase low > 88
Pseudomonas putida KT2440 0.71 PP_1092 DNA glycosylase/apyrimidinic (AP) lyase specific for damaged pyrimidinic sites 0.41 PP_4177 conserved protein of unknown function low > 96
Pseudomonas fluorescens SBW25 0.71 PFLU_RS05740 endonuclease III 0.39 PFLU_RS09015 pirin family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.71 PFLU_RS05740 endonuclease III 0.39 PFLU_RS09015 pirin family protein low > 109
Acinetobacter radioresistens SK82 0.70 MPMX26_02306 Endonuclease III 0.29 MPMX26_00075 hypothetical protein low > 36
Pseudomonas fluorescens GW456-L13 0.70 PfGW456L13_1753 Endonuclease III (EC 4.2.99.18) 0.41 PfGW456L13_4256 Pirin low > 87
Xanthomonas campestris pv. campestris strain 8004 0.70 Xcc-8004.3350.1 Endonuclease III (EC 4.2.99.18) 0.43 Xcc-8004.1761.1 Pirin-related protein low > 74
Rhodanobacter denitrificans MT42 0.69 LRK55_RS01640 endonuclease III 0.42 LRK55_RS14505 pirin family protein low > 63
Rhodanobacter sp. FW510-T8 0.69 OKGIIK_04675 nth endonuclease III 0.41 OKGIIK_03615 yhaK Pirin low > 52
Rhodanobacter denitrificans FW104-10B01 0.69 LRK54_RS01850 endonuclease III 0.42 LRK54_RS14790 pirin family protein low > 59
Variovorax sp. OAS795 0.68 ABID97_RS17315 endonuclease III 0.47 ABID97_RS17995 pirin family protein low > 91
Variovorax sp. SCN45 0.68 GFF418 Endonuclease III (EC 4.2.99.18) 0.48 GFF586 Pirin low > 127
Shewanella amazonensis SB2B 0.68 Sama_1836 endonuclease III (RefSeq) 0.26 Sama_3541 pirin-like protein (RefSeq) low > 62
Hydrogenophaga sp. GW460-11-11-14-LB1 0.67 GFF4003 Endonuclease III (EC 4.2.99.18) 0.38 GFF1940 Pirin-related protein low > 90
Shewanella sp. ANA-3 0.67 Shewana3_2174 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III (RefSeq) 0.25 Shewana3_0061 pirin domain-containing protein (RefSeq) low > 73
Acidovorax sp. GW101-3H11 0.66 Ac3H11_1010 Endonuclease III (EC 4.2.99.18) 0.47 Ac3H11_4155 Pirin-related protein low > 79
Lysobacter sp. OAE881 0.66 ABIE51_RS07560 endonuclease III 0.45 ABIE51_RS14340 pirin family protein low > 62
Castellaniella sp019104865 MT123 0.61 ABCV34_RS08465 endonuclease III 0.42 ABCV34_RS05160 pirin family protein low > 48
Azospirillum brasilense Sp245 0.60 AZOBR_RS01565 endonuclease III 0.49 AZOBR_RS03065 pirin low > 97
Azospirillum sp. SherDot2 0.59 MPMX19_02500 Endonuclease III 0.42 MPMX19_04837 hypothetical protein low > 112
Sphingomonas koreensis DSMZ 15582 0.57 Ga0059261_2546 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18)/endonuclease III (EC 3.2.2.-) 0.42 Ga0059261_1276 Pirin-related protein low > 68
Bosea sp. OAE506 0.57 ABIE41_RS03410 endonuclease III 0.46 ABIE41_RS22210 pirin family protein low > 77
Dinoroseobacter shibae DFL-12 0.56 Dshi_3023 endonuclease III (RefSeq) 0.42 Dshi_1817 Pirin domain protein (RefSeq) low > 64
Caulobacter crescentus NA1000 Δfur 0.51 CCNA_03847 endonuclease III 0.40 CCNA_03282 pirin low > 67
Caulobacter crescentus NA1000 0.51 CCNA_03847 endonuclease III 0.40 CCNA_03282 pirin low > 66
Mucilaginibacter yixingensis YX-36 DSM 26809 0.41 ABZR88_RS16725 endonuclease III 0.42 ABZR88_RS10650 pirin family protein low > 71
Echinicola vietnamensis KMM 6221, DSM 17526 0.39 Echvi_1263 endonuclease III 0.36 Echvi_2931 Pirin-related protein low > 79
Pedobacter sp. GW460-11-11-14-LB5 0.37 CA265_RS00605 endonuclease III 0.36 CA265_RS23215 hypothetical protein low > 88

Not shown: 46 genomes with orthologs for HSERO_RS08070 only; 5 genomes with orthologs for HSERO_RS12655 only