Conservation of cofitness between HSERO_RS01560 and HSERO_RS11085 in Herbaspirillum seropedicae SmR1

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS01560 transporter 1.0 HSERO_RS11085 L-aspartate oxidase 0.34 17
Dechlorosoma suillum PS 0.79 Dsui_2026 hydrophobe/amphiphile efflux-1 (HAE1) family transporter 0.66 Dsui_2452 L-aspartate oxidase — —
Paraburkholderia sabiae LMG 24235 0.77 QEN71_RS20105 efflux RND transporter permease subunit 0.73 QEN71_RS03070 L-aspartate oxidase low > 153
Burkholderia phytofirmans PsJN 0.77 BPHYT_RS22515 multidrug efflux RND transporter permease subunit 0.72 BPHYT_RS15640 L-aspartate oxidase 0.24 9
Paraburkholderia bryophila 376MFSha3.1 0.76 H281DRAFT_03190 multidrug efflux pump 0.73 H281DRAFT_04069 L-aspartate oxidase low > 103
Paraburkholderia graminis OAS925 0.76 ABIE53_004106 multidrug efflux pump 0.73 ABIE53_003292 L-aspartate oxidase low > 113
Azospirillum brasilense Sp245 0.73 AZOBR_RS28205 transporter 0.22 AZOBR_RS18685 L-aspartate oxidase low > 97
Ralstonia sp. UNC404CL21Col 0.73 ABZR87_RS19400 efflux RND transporter permease subunit 0.74 ABZR87_RS00345 L-aspartate oxidase low > 80
Ralstonia solanacearum PSI07 0.72 RPSI07_RS05175 multidrug efflux RND transporter permease subunit 0.74 RPSI07_RS12660 L-aspartate oxidase low > 81
Ralstonia solanacearum UW163 0.72 UW163_RS20755 multidrug efflux RND transporter permease subunit 0.74 UW163_RS08945 L-aspartate oxidase — —
Ralstonia solanacearum IBSBF1503 0.71 RALBFv3_RS18375 multidrug efflux RND transporter permease subunit 0.74 RALBFv3_RS04725 L-aspartate oxidase low > 76
Azospirillum sp. SherDot2 0.71 MPMX19_02968 multidrug efflux RND transporter permease subunit OqxB28 0.27 MPMX19_05671 L-aspartate oxidase low > 112
Ralstonia solanacearum GMI1000 0.71 RS_RS22490 multidrug efflux RND transporter permease subunit 0.74 RS_RS12285 L-aspartate oxidase low > 80
Cupriavidus basilensis FW507-4G11 0.69 RR42_RS27685 multidrug efflux RND transporter permease subunit 0.74 RR42_RS17010 L-aspartate oxidase low > 128
Acidovorax sp. GW101-3H11 0.69 Ac3H11_258 RND multidrug efflux transporter; Acriflavin resistance protein 0.63 Ac3H11_3824 L-aspartate oxidase (EC 1.4.3.16) low > 79
Variovorax sp. SCN45 0.68 GFF429 RND efflux system, inner membrane transporter 0.65 GFF2580 L-aspartate oxidase (EC 1.4.3.16) low > 127
Magnetospirillum magneticum AMB-1 0.67 AMB_RS09480 multidrug efflux RND transporter permease subunit 0.58 AMB_RS19650 L-aspartate oxidase — —
Variovorax sp. OAS795 0.67 ABID97_RS17350 efflux RND transporter permease subunit 0.66 ABID97_RS07440 L-aspartate oxidase low > 91
Rhizobium sp. OAE497 0.67 ABIE40_RS14875 multidrug efflux RND transporter permease subunit 0.24 ABIE40_RS23260 L-aspartate oxidase low > 107
Pseudomonas sp. RS175 0.66 PFR28_02013 multidrug efflux RND transporter permease subunit OqxB10 0.63 PFR28_00689 L-aspartate oxidase low > 88
Rhodospirillum rubrum S1H 0.66 Rru_A0886 Hydrophobe/amphiphile efflux-1 HAE1 (NCBI) 0.26 Rru_A1433 L-aspartate oxidase (NCBI) low > 58
Sinorhizobium meliloti 1021 0.66 SMc01095 multidrug-efflux system transmembrane protein 0.28 SMc02599 L-aspartate oxidase low > 103
Agrobacterium fabrum C58 0.63 Atu2483 AcrB/AcrD/AcrF family protein 0.25 Atu4097 L-aspartate oxidase low > 89
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_2968 Hydrophobe/amphiphile efflux-1 HAE1 0.64 Psyr_3959 L-aspartate oxidase low > 86
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_2968 Hydrophobe/amphiphile efflux-1 HAE1 0.64 Psyr_3959 L-aspartate oxidase low > 86
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_27605 transporter 0.63 AO356_04580 L-aspartate oxidase low > 104
Pseudomonas putida KT2440 0.61 PP_3426 Multidrug efflux RND transporter MexF 0.64 PP_1426 L-aspartate oxidase low > 96
Pseudomonas simiae WCS417 0.61 PS417_13190 transporter 0.63 PS417_07115 L-aspartate oxidase low > 88
Pseudomonas fluorescens SBW25-INTG 0.61 PFLU_RS14260 efflux RND transporter permease subunit 0.63 PFLU_RS07225 L-aspartate oxidase low > 109
Pseudomonas fluorescens SBW25 0.61 PFLU_RS14260 efflux RND transporter permease subunit 0.63 PFLU_RS07225 L-aspartate oxidase low > 109
Pseudomonas fluorescens FW300-N2E3 0.61 AO353_23960 transporter 0.63 AO353_17620 L-aspartate oxidase low > 101
Pseudomonas fluorescens GW456-L13 0.61 PfGW456L13_3060 Multidrug efflux transporter MexF 0.63 PfGW456L13_4517 L-aspartate oxidase (EC 1.4.3.16) low > 87
Pseudomonas fluorescens FW300-N1B4 0.61 Pf1N1B4_4864 Multidrug efflux transporter MexF 0.62 Pf1N1B4_3322 L-aspartate oxidase (EC 1.4.3.16) low > 87
Pseudomonas fluorescens FW300-N2E2 0.61 Pf6N2E2_824 Multidrug efflux transporter MexF 0.62 Pf6N2E2_2758 L-aspartate oxidase (EC 1.4.3.16) low > 103
Pseudomonas stutzeri RCH2 0.60 Psest_2144 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 0.64 Psest_3101 L-aspartate oxidase low > 67
Pseudomonas sp. S08-1 0.60 OH686_01005 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) 0.63 OH686_20040 L-aspartate oxidase low > 80
Shewanella sp. ANA-3 0.59 Shewana3_1078 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) 0.61 Shewana3_3033 L-aspartate oxidase (RefSeq) — —
Shewanella oneidensis MR-1 0.59 SO3492 mexF RND multidrug efflux transporter MexF (NCBI ptt file) 0.61 SO1341 nadB L-aspartate oxidase (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.58 MIT1002_02998 Efflux pump membrane transporter BepE 0.58 MIT1002_02720 L-aspartate oxidase — —
Pantoea sp. MT58 0.57 IAI47_10310 multidrug efflux RND transporter permease subunit OqxB 0.58 IAI47_04845 L-aspartate oxidase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.56 GFF4246 RND efflux system, inner membrane transporter CmeB 0.59 GFF2106 L-aspartate oxidase (EC 1.4.3.16) low > 78
Klebsiella michiganensis M5al 0.55 BWI76_RS12955 multidrug efflux RND transporter permease subunit OqxB 0.58 BWI76_RS21360 L-aspartate oxidase low > 92
Rahnella sp. WP5 0.55 EX31_RS01495 multidrug efflux RND transporter permease subunit 0.58 EX31_RS21795 L-aspartate oxidase low > 89
Enterobacter sp. TBS_079 0.55 MPMX20_01155 multidrug efflux RND transporter permease subunit OqxB3 0.57 MPMX20_03445 L-aspartate oxidase low > 85
Enterobacter asburiae PDN3 0.54 EX28DRAFT_1472 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 0.58 EX28DRAFT_0071 L-aspartate oxidase (EC 1.4.3.16) low > 76
Serratia liquefaciens MT49 0.54 IAI46_13385 efflux RND transporter permease subunit 0.59 IAI46_19590 L-aspartate oxidase low > 86
Sphingomonas koreensis DSMZ 15582 0.53 Ga0059261_0436 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 0.54 Ga0059261_2248 L-aspartate oxidase (EC 1.4.3.16) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.45 A4249_RS09925 multidrug efflux RND transporter permease subunit 0.23 A4249_RS00630 L-aspartate oxidase low > 48
Shewanella loihica PV-4 0.44 Shew_1164 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) 0.61 Shew_1047 L-aspartate oxidase (RefSeq) — —

Not shown: 6 genomes with orthologs for HSERO_RS01560 only; 42 genomes with orthologs for HSERO_RS11085 only