| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Herbaspirillum seropedicae SmR1 | 1.0 | HSERO_RS01325 | | cation/multidrug efflux protein | 1.0 | HSERO_RS06055 | | nitrate transporter | 0.40 | 6 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.73 | H281DRAFT_05197 | | Multidrug efflux pump subunit AcrB | 0.40 | H281DRAFT_01219 | | nitrate/nitrite transport system substrate-binding protein | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.72 | ABIE53_002354 | | multidrug efflux pump | 0.40 | ABIE53_005718 | | ABC-type nitrate/sulfonate/bicarbonate transport system substrate-binding protein | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.71 | QEN71_RS07190 | | efflux RND transporter permease subunit | 0.39 | QEN71_RS12555 | | CmpA/NrtA family ABC transporter substrate-binding protein | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.71 | BPHYT_RS11375 | | acriflavin resistance protein | 0.40 | BPHYT_RS28170 | | nitrate ABC transporter substrate-binding protein | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.50 | PFLU_RS06185 | | efflux RND transporter permease subunit | 0.53 | PFLU_RS22570 | | ABC transporter substrate-binding protein | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.50 | PFLU_RS06185 | | efflux RND transporter permease subunit | 0.53 | PFLU_RS22570 | | ABC transporter substrate-binding protein | low | > 109 |
| Pseudomonas stutzeri RCH2 | 0.50 | Psest_1566 | | Cation/multidrug efflux pump | 0.54 | Psest_1937 | | ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components | low | > 67 |
| Pseudomonas simiae WCS417 | 0.50 | PS417_06115 | | multidrug transporter AcrB | 0.54 | PS417_20960 | | Nitrate-binding regulatory protein (nasS) (from data) | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.50 | PfGW456L13_4730 | | RND efflux transporter | 0.54 | PfGW456L13_4097 | | Nitrate ABC transporter, nitrate-binding protein | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.50 | AO353_16365 | | multidrug transporter AcrB | 0.52 | AO353_00785 | | nitrate transporter | low | > 101 |
| Pseudomonas sp. S08-1 | 0.49 | OH686_06740 | | Multidrug efflux system, inner membrane proton/drug antiporter (RND type) | 0.62 | OH686_04015 | | Nitrate ABC transporter, substrate-binding protein | low | > 80 |
| Pseudomonas fluorescens FW300-N1B4 | 0.49 | Pf1N1B4_3063 | | RND efflux transporter | 0.63 | Pf1N1B4_5096 | | Nitrate ABC transporter, nitrate-binding protein | low | > 87 |
| Dechlorosoma suillum PS | 0.49 | Dsui_0408 | | cation/multidrug efflux pump | 0.70 | Dsui_1831 | | ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component | low | > 51 |
| Pseudomonas fluorescens FW300-N2E2 | 0.49 | Pf6N2E2_3091 | | RND efflux transporter | 0.54 | Pf6N2E2_2374 | | Nitrate ABC transporter, nitrate-binding protein | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.49 | AO356_06130 | | multidrug transporter AcrB | 0.53 | AO356_02750 | | nitrate transporter | low | > 104 |
| Pseudomonas putida KT2440 | 0.49 | PP_1517 | | RND efflux transporter | 0.52 | PP_2094 | | putative Nitrate-binding protein NasS | low | > 96 |
| Pseudomonas sp. RS175 | 0.49 | PFR28_00379 | | Cobalt-zinc-cadmium resistance protein CzcA | 0.53 | PFR28_01053 | | Nitrate/nitrite binding protein NrtA | low | > 88 |
| Azospirillum sp. SherDot2 | 0.48 | MPMX19_05260 | | Cobalt-zinc-cadmium resistance protein CzcA | 0.25 | MPMX19_05925 | | Nitrate/nitrite binding protein NrtA | low | > 112 |
| Ralstonia solanacearum IBSBF1503 | 0.46 | RALBFv3_RS01385 | | AcrB/AcrD/AcrF family protein | 0.75 | RALBFv3_RS11035 | | nitrate ABC transporter substrate-binding protein | low | > 76 |
| Ralstonia solanacearum UW163 | 0.46 | UW163_RS14695 | | AcrB/AcrD/AcrF family protein | 0.75 | UW163_RS02545 | | nitrate ABC transporter substrate-binding protein | — | — |
| Ralstonia sp. UNC404CL21Col | 0.46 | ABZR87_RS13180 | | efflux RND transporter permease subunit | 0.75 | ABZR87_RS06900 | | CmpA/NrtA family ABC transporter substrate-binding protein | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.46 | RPSI07_RS16100 | | AcrB/AcrD/AcrF family protein | 0.75 | RPSI07_RS22270 | | nitrate ABC transporter substrate-binding protein | low | > 81 |
| Cupriavidus basilensis FW507-4G11 | 0.46 | RR42_RS07915 | | multidrug transporter AcrB | 0.74 | RR42_RS01955 | | nitrate transporter | low | > 128 |
| Ralstonia solanacearum GMI1000 | 0.46 | RS_RS08335 | | AcrB/AcrD/AcrF family protein | 0.74 | RS_RS01875 | | nitrate ABC transporter substrate-binding protein | low | > 80 |
| Rhodopseudomonas palustris CGA009 | 0.44 | TX73_022880 | | efflux RND transporter permease subunit | 0.28 | TX73_010885 | | CmpA/NrtA family ABC transporter substrate-binding protein | low | > 86 |
| Acidovorax sp. GW101-3H11 | 0.43 | Ac3H11_933 | | Probable transmembrane drug efflux protein | 0.76 | Ac3H11_3220 | | Nitrate ABC transporter, nitrate-binding protein | low | > 79 |
| Variovorax sp. SCN45 | 0.43 | GFF493 | | RND efflux system, inner membrane transporter | 0.76 | GFF4737 | | Nitrate ABC transporter, substrate-binding protein | 0.51 | 16 |
| Variovorax sp. OAS795 | 0.43 | ABID97_RS17615 | | efflux RND transporter permease subunit | 0.76 | ABID97_RS20560 | | CmpA/NrtA family ABC transporter substrate-binding protein | low | > 91 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.43 | GFF4033 | | Probable transmembrane drug efflux protein | 0.77 | GFF3671 | | Nitrate ABC transporter, nitrate-binding protein | low | > 90 |
| Pseudomonas syringae pv. syringae B728a | 0.42 | Psyr_0346 | | Acriflavin resistance protein | 0.53 | Psyr_2105 | | conserved hypothetical protein | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.42 | Psyr_0346 | | Acriflavin resistance protein | 0.53 | Psyr_2105 | | conserved hypothetical protein | low | > 86 |
| Rhizobium sp. OAE497 | 0.42 | ABIE40_RS17045 | | efflux RND transporter permease subunit | 0.31 | ABIE40_RS25545 | | CmpA/NrtA family ABC transporter substrate-binding protein | low | > 107 |
| Sinorhizobium meliloti 1021 | 0.42 | SM_b20345 | | efflux protein | 0.32 | SMa0585 | | nitrate ABC transporter substrate-binding protein | low | > 103 |
| Agrobacterium fabrum C58 | 0.40 | Atu5381 | | AcrB/AcrD/AcrF family protein | 0.32 | Atu3905 | | nitrate ABC transporter substrate-binding protein | — | — |
| Pectobacterium carotovorum WPP14 | 0.38 | HER17_RS07500 | | efflux RND transporter permease subunit | 0.61 | HER17_RS07315 | | ABC transporter substrate-binding protein | low | > 75 |
| Bosea sp. OAE506 | 0.38 | ABIE41_RS18635 | | efflux RND transporter permease subunit | 0.30 | ABIE41_RS21330 | | CmpA/NrtA family ABC transporter substrate-binding protein | low | > 77 |
| Dickeya dianthicola ME23 | 0.38 | DZA65_RS08250 | | efflux RND transporter permease subunit | 0.61 | DZA65_RS14765 | | ABC transporter substrate-binding protein | low | > 75 |
| Rahnella sp. WP5 | 0.38 | EX31_RS17700 | | efflux RND transporter permease subunit | 0.59 | EX31_RS09125 | | ABC transporter substrate-binding protein | low | > 89 |
| Dickeya dadantii 3937 | 0.37 | DDA3937_RS04730 | | efflux RND transporter permease subunit | 0.61 | DDA3937_RS14105 | | ABC transporter substrate-binding protein | low | > 74 |
| Dickeya dianthicola 67-19 | 0.35 | HGI48_RS07915 | | efflux RND transporter permease subunit | 0.61 | HGI48_RS14105 | | ABC transporter substrate-binding protein | low | > 71 |
| Klebsiella michiganensis M5al | 0.35 | BWI76_RS05720 | | cation/multidrug efflux pump | 0.59 | BWI76_RS17380 | | nitrate transporter component | low | > 92 |
| Enterobacter sp. TBS_079 | 0.35 | MPMX20_02160 | | Nickel and cobalt resistance protein CnrA | 0.55 | MPMX20_02624 | | Nitrate/nitrite binding protein NrtA | low | > 85 |
| Pantoea sp. MT58 | 0.35 | IAI47_21725 | | efflux RND transporter permease subunit | 0.61 | IAI47_11185 | | ABC transporter substrate-binding protein | low | > 76 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.35 | Xcc-8004.557.1 | | cation efflux system protein | 0.36 | Xcc-8004.2714.1 | | Nitrate ABC transporter, nitrate-binding protein | low | > 74 |
| Enterobacter asburiae PDN3 | 0.35 | EX28DRAFT_1393 | | Cation/multidrug efflux pump | 0.55 | EX28DRAFT_0842 | | ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components | low | > 76 |
| Azospirillum brasilense Sp245 | 0.34 | AZOBR_RS32765 | | multidrug transporter | 0.24 | AZOBR_RS18560 | | ABC transporter for nitrate, periplasmic substrate-binding component (from data) | low | > 97 |
| Caulobacter crescentus NA1000 Δfur | 0.34 | CCNA_01866 | | cation/multidrug efflux pump acrB4 | 0.30 | CCNA_00645 | | nitrate binding protein nrtA | low | > 67 |
| Caulobacter crescentus NA1000 | 0.34 | CCNA_01866 | | cation/multidrug efflux pump acrB4 | 0.30 | CCNA_00645 | | nitrate binding protein nrtA | low | > 66 |
| Marinobacter adhaerens HP15 | 0.33 | HP15_1118 | | transporter, AcrB/D/F family | 0.26 | HP15_1012 | | nitrate transporter component, NrtA | 0.72 | 38 |
| Alteromonas macleodii MIT1002 | 0.25 | MIT1002_01561 | | Swarming motility protein SwrC | 0.26 | MIT1002_00709 | | Nitrate transport protein NrtA precursor | low | > 70 |
| Dinoroseobacter shibae DFL-12 | 0.24 | Dshi_1262 | | acriflavin resistance protein (RefSeq) | 0.25 | Dshi_1663 | | nitrate transporter substrate-binding (RefSeq) | low | > 64 |
Not shown: 17 genomes with orthologs for HSERO_RS01325 only; 3 genomes with orthologs for HSERO_RS06055 only