| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Herbaspirillum seropedicae SmR1 | 1.0 | HSERO_RS21710 | | antibiotic resistance protein MarC | 1.0 | HSERO_RS02415 | | hemolysin D | 0.40 | 13 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.39 | GFF2690 | | Multiple antibiotic resistance protein marC | 0.53 | GFF3839 | | RND efflux system, membrane fusion protein CmeA | low | > 90 |
| Paraburkholderia sabiae LMG 24235 | 0.31 | QEN71_RS08795 | | MarC family protein | 0.47 | QEN71_RS29870 | | efflux RND transporter periplasmic adaptor subunit | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.29 | H281DRAFT_02837 | | multiple antibiotic resistance protein | 0.42 | H281DRAFT_04171 | | membrane fusion protein, multidrug efflux system | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.29 | ABIE53_005956 | | multiple antibiotic resistance protein | 0.42 | ABIE53_003409 | | membrane fusion protein (multidrug efflux system) | low | > 113 |
| Burkholderia phytofirmans PsJN | 0.29 | BPHYT_RS26390 | | antibiotic resistance protein | 0.43 | BPHYT_RS16175 | | hemolysin D | low | > 109 |
| Azospirillum brasilense Sp245 | 0.26 | AZOBR_RS31980 | | membrane protein | 0.42 | AZOBR_RS30180 | | hemolysin D | low | > 97 |
| Azospirillum sp. SherDot2 | 0.25 | MPMX19_05781 | | hypothetical protein | 0.45 | MPMX19_05883 | | Multidrug resistance protein MexA | low | > 112 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.22 | BT4504 | | conserved hypothetical protein (NCBI ptt file) | 0.26 | BT0304 | | acriflavine resistance protein A precursor (NCBI ptt file) | low | > 81 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.22 | CA264_01140 | | antibiotic resistance protein MarC | 0.23 | CA264_03650 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | low | > 74 |
| Bacteroides ovatus ATCC 8483 | 0.21 | BACOVA_05310 | | MarC family integral membrane protein | 0.26 | BACOVA_00421 | | ATP synthase, Delta/Epsilon chain, long alpha-helix domain protein | low | > 94 |
| Enterobacter asburiae PDN3 | 0.21 | EX28DRAFT_1204 | | membrane protein, MarC family | 0.45 | EX28DRAFT_3318 | | RND family efflux transporter, MFP subunit | low | > 76 |
| Rhodospirillum rubrum S1H | 0.21 | Rru_A0654 | | Multiple antibiotic resistance (MarC)-related proteins (NCBI) | 0.44 | Rru_A2050 | | Secretion protein HlyD (NCBI) | low | > 58 |
| Enterobacter sp. TBS_079 | 0.20 | MPMX20_02261 | | hypothetical protein | 0.43 | MPMX20_04174 | | Multidrug export protein AcrE | low | > 85 |
| Bacteroides stercoris CC31F | 0.20 | HMPREF1181_RS09550 | | NAAT family transporter | 0.26 | HMPREF1181_RS04580 | | efflux RND transporter periplasmic adaptor subunit | low | > 56 |
| Parabacteroides merdae CL09T00C40 | 0.19 | HMPREF1078_RS10700 | | MarC family protein | 0.28 | HMPREF1078_RS00005 | | efflux RND transporter periplasmic adaptor subunit | low | > 61 |
| Phocaeicola dorei CL03T12C01 | 0.19 | ABI39_RS01190 | | NAAT family transporter | 0.25 | ABI39_RS18720 | | efflux RND transporter periplasmic adaptor subunit | low | > 72 |
| Phocaeicola vulgatus CL09T03C04 | 0.19 | HMPREF1058_RS00315 | | NAAT family transporter | 0.25 | HMPREF1058_RS05165 | | efflux RND transporter periplasmic adaptor subunit | low | > 67 |
| Sinorhizobium meliloti 1021 | 0.18 | SMc01232 | | hypothetical protein | 0.42 | SMc02868 | | multidrug efflux system protein | low | > 103 |
| Lysobacter sp. OAE881 | 0.17 | ABIE51_RS10495 | | MarC family NAAT transporter | 0.33 | ABIE51_RS17985 | | efflux RND transporter periplasmic adaptor subunit | low | > 62 |
| Acidovorax sp. GW101-3H11 | 0.17 | Ac3H11_2153 | | Multiple antibiotic resistance (MarC) -related proteins | 0.47 | Ac3H11_4449 | | RND efflux system, membrane fusion protein CmeA | low | > 79 |
| Castellaniella sp019104865 MT123 | 0.17 | ABCV34_RS00685 | | MarC family protein | 0.38 | ABCV34_RS04230 | | efflux RND transporter periplasmic adaptor subunit | low | > 48 |
| Ralstonia solanacearum GMI1000 | 0.17 | RS_RS14775 | | membrane protein | 0.55 | RS_RS00050 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | — | — |
| Ralstonia solanacearum UW163 | 0.17 | UW163_RS06785 | | membrane protein | 0.55 | UW163_RS04130 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.17 | RALBFv3_RS06830 | | membrane protein | 0.55 | RALBFv3_RS09450 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | — | — |
| Ralstonia sp. UNC404CL21Col | 0.16 | ABZR87_RS02485 | | MarC family protein | 0.50 | ABZR87_RS05310 | | efflux RND transporter periplasmic adaptor subunit | low | > 80 |
| Vibrio cholerae E7946 ATCC 55056 | 0.16 | CSW01_10170 | | MarC family protein | 0.12 | CSW01_08415 | | efflux RND transporter periplasmic adaptor subunit | low | > 62 |
| Variovorax sp. OAS795 | 0.16 | ABID97_RS00755 | | MarC family protein | 0.52 | ABID97_RS00320 | | efflux RND transporter periplasmic adaptor subunit | low | > 91 |
| Variovorax sp. SCN45 | 0.16 | GFF3614 | | UPF0056 inner membrane protein YchE | 0.49 | GFF3726 | | RND efflux system, membrane fusion protein | low | > 127 |
| Agrobacterium fabrum C58 | 0.16 | Atu1508 | | hypothetical protein | 0.40 | Atu3203 | | RND multidrug efflux membrane permease | low | > 89 |
| Alteromonas macleodii MIT1002 | 0.15 | MIT1002_03685 | | putative antibiotic transporter | 0.36 | MIT1002_00134 | | Acriflavine resistance protein A precursor | low | > 70 |
| Cupriavidus basilensis FW507-4G11 | 0.15 | RR42_RS18900 | | membrane protein | 0.48 | RR42_RS32415 | | hemolysin D | low | > 128 |
| Ralstonia solanacearum PSI07 | 0.15 | RPSI07_RS10405 | | membrane protein | 0.56 | RPSI07_RS23900 | | efflux RND transporter periplasmic adaptor subunit | — | — |
| Dinoroseobacter shibae DFL-12 | 0.15 | Dshi_1348 | | multiple antibiotic resistance (MarC)-related protein (RefSeq) | 0.13 | Dshi_0916 | | efflux transporter, RND family, MFP subunit (RefSeq) | low | > 64 |
| Pseudomonas sp. RS175 | 0.15 | PFR28_05211 | | hypothetical protein | 0.44 | PFR28_02462 | | Multidrug resistance protein MexA | low | > 88 |
| Synechococcus elongatus PCC 7942 | 0.14 | Synpcc7942_1365 | | Multiple antibiotic resistance (MarC)-related proteins | 0.12 | Synpcc7942_2368 | | Secretion protein HlyD | low | > 38 |
| Desulfovibrio vulgaris Miyazaki F | 0.14 | DvMF_0399 | | multiple antibiotic resistance (MarC)-related protein (RefSeq) | 0.28 | DvMF_2164 | | efflux transporter, RND family, MFP subunit (RefSeq) | low | > 51 |
| Pseudomonas fluorescens FW300-N1B4 | 0.14 | Pf1N1B4_1320 | | membrane protein, MarC family | 0.46 | Pf1N1B4_4773 | | RND efflux system, membrane fusion protein CmeA | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.14 | PfGW456L13_60 | | membrane protein, MarC family | 0.47 | PfGW456L13_2955 | | RND efflux system, membrane fusion protein CmeA | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.14 | AO353_13635 | | hypothetical protein | 0.46 | AO353_26840 | | RND transporter | low | > 101 |
| Pseudomonas fluorescens FW300-N2C3 | 0.14 | AO356_08255 | | hypothetical protein | 0.46 | AO356_28725 | | RND transporter | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.14 | Pf6N2E2_3525 | | membrane protein, MarC family | 0.46 | Pf6N2E2_1660 | | RND efflux system, membrane fusion protein CmeA | low | > 103 |
| Pseudomonas simiae WCS417 | 0.13 | PS417_02925 | | membrane protein | 0.48 | PS417_12590 | | RND transporter | — | — |
| Pseudomonas putida KT2440 | 0.13 | PP_4825 | | Membrane protein, MarC family | 0.45 | PP_3455 | | Multidrug efflux RND membrane fusion protein | low | > 96 |
| Pseudomonas fluorescens SBW25 | 0.13 | PFLU_RS03000 | | MarC family protein | 0.49 | PFLU_RS13285 | | efflux RND transporter periplasmic adaptor subunit | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.13 | PFLU_RS03000 | | MarC family protein | 0.49 | PFLU_RS13285 | | efflux RND transporter periplasmic adaptor subunit | low | > 109 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.12 | Echvi_1812 | | membrane protein, MarC family | 0.21 | Echvi_3741 | | RND family efflux transporter, MFP subunit | low | > 79 |
| Marinobacter adhaerens HP15 | 0.12 | HP15_3589 | | multiple antibiotic resistance (MarC)-related protein | 0.20 | HP15_932 | | efflux transporter, RND family, MFP subunit | low | > 73 |
Not shown: 42 genomes with orthologs for HSERO_RS21710 only; 9 genomes with orthologs for HSERO_RS02415 only