Conservation of cofitness between HSERO_RS19630 and HSERO_RS02260 in Herbaspirillum seropedicae SmR1

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS19630 AMP nucleosidase 1.0 HSERO_RS02260 DNA polymerase I 0.38 16
Paraburkholderia sabiae LMG 24235 0.69 QEN71_RS17860 AMP nucleosidase 0.69 QEN71_RS17885 DNA polymerase I — —
Burkholderia phytofirmans PsJN 0.68 BPHYT_RS33635 AMP nucleosidase 0.68 BPHYT_RS33610 DNA polymerase I low > 109
Paraburkholderia bryophila 376MFSha3.1 0.68 H281DRAFT_06027 AMP nucleosidase 0.68 H281DRAFT_06022 DNA polymerase I 0.41 88
Paraburkholderia graminis OAS925 0.68 ABIE53_004847 AMP nucleosidase 0.68 ABIE53_004852 DNA polymerase-1 low > 113
Azospirillum brasilense Sp245 0.66 AZOBR_RS14175 AMP nucleosidase 0.36 AZOBR_RS30685 DNA polymerase low > 97
Azospirillum sp. SherDot2 0.65 MPMX19_00597 AMP nucleosidase 0.36 MPMX19_04869 DNA polymerase I low > 112
Acidovorax sp. GW101-3H11 0.61 Ac3H11_4669 AMP nucleosidase (EC 3.2.2.4) 0.60 Ac3H11_1648 DNA polymerase I (EC 2.7.7.7) — —
Variovorax sp. SCN45 0.59 GFF3583 AMP nucleosidase (EC 3.2.2.4) 0.62 GFF4006 DNA polymerase I (EC 2.7.7.7) low > 127
Variovorax sp. OAS795 0.59 ABID97_RS00880 AMP nucleosidase 0.62 ABID97_RS09180 DNA polymerase I low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.59 GFF370 AMP nucleosidase (EC 3.2.2.4) 0.59 GFF5584 DNA polymerase I (EC 2.7.7.7) low > 90
Castellaniella sp019104865 MT123 0.58 ABCV34_RS12200 AMP nucleosidase 0.58 ABCV34_RS02195 DNA polymerase I low > 48
Agrobacterium fabrum C58 0.57 Atu1006 AMP nucleosidase 0.37 Atu0110 DNA polymerase I — —
Rhizobium sp. OAE497 0.56 ABIE40_RS05905 AMP nucleosidase 0.37 ABIE40_RS00490 DNA polymerase I low > 107
Sinorhizobium meliloti 1021 0.56 SMc02386 AMP nucleosidase 0.36 SMc02850 DNA polymerase I — —
Phaeobacter inhibens DSM 17395 0.53 PGA1_c34250 AMP nucleosidase Amn 0.38 PGA1_c31780 DNA polymerase I low > 62
Dinoroseobacter shibae DFL-12 0.53 Dshi_3289 AMP nucleosidase (RefSeq) 0.37 Dshi_2909 DNA polymerase I (RefSeq) — —
Ralstonia solanacearum UW163 0.52 UW163_RS23015 AMP nucleosidase 0.70 UW163_RS09920 DNA polymerase I — —
Cupriavidus basilensis FW507-4G11 0.52 RR42_RS21185 AMP nucleosidase 0.71 RR42_RS15050 DNA polymerase I 0.59 2
Ralstonia solanacearum IBSBF1503 0.52 RALBFv3_RS22470 AMP nucleosidase 0.70 RALBFv3_RS03750 DNA polymerase I low > 76
Ralstonia solanacearum PSI07 0.52 RPSI07_RS00695 AMP nucleosidase 0.71 RPSI07_RS13480 DNA polymerase I low > 81
Ralstonia solanacearum GMI1000 0.52 RS_RS18175 AMP nucleosidase 0.71 RS_RS11195 DNA polymerase I low > 80
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS17145 AMP nucleosidase 0.70 ABZR87_RS15680 DNA polymerase I 0.47 29
Bosea sp. OAE506 0.42 ABIE41_RS04230 AMP nucleosidase 0.34 ABIE41_RS03570 DNA polymerase I low > 77
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF3974 AMP nucleosidase (EC 3.2.2.4) 0.51 GFF2216 DNA polymerase I (EC 2.7.7.7) low > 78
Enterobacter sp. TBS_079 0.41 MPMX20_02987 AMP nucleosidase 0.51 MPMX20_04601 DNA polymerase I low > 85
Caulobacter crescentus NA1000 Δfur 0.41 CCNA_00265 AMP nucleosidase 0.37 CCNA_03577 DNA polymerase I — —
Caulobacter crescentus NA1000 0.41 CCNA_00265 AMP nucleosidase 0.37 CCNA_03577 DNA polymerase I — —
Brevundimonas sp. GW460-12-10-14-LB2 0.41 A4249_RS14550 AMP nucleosidase 0.38 A4249_RS13840 DNA polymerase I — —
Pseudomonas stutzeri RCH2 0.41 Psest_0542 AMP nucleosidase 0.52 Psest_4219 DNA polymerase I 0.34 19
Enterobacter asburiae PDN3 0.41 EX28DRAFT_0555 AMP nucleosidase 0.51 EX28DRAFT_4343 DNA polymerase I (EC 2.7.7.7) — —
Klebsiella michiganensis M5al 0.41 BWI76_RS18545 AMP nucleosidase 0.51 BWI76_RS00355 DNA polymerase I low > 92
Sphingomonas koreensis DSMZ 15582 0.41 Ga0059261_4012 AMP nucleosidase 0.35 Ga0059261_2244 DNA polymerase I (EC 2.7.7.7) low > 68
Pseudomonas simiae WCS417 0.41 PS417_24585 AMP nucleosidase 0.51 PS417_00405 DNA polymerase I low > 88
Erwinia tracheiphila SCR3 0.41 LU632_RS14885 AMP nucleosidase 0.51 LU632_RS23870 polA DNA polymerase I — —
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS26515 AMP nucleosidase 0.50 PFLU_RS00395 DNA polymerase I low > 109
Pseudomonas fluorescens SBW25 0.41 PFLU_RS26515 AMP nucleosidase 0.50 PFLU_RS00395 DNA polymerase I low > 109
Escherichia coli ECRC100 0.41 OKFHMN_25180 amn AMP nucleosidase 0.52 OKFHMN_14150 polA DNA polymerase I — —
Escherichia coli BW25113 0.41 b1982 amn AMP nucleosidase (NCBI) 0.52 b3863 polA DNA polymerase I (NCBI) low > 76
Escherichia coli BL21 0.41 ECD_01894 AMP nucleosidase 0.52 ECD_03749 5 — —
Escherichia fergusonii Becca 0.41 EFB2_01930 AMP nucleosidase 0.52 EFB2_04753 DNA polymerase I — —
Escherichia coli ECRC62 0.41 BNILDI_14920 amn AMP nucleosidase 0.51 BNILDI_05250 polA DNA polymerase I — —
Escherichia coli ECRC98 0.41 JDDGAC_29310 amn AMP nucleosidase 0.52 JDDGAC_17775 polA DNA polymerase I — —
Escherichia coli ECOR38 0.41 HEPCGN_03515 amn AMP nucleosidase 0.52 HEPCGN_12785 polA DNA polymerase I — —
Escherichia coli ECRC101 0.41 MCAODC_20210 amn AMP nucleosidase 0.52 MCAODC_04650 polA DNA polymerase I — —
Escherichia coli ECOR27 0.41 NOLOHH_16125 amn AMP nucleosidase 0.52 NOLOHH_06280 polA DNA polymerase I — —
Escherichia coli ECRC99 0.41 KEDOAH_02930 amn AMP nucleosidase 0.52 KEDOAH_14000 polA DNA polymerase I — —
Escherichia coli Nissle 1917 0.41 ECOLIN_RS11455 AMP nucleosidase 0.52 ECOLIN_RS22270 DNA polymerase I — —
Escherichia coli ECRC102 0.41 NIAGMN_22685 amn AMP nucleosidase 0.52 NIAGMN_11905 polA DNA polymerase I — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_01726 AMP nucleosidase 0.51 OHPLBJKB_04189 DNA polymerase I — —
Pseudomonas syringae pv. syringae B728a 0.40 Psyr_4337 AMP nucleosidase 0.50 Psyr_0270 DNA polymerase I low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.40 Psyr_4337 AMP nucleosidase 0.50 Psyr_0270 DNA polymerase I low > 86
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_2721 AMP nucleosidase (EC 3.2.2.4) 0.49 Pf1N1B4_1875 DNA polymerase I (EC 2.7.7.7) — —
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_06335 AMP nucleosidase 0.51 AO353_10930 DNA polymerase I low > 101
Pseudomonas sp. RS175 0.40 PFR28_03840 AMP nucleosidase 0.50 PFR28_04624 DNA polymerase I low > 88
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_15450 AMP nucleosidase 0.50 AO356_11465 DNA polymerase I low > 104
Dickeya dadantii 3937 0.40 DDA3937_RS06940 AMP nucleosidase 0.51 DDA3937_RS00105 DNA polymerase I — —
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_5027 AMP nucleosidase (EC 3.2.2.4) 0.50 Pf6N2E2_4162 DNA polymerase I (EC 2.7.7.7) low > 103
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_1388 AMP nucleosidase (EC 3.2.2.4) 0.49 PfGW456L13_594 DNA polymerase I (EC 2.7.7.7) 0.41 1
Pseudomonas putida KT2440 0.40 PP_4779 AMP nucleosidase 0.52 PP_0123 DNA polymerase I, 5 low > 96
Pantoea sp. MT58 0.40 IAI47_07865 AMP nucleosidase 0.52 IAI47_00430 DNA polymerase I low > 76
Serratia liquefaciens MT49 0.40 IAI46_16720 AMP nucleosidase 0.53 IAI46_24985 DNA polymerase I low > 86
Dickeya dianthicola ME23 0.39 DZA65_RS07265 AMP nucleosidase 0.50 DZA65_RS22235 DNA polymerase I — —
Dickeya dianthicola 67-19 0.39 HGI48_RS06920 AMP nucleosidase 0.51 HGI48_RS21260 DNA polymerase I — —
Pectobacterium carotovorum WPP14 0.39 HER17_RS14005 AMP nucleosidase 0.51 HER17_RS21470 DNA polymerase I — —
Rahnella sp. WP5 0.39 EX31_RS17755 AMP nucleosidase 0.52 EX31_RS15905 DNA polymerase I low > 89
Pseudomonas sp. S08-1 0.39 OH686_08855 AMP nucleosidase 0.52 OH686_12215 DNA polymerase I low > 80

Not shown: 0 genomes with orthologs for HSERO_RS19630 only; 33 genomes with orthologs for HSERO_RS02260 only