Conservation of cofitness between HGI48_RS14500 and HGI48_RS06770 in Dickeya dianthicola 67-19

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola 67-19 1.0 HGI48_RS14500 coniferyl aldehyde dehydrogenase 1.0 HGI48_RS06770 dTDP-4-dehydrorhamnose reductase 0.52 10
Dickeya dadantii 3937 0.91 DDA3937_RS14550 coniferyl aldehyde dehydrogenase 0.78 DDA3937_RS06750 dTDP-4-dehydrorhamnose reductase low > 74
Dickeya dianthicola ME23 0.90 DZA65_RS15435 coniferyl aldehyde dehydrogenase 0.69 DZA65_RS07125 dTDP-4-dehydrorhamnose reductase low > 75
Pseudomonas sp. RS175 0.56 PFR28_01983 Coniferyl aldehyde dehydrogenase 0.38 PFR28_04891 dTDP-4-dehydrorhamnose reductase — —
Caulobacter crescentus NA1000 Δfur 0.48 CCNA_01925 coniferyl aldehyde dehydrogenase 0.33 CCNA_01198 dTDP-4-dehydrorhamnose reductase low > 67
Caulobacter crescentus NA1000 0.48 CCNA_01925 coniferyl aldehyde dehydrogenase 0.33 CCNA_01198 dTDP-4-dehydrorhamnose reductase low > 66
Acidovorax sp. GW101-3H11 0.42 Ac3H11_1472 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.36 Ac3H11_1881 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) — —
Pseudomonas fluorescens SBW25 0.42 PFLU_RS28490 coniferyl aldehyde dehydrogenase 0.37 PFLU_RS01410 dTDP-4-dehydrorhamnose reductase — —
Pseudomonas fluorescens SBW25-INTG 0.42 PFLU_RS28490 coniferyl aldehyde dehydrogenase 0.37 PFLU_RS01410 dTDP-4-dehydrorhamnose reductase — —
Pseudomonas simiae WCS417 0.42 PS417_26845 coniferyl aldehyde dehydrogenase 0.36 PS417_01315 dTDP-4-dehydrorhamnose reductase — —
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_2315 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.36 Pf1N1B4_342 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) — —
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS04755 coniferyl aldehyde dehydrogenase 0.33 ABZR87_RS08650 dTDP-4-dehydrorhamnose reductase low > 80
Pseudomonas sp. S08-1 0.41 OH686_14170 Aldehyde dehydrogenase / Probable coniferyl aldehyde dehydrogenase 0.37 OH686_14365 dTDP-4-dehydrorhamnose reductase — —
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_985 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.37 PfGW456L13_2198 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) — —
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_4575 Coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.36 Pf6N2E2_3881 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) — —
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_13300 coniferyl aldehyde dehydrogenase 0.36 AO356_10055 dTDP-4-dehydrorhamnose reductase — —
Shewanella oneidensis MR-1 0.41 SO3683 coniferyl aldehyde dehydrogenase (NCBI ptt file) 0.28 SO1653 rfbD dTDP-4-dehydrorhamnose reductase (NCBI ptt file) — —
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_08290 coniferyl aldehyde dehydrogenase 0.37 AO353_11870 dTDP-4-dehydrorhamnose reductase — —
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS23860 coniferyl aldehyde dehydrogenase 0.38 HSERO_RS21855 dTDP-4-dehydrorhamnose reductase — —
Pseudomonas stutzeri RCH2 0.40 Psest_0247 NAD-dependent aldehyde dehydrogenases 0.42 Psest_1006 dTDP-4-dehydrorhamnose reductase low > 67
Shewanella sp. ANA-3 0.39 Shewana3_3251 aldehyde dehydrogenase (RefSeq) 0.48 Shewana3_1381 dTDP-4-dehydrorhamnose reductase (RefSeq) — —
Variovorax sp. SCN45 0.39 GFF5850 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.37 GFF6881 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) — —
Cupriavidus basilensis FW507-4G11 0.39 RR42_RS01275 aldehyde dehydrogenase 0.34 RR42_RS15835 dTDP-4-dehydrorhamnose reductase — —
Shewanella loihica PV-4 0.39 Shew_3103 aldehyde dehydrogenase (RefSeq) 0.52 Shew_1403 dTDP-4-dehydrorhamnose reductase (RefSeq) low > 60
Pseudomonas putida KT2440 0.38 PP_5120 coniferyl aldehyde dehydrogenase 0.35 PP_1784 dTDP-4-dehydrorhamnose reductase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_2579 Aldehyde dehydrogenase 0.37 Psyr_0925 dTDP-4-dehydrorhamnose reductase — —
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_2579 Aldehyde dehydrogenase 0.37 Psyr_0925 dTDP-4-dehydrorhamnose reductase — —
Shewanella amazonensis SB2B 0.38 Sama_2855 coniferyl aldehyde dehydrogenase (RefSeq) 0.35 Sama_2239 dTDP-4-dehydrorhamnose reductase (RefSeq) — —
Acinetobacter radioresistens SK82 0.37 MPMX26_00376 Coniferyl aldehyde dehydrogenase 0.33 MPMX26_00451 dTDP-4-dehydrorhamnose reductase low > 36
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF3943 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.32 GFF1838 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) — —
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS12980 coniferyl aldehyde dehydrogenase 0.34 ABZR86_RS18720 dTDP-4-dehydrorhamnose reductase low > 74
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_05792 coniferyl-aldehyde dehydrogenase 0.39 H281DRAFT_04825 dTDP-4-dehydrorhamnose reductase — —
Paraburkholderia graminis OAS925 0.36 ABIE53_000069 acyl-CoA reductase-like NAD-dependent aldehyde dehydrogenase 0.38 ABIE53_001140 dTDP-4-dehydrorhamnose reductase low > 113
Rhodopseudomonas palustris CGA009 0.36 TX73_008670 coniferyl aldehyde dehydrogenase 0.36 TX73_000615 dTDP-4-dehydrorhamnose reductase low > 86
Burkholderia phytofirmans PsJN 0.36 BPHYT_RS18745 coniferyl aldehyde dehydrogenase 0.38 BPHYT_RS04280 dTDP-4-dehydrorhamnose reductase — —
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS28765 coniferyl aldehyde dehydrogenase 0.37 QEN71_RS25740 dTDP-4-dehydrorhamnose reductase — —
Rhodanobacter denitrificans FW104-10B01 0.34 LRK54_RS07140 coniferyl aldehyde dehydrogenase 0.38 LRK54_RS05680 dTDP-4-dehydrorhamnose reductase — —
Rhodanobacter denitrificans MT42 0.34 LRK55_RS06880 coniferyl aldehyde dehydrogenase 0.37 LRK55_RS05435 dTDP-4-dehydrorhamnose reductase — —
Rhodanobacter sp. FW510-T8 0.34 OKGIIK_16495 Aldehyde dehydrogenase 0.36 OKGIIK_01160 rfbD dTDP-4-dehydrorhamnose reductase low > 52
Variovorax sp. OAS795 0.34 ABID97_RS26110 coniferyl aldehyde dehydrogenase 0.38 ABID97_RS05665 dTDP-4-dehydrorhamnose reductase — —
Lysobacter sp. OAE881 0.34 ABIE51_RS01765 coniferyl aldehyde dehydrogenase 0.42 ABIE51_RS15605 dTDP-4-dehydrorhamnose reductase — —
Pedobacter sp. GW460-11-11-14-LB5 0.32 CA265_RS21385 aldehyde dehydrogenase family protein 0.39 CA265_RS19330 dTDP-4-dehydrorhamnose reductase low > 88
Pontibacter actiniarum KMM 6156, DSM 19842 0.31 CA264_09240 aldehyde dehydrogenase 0.18 CA264_19930 NAD(P)-dependent oxidoreductase — —
Synechococcus elongatus PCC 7942 0.30 Synpcc7942_0489 aldA aldehyde dehydrogenase 0.39 Synpcc7942_2099 rfbD dTDP-4-dehydrorhamnose reductase low > 38
Echinicola vietnamensis KMM 6221, DSM 17526 0.30 Echvi_1497 NAD-dependent aldehyde dehydrogenases 0.19 Echvi_1746 dTDP-4-dehydrorhamnose reductase — —
Alteromonas macleodii MIT1002 0.29 MIT1002_00534 Aldehyde dehydrogenase 0.34 MIT1002_03558 dTDP-4-dehydrorhamnose reductase — —
Mycobacterium tuberculosis H37Rv 0.28 Rv0147 Probable aldehyde dehydrogenase (NAD+) dependent 0.28 Rv3266c dTDP-6-deoxy-L-lyxo-4-hexulose reductase RmlD (dTDP-rhamnose modification protein) (dTDP-rhamnose biosynthesis protein) (dTDP-rhamnose synthase) — —
Desulfovibrio vulgaris Miyazaki F 0.18 DvMF_2633 Aldehyde Dehydrogenase (RefSeq) 0.27 DvMF_0140 dTDP-4-dehydrorhamnose reductase (RefSeq) low > 51

Not shown: 6 genomes with orthologs for HGI48_RS14500 only; 35 genomes with orthologs for HGI48_RS06770 only