Conservation of cofitness between HER17_RS06010 and HER17_RS20585 in Pectobacterium carotovorum WPP14

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS06010 Fe-S cluster assembly transcriptional regulator IscR 1.0 HER17_RS20585 Sec-independent protein translocase subunit TatC 0.78 1
Dickeya dadantii 3937 0.95 DDA3937_RS15550 Fe-S cluster assembly transcriptional regulator IscR 0.90 DDA3937_RS20305 Sec-independent protein translocase subunit TatC
Dickeya dianthicola ME23 0.94 DZA65_RS16725 Fe-S cluster assembly transcriptional regulator IscR 0.90 DZA65_RS00980 Sec-independent protein translocase subunit TatC low > 75
Dickeya dianthicola 67-19 0.94 HGI48_RS15650 Fe-S cluster assembly transcriptional regulator IscR 0.88 HGI48_RS00920 Sec-independent protein translocase subunit TatC
Serratia liquefaciens MT49 0.92 IAI46_19360 Fe-S cluster assembly transcriptional regulator IscR 0.90 IAI46_01090 Sec-independent protein translocase subunit TatC low > 86
Rahnella sp. WP5 0.88 EX31_RS20550 Fe-S cluster assembly transcriptional regulator IscR 0.88 EX31_RS14600 Sec-independent protein translocase subunit TatC low > 89
Erwinia tracheiphila SCR3 0.86 LU632_RS17875 iscR Fe-S cluster assembly transcriptional regulator IscR 0.83 LU632_RS23980 tatC Sec-independent protein translocase subunit TatC low > 74
Pantoea sp. MT58 0.82 IAI47_05000 Fe-S cluster assembly transcriptional regulator IscR 0.84 IAI47_18260 Sec-independent protein translocase subunit TatC
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF2436 Iron-sulfur cluster regulator IscR 0.81 GFF265 Twin-arginine translocation protein TatC low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_01178 HTH-type transcriptional regulator IscR 0.83 OHPLBJKB_04213 Sec-independent protein translocase protein TatC low > 73
Enterobacter sp. TBS_079 0.71 MPMX20_03412 HTH-type transcriptional regulator IscR 0.82 MPMX20_04442 Sec-independent protein translocase protein TatC low > 85
Escherichia coli ECRC100 0.71 OKFHMN_21615 iscR Fe-S cluster assembly transcriptional regulator IscR 0.83 OKFHMN_14275 tatC Sec-independent protein translocase subunit TatC low > 80
Escherichia coli ECRC62 0.71 BNILDI_12085 iscR Fe-S cluster assembly transcriptional regulator IscR 0.83 BNILDI_05125 tatC Sec-independent protein translocase subunit TatC low > 75
Escherichia coli ECRC102 0.71 NIAGMN_19385 iscR Fe-S cluster assembly transcriptional regulator IscR 0.83 NIAGMN_12030 tatC Sec-independent protein translocase subunit TatC
Escherichia coli BW25113 0.71 b2531 iscR DNA-binding transcriptional repressor (NCBI) 0.83 b3839 tatC TatABCE protein translocation system subunit (NCBI) low > 76
Escherichia coli Nissle 1917 0.71 ECOLIN_RS14370 Fe-S cluster assembly transcriptional regulator IscR 0.83 ECOLIN_RS22140 Sec-independent protein translocase subunit TatC low > 55
Escherichia coli ECOR38 0.71 HEPCGN_20755 iscR Fe-S cluster assembly transcriptional regulator IscR 0.83 HEPCGN_12905 tatC Sec-independent protein translocase subunit TatC
Enterobacter asburiae PDN3 0.71 EX28DRAFT_0108 transcriptional regulator, BadM/Rrf2 family 0.83 EX28DRAFT_4503 Twin arginine targeting (Tat) protein translocase TatC low > 76
Escherichia coli ECRC98 0.71 JDDGAC_25290 iscR Fe-S cluster assembly transcriptional regulator IscR 0.83 JDDGAC_17900 tatC Sec-independent protein translocase subunit TatC low > 86
Escherichia fergusonii Becca 0.71 EFB2_01359 HTH-type transcriptional regulator IscR 0.83 EFB2_04777 Sec-independent protein translocase protein TatC low > 86
Escherichia coli BL21 0.71 ECD_02423 isc operon transcriptional repressor; suf operon transcriptional activator; oxidative stress- and iron starvation-inducible; autorepressor 0.83 ECD_03731 TatABCE protein translocation system subunit low > 61
Escherichia coli ECRC99 0.71 KEDOAH_06605 iscR Fe-S cluster assembly transcriptional regulator IscR 0.83 KEDOAH_13875 tatC Sec-independent protein translocase subunit TatC
Escherichia coli ECRC101 0.71 MCAODC_12145 iscR Fe-S cluster assembly transcriptional regulator IscR 0.83 MCAODC_04780 tatC Sec-independent protein translocase subunit TatC low > 87
Escherichia coli ECOR27 0.71 NOLOHH_13285 iscR Fe-S cluster assembly transcriptional regulator IscR 0.83 NOLOHH_06405 tatC Sec-independent protein translocase subunit TatC low > 75
Alteromonas macleodii MIT1002 0.70 MIT1002_02802 HTH-type transcriptional regulator IscR 0.65 MIT1002_00508 Sec-independent protein translocase protein TatC
Klebsiella michiganensis M5al 0.70 BWI76_RS21165 Fe-S cluster assembly transcriptional regulator IscR 0.80 BWI76_RS01330 twin-arginine translocase subunit TatC low > 92
Shewanella amazonensis SB2B 0.66 Sama_1292 Rrf2 family protein (RefSeq) 0.60 Sama_3207 Sec-independent periplasmic protein translocation protein TatC (RefSeq) low > 62
Shewanella loihica PV-4 0.66 Shew_2318 BadM/Rrf2 family transcriptional regulator (RefSeq) 0.65 Shew_3378 Sec-independent protein translocase, TatC subunit (RefSeq)
Shewanella oneidensis MR-1 0.65 SO2263 Rrf2 family protein (NCBI ptt file) 0.69 SO4204 tatC Sec-independent periplasmic protein translocation protein TatC (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.65 Shewana3_2281 BadM/Rrf2 family transcriptional regulator (RefSeq) 0.64 Shewana3_3730 Sec-independent protein translocase TatC (RefSeq) low > 73
Pseudomonas sp. S08-1 0.61 OH686_17470 iron-sulfur cluster assembly transcription factor IscR 0.62 OH686_10180 twin arginine-targeting protein translocase TatC
Pseudomonas sp. RS175 0.61 PFR28_00285 HTH-type transcriptional regulator IscR 0.61 PFR28_04982 Sec-independent protein translocase protein TatC
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_06650 transcriptional regulator 0.61 AO356_09540 twin-arginine protein translocation system subunit TatC low > 104
Pseudomonas fluorescens FW300-N2E3 0.60 AO353_15830 transcriptional regulator 0.61 AO353_12345 twin-arginine protein translocation system subunit TatC low > 101
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_1236 transcriptional regulator, BadM/Rrf2 family 0.60 Psyr_0382 Sec-independent periplasmic protein translocase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_1236 transcriptional regulator, BadM/Rrf2 family 0.60 Psyr_0382 Sec-independent periplasmic protein translocase low > 86
Pseudomonas stutzeri RCH2 0.60 Psest_1250 iron-sulfur cluster assembly transcription factor IscR 0.58 Psest_3947 Twin arginine targeting (Tat) protein translocase TatC
Pseudomonas putida KT2440 0.59 PP_0841 DNA-binding transcriptional dual regulator 2Fe-2S cluster IscR 0.61 PP_5018 sec-independent protein translocase protein
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS24860 Fe-S cluster assembly transcriptional regulator IscR 0.62 PFLU_RS01880 twin-arginine translocase subunit TatC low > 109
Pseudomonas simiae WCS417 0.59 PS417_23205 transcriptional regulator 0.61 PS417_01835 twin-arginine protein translocation system subunit TatC
Pseudomonas fluorescens SBW25 0.59 PFLU_RS24860 Fe-S cluster assembly transcriptional regulator IscR 0.62 PFLU_RS01880 twin-arginine translocase subunit TatC low > 109
Kangiella aquimarina DSM 16071 0.55 B158DRAFT_1458 transcriptional regulator, BadM/Rrf2 family 0.51 B158DRAFT_0738 Twin arginine targeting (Tat) protein translocase TatC low > 40
Pseudomonas fluorescens FW300-N1B4 0.54 Pf1N1B4_866 Iron-sulfur cluster regulator IscR 0.62 Pf1N1B4_1569 Twin-arginine translocation protein TatC low > 87
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_4874 Iron-sulfur cluster regulator IscR 0.61 PfGW456L13_306 Twin-arginine translocation protein TatC
Acinetobacter radioresistens SK82 0.50 MPMX26_01328 HTH-type transcriptional regulator IscR 0.43 MPMX26_00396 Sec-independent protein translocase protein TatC low > 36
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS15775 DNA-binding protein 0.46 HSERO_RS20285 twin-arginine protein translocation system subunit TatC
Marinobacter adhaerens HP15 0.49 HP15_1487 transcriptional regulator, BadM/Rrf2 family 0.57 HP15_3198 Sec-independent protein translocase, TatC subunit
Dechlorosoma suillum PS 0.48 Dsui_2369 iron-sulfur cluster assembly transcription factor IscR 0.51 Dsui_1424 twin arginine targeting protein translocase subunit TatC
Castellaniella sp019104865 MT123 0.47 ABCV34_RS05100 Fe-S cluster assembly transcriptional regulator IscR 0.49 ABCV34_RS11280 twin-arginine translocase subunit TatC
Azospirillum sp. SherDot2 0.44 MPMX19_01654 HTH-type transcriptional regulator IscR 0.34 MPMX19_04320 Sec-independent protein translocase protein TatC
Rhodospirillum rubrum S1H 0.44 Rru_A2028 Transcriptional Regulator, BadM/Rrf2 family (NCBI) 0.34 Rru_A1771 Sec-independent periplasmic protein translocase (NCBI)
Azospirillum brasilense Sp245 0.44 AZOBR_RS05830 Rrf2 family transcriptional regulator 0.35 AZOBR_RS15480 preprotein translocase subunit TatC
Magnetospirillum magneticum AMB-1 0.43 AMB_RS15265 Rrf2 family transcriptional regulator 0.32 AMB_RS12685 twin-arginine translocase subunit TatC
Brevundimonas sp. GW460-12-10-14-LB2 0.42 A4249_RS04565 Rrf2 family transcriptional regulator 0.25 A4249_RS05665 twin-arginine translocase subunit TatC
Dinoroseobacter shibae DFL-12 0.35 Dshi_1633 transcriptional regulator, BadM/Rrf2 family (RefSeq) 0.25 Dshi_1345 Sec-independent protein translocase, TatC subunit (RefSeq)
Phaeobacter inhibens DSM 17395 0.35 PGA1_c15350 putative transcriptional regulator 0.26 PGA1_c10720 putative sec-independent protein translocase protein TatC
Desulfovibrio vulgaris Miyazaki F 0.31 DvMF_2591 transcriptional regulator, BadM/Rrf2 family (RefSeq) 0.36 DvMF_3123 Sec-independent protein translocase, TatC subunit (RefSeq)
Desulfovibrio vulgaris Hildenborough JW710 0.30 DVU0529 rrf2 Rrf2 protein (voordouw) 0.35 DVU1041 tatC Sec-independent protein translocase TatC (TIGR)
Sinorhizobium meliloti 1021 0.22 SM_b20994 hypothetical protein 0.31 SMc02065 SEC-independent translocase transmembrane protein
Sphingomonas koreensis DSMZ 15582 0.18 Ga0059261_1470 transcriptional regulator, BadM/Rrf2 family 0.27 Ga0059261_3486 Twin arginine targeting (Tat) protein translocase TatC
Mycobacterium tuberculosis H37Rv 0.17 Rv1287 Conserved hypothetical protein 0.23 Rv2093c Sec-independent protein translocase transmembrane protein TatC

Not shown: 2 genomes with orthologs for HER17_RS06010 only; 34 genomes with orthologs for HER17_RS20585 only