Conservation of cofitness between HER17_RS00495 and HER17_RS12795 in Pectobacterium carotovorum WPP14

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00495 branched-chain amino acid ABC transporter substrate-binding protein 1.0 HER17_RS12795 S-formylglutathione hydrolase 0.98 2
Dickeya dadantii 3937 0.91 DDA3937_RS00660 branched-chain amino acid ABC transporter substrate-binding protein 0.77 DDA3937_RS09320 S-formylglutathione hydrolase 0.42 15
Rahnella sp. WP5 0.88 EX31_RS14805 branched-chain amino acid ABC transporter substrate-binding protein 0.81 EX31_RS18720 S-formylglutathione hydrolase low > 89
Dickeya dianthicola 67-19 0.88 HGI48_RS20730 high-affinity branched-chain amino acid ABC transporter substrate-binding protein 0.76 HGI48_RS09345 S-formylglutathione hydrolase low > 71
Dickeya dianthicola ME23 0.88 DZA65_RS21740 branched-chain amino acid ABC transporter substrate-binding protein 0.77 DZA65_RS09650 S-formylglutathione hydrolase low > 75
Serratia liquefaciens MT49 0.87 IAI46_00960 branched-chain amino acid ABC transporter substrate-binding protein 0.77 IAI46_07880 S-formylglutathione hydrolase low > 86
Erwinia tracheiphila SCR3 0.82 LU632_RS19255 branched-chain amino acid ABC transporter substrate-binding protein 0.71 LU632_RS17275 fghA S-formylglutathione hydrolase low > 74
Escherichia coli ECOR27 0.79 NOLOHH_08535 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.71 NOLOHH_15085 yeiG S-formylglutathione hydrolase low > 75
Escherichia coli ECRC102 0.79 NIAGMN_14510 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.71 NIAGMN_21275 yeiG S-formylglutathione hydrolase
Escherichia coli BW25113 0.79 b3458 livK leucine transporter subunit (NCBI) 0.71 b2154 yeiG predicted esterase (NCBI) low > 76
Escherichia coli ECRC99 0.79 KEDOAH_11400 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.71 KEDOAH_04675 yeiG S-formylglutathione hydrolase
Escherichia coli ECRC62 0.79 BNILDI_02970 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.71 BNILDI_14005 yeiG S-formylglutathione hydrolase low > 75
Escherichia coli ECRC98 0.79 JDDGAC_20370 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.71 JDDGAC_27470 yeiG S-formylglutathione hydrolase low > 86
Escherichia coli ECRC100 0.79 OKFHMN_16740 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.71 OKFHMN_23510 yeiG S-formylglutathione hydrolase low > 80
Escherichia coli ECRC101 0.79 MCAODC_07270 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.71 MCAODC_14560 yeiG S-formylglutathione hydrolase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_00245 Leucine-specific-binding protein 0.71 OHPLBJKB_01557 S-formylglutathione hydrolase YeiG low > 73
Escherichia fergusonii Becca 0.79 EFB2_00364 Leucine-specific-binding protein 0.71 EFB2_01702 S-formylglutathione hydrolase YeiG low > 86
Escherichia coli ECOR38 0.79 HEPCGN_15560 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.71 HEPCGN_22780 yeiG S-formylglutathione hydrolase low > 87
Enterobacter asburiae PDN3 0.79 EX28DRAFT_4290 ABC-type branched-chain amino acid transport systems, periplasmic component 0.72 EX28DRAFT_0402 S-formylglutathione hydrolase low > 76
Escherichia coli Nissle 1917 0.79 ECOLIN_RS19775 high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.71 ECOLIN_RS12610 S-formylglutathione hydrolase low > 55
Escherichia coli BL21 0.78 ECD_03307 leucine transporter subunit 0.71 ECD_02083 S-formylglutathione hydrolase low > 61
Enterobacter sp. TBS_079 0.78 MPMX20_04334 Leucine-specific-binding protein 0.71 MPMX20_03125 S-formylglutathione hydrolase YeiG low > 85
Pantoea sp. MT58 0.78 IAI47_01565 branched-chain amino acid ABC transporter substrate-binding protein 0.75 IAI47_06700 S-formylglutathione hydrolase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF545 High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) 0.77 GFF3784 S-formylglutathione hydrolase (EC 3.1.2.12) low > 78
Klebsiella michiganensis M5al 0.77 BWI76_RS26350 branched chain amino acid ABC transporter substrate-binding protein 0.70 BWI76_RS19670 S-formylglutathione hydrolase low > 92
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_3845 L-leucine-binding protein / L-valine-binding protein / L-isoleucine-binding protein 0.59 Psyr_1368 Carboxylesterase low > 86
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_3845 L-leucine-binding protein / L-valine-binding protein / L-isoleucine-binding protein 0.59 Psyr_1368 Carboxylesterase 0.40 16
Pseudomonas stutzeri RCH2 0.61 Psest_1312 ABC-type branched-chain amino acid transport systems, periplasmic component 0.60 Psest_2815 S-formylglutathione hydrolase low > 67
Pseudomonas fluorescens FW300-N2C3 0.61 AO356_05320 leucine ABC transporter substrate-binding protein 0.59 AO356_05915 S-formylglutathione hydrolase low > 104
Pseudomonas fluorescens FW300-N2E3 0.61 AO353_17125 leucine ABC transporter substrate-binding protein 0.59 AO353_16585 S-formylglutathione hydrolase low > 101
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_2921 ABC transporter for L-leucine/L-phenylalanine/D-alanine, substrate-binding component LivK (from data) 0.59 Pf6N2E2_3043 S-formylglutathione hydrolase (EC 3.1.2.12) low > 103
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_3218 High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) 0.60 Pf1N1B4_3109 S-formylglutathione hydrolase (EC 3.1.2.12) low > 87
Pseudomonas fluorescens GW456-L13 0.60 PfGW456L13_4606 High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) 0.60 PfGW456L13_4681 S-formylglutathione hydrolase (EC 3.1.2.12) low > 87
Pseudomonas sp. S08-1 0.60 OH686_04605 Branched-chain amino acid ABC transporter, substrate-binding protein LivJ 0.60 OH686_18155 S-formylglutathione hydrolase low > 80
Pseudomonas putida KT2440 0.59 PP_1141 branched-chain amino acids ABC transporter - periplasmic leucine binding subunit 0.56 PP_1617 S-formylglutathione hydrolase / S-lactoylglutathione hydrolase low > 96
Pseudomonas sp. RS175 0.59 PFR28_00540 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein 0.60 PFR28_00421 S-formylglutathione hydrolase YeiG low > 88
Pseudomonas fluorescens SBW25 0.59 PFLU_RS06645 branched-chain amino acid ABC transporter substrate-binding protein 0.60 PFLU_RS06400 S-formylglutathione hydrolase low > 109
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS06645 branched-chain amino acid ABC transporter substrate-binding protein 0.60 PFLU_RS06400 S-formylglutathione hydrolase low > 109
Pseudomonas simiae WCS417 0.59 PS417_06615 ABC transporter for branched-chain amino acids, substrate-binding component (from data) 0.60 PS417_06335 S-formylglutathione hydrolase low > 88
Marinobacter adhaerens HP15 0.58 HP15_3055 high-affinity leucine-specific leucine-specific-binding periplasmic protein of high-affinity branched-chain amino acid ABC transporter transport system periplasmic binding protein 0.55 HP15_3909 carboxylesterase low > 73
Herbaspirillum seropedicae SmR1 0.51 HSERO_RS08270 amino acid ABC transporter substrate-binding protein 0.49 HSERO_RS13610 S-formylglutathione hydrolase low > 78
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS14425 leucine ABC transporter substrate-binding protein 0.48 RR42_RS28645 S-formylglutathione hydrolase low > 128
Castellaniella sp019104865 MT123 0.47 ABCV34_RS03585 branched-chain amino acid ABC transporter substrate-binding protein 0.58 ABCV34_RS09040 S-formylglutathione hydrolase low > 48
Azospirillum sp. SherDot2 0.38 MPMX19_04840 Leu/Ile/Val-binding protein 0.56 MPMX19_05325 S-formylglutathione hydrolase YeiG low > 112
Rhodospirillum rubrum S1H 0.38 Rru_A1746 Extracellular ligand-binding receptor (NCBI) 0.60 Rru_A3406 Carboxylesterase (NCBI) low > 58
Sinorhizobium meliloti 1021 0.37 SMc00078 Leu/Ile/Val-binding protein 0.56 SM_b20171 carboxylesterase low > 103
Rhizobium sp. OAE497 0.35 ABIE40_RS14690 branched-chain amino acid ABC transporter substrate-binding protein 0.49 ABIE40_RS09880 S-formylglutathione hydrolase low > 107
Bosea sp. OAE506 0.35 ABIE41_RS13610 branched-chain amino acid ABC transporter substrate-binding protein 0.46 ABIE41_RS09630 S-formylglutathione hydrolase low > 77
Azospirillum brasilense Sp245 0.33 AZOBR_RS08260 L-proline and D-alanine ABC transporter, substrate-binding component (from data) 0.58 AZOBR_RS16510 S-formylglutathione hydrolase low > 97
Agrobacterium fabrum C58 0.33 Atu2422 ABC transporter, substrate binding protein (amino acid) 0.50 Atu1476 esterase D low > 89
Variovorax sp. OAS795 0.30 ABID97_RS27585 branched-chain amino acid ABC transporter substrate-binding protein 0.47 ABID97_RS10225 S-formylglutathione hydrolase low > 91
Variovorax sp. SCN45 0.27 GFF237 ABC-type branched-chain amino acid transport systems, periplasmic component 0.47 GFF2943 S-formylglutathione hydrolase (EC 3.1.2.12) low > 127
Paraburkholderia bryophila 376MFSha3.1 0.25 H281DRAFT_02161 amino acid/amide ABC transporter substrate-binding protein, HAAT family 0.51 H281DRAFT_04165 S-formylglutathione hydrolase low > 103
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS00600 branched-chain amino acid ABC transporter substrate-binding protein 0.50 QEN71_RS02560 S-formylglutathione hydrolase low > 153
Paraburkholderia graminis OAS925 0.25 ABIE53_000461 branched-chain amino acid transport system substrate-binding protein 0.51 ABIE53_003401 S-formylglutathione hydrolase low > 113
Burkholderia phytofirmans PsJN 0.24 BPHYT_RS01885 branched-chain amino acid ABC transporter substrate-binding protein 0.59 BPHYT_RS00495 S-formylglutathione hydrolase low > 109
Ralstonia solanacearum IBSBF1503 0.24 RALBFv3_RS04695 branched-chain amino acid ABC transporter substrate-binding protein 0.48 RALBFv3_RS12340 S-formylglutathione hydrolase low > 76
Ralstonia solanacearum UW163 0.24 UW163_RS08975 branched-chain amino acid ABC transporter substrate-binding protein 0.48 UW163_RS01265 S-formylglutathione hydrolase
Ralstonia solanacearum PSI07 0.24 RPSI07_RS12690 branched-chain amino acid ABC transporter substrate-binding protein 0.48 RPSI07_RS20970 S-formylglutathione hydrolase low > 81
Ralstonia solanacearum GMI1000 0.24 RS_RS12255 branched-chain amino acid ABC transporter substrate-binding protein 0.47 RS_RS03025 S-formylglutathione hydrolase low > 80
Ralstonia sp. UNC404CL21Col 0.23 ABZR87_RS00315 branched-chain amino acid ABC transporter substrate-binding protein 0.47 ABZR87_RS08280 S-formylglutathione hydrolase low > 80
Acidovorax sp. GW101-3H11 0.20 Ac3H11_4169 Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) 0.49 Ac3H11_3164 S-formylglutathione hydrolase (EC 3.1.2.12) low > 79
Dinoroseobacter shibae DFL-12 0.12 Dshi_1522 Extracellular ligand-binding receptor (RefSeq) 0.52 Dshi_0474 S-formylglutathione hydrolase (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.10 PGA1_c15890 extracellular ligand-binding receptor 0.54 PGA1_c31600 S-formylglutathione hydrolase FghA low > 62

Not shown: 6 genomes with orthologs for HER17_RS00495 only; 19 genomes with orthologs for HER17_RS12795 only