Conservation of cofitness between HER17_RS15710 and HER17_RS06890 in Pectobacterium carotovorum WPP14

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS15710 adenine phosphoribosyltransferase 1.0 HER17_RS06890 fatty acid oxidation complex subunit alpha FadJ 0.60 17
Dickeya dianthicola ME23 0.87 DZA65_RS06150 adenine phosphoribosyltransferase 0.64 DZA65_RS15485 fatty acid oxidation complex subunit alpha FadJ low > 75
Dickeya dadantii 3937 0.86 DDA3937_RS05775 adenine phosphoribosyltransferase 0.62 DDA3937_RS14600 fatty acid oxidation complex subunit alpha FadJ low > 74
Dickeya dianthicola 67-19 0.86 HGI48_RS05825 adenine phosphoribosyltransferase 0.64 HGI48_RS14550 fatty acid oxidation complex subunit alpha FadJ low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.82 GFF4387 Adenine phosphoribosyltransferase (EC 2.4.2.7) 0.58 GFF1954 Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) low > 78
Enterobacter sp. TBS_079 0.80 MPMX20_01071 Adenine phosphoribosyltransferase 0.58 MPMX20_03268 Fatty acid oxidation complex subunit alpha low > 85
Klebsiella michiganensis M5al 0.80 BWI76_RS06815 adenine phosphoribosyltransferase 0.56 BWI76_RS20455 multifunctional fatty acid oxidation complex subunit alpha low > 92
Escherichia coli HS(pFamp)R (ATCC 700891) 0.80 OHPLBJKB_03205 Adenine phosphoribosyltransferase 0.59 OHPLBJKB_01365 Fatty acid oxidation complex subunit alpha low > 73
Escherichia coli ECOR38 0.80 HEPCGN_06785 apt adenine phosphoribosyltransferase 0.57 HEPCGN_21755 fadJ fatty acid oxidation complex subunit alpha FadJ low > 87
Escherichia coli Nissle 1917 0.80 ECOLIN_RS02790 adenine phosphoribosyltransferase 0.58 ECOLIN_RS13550 fatty acid oxidation complex subunit alpha FadJ — —
Escherichia coli ECOR27 0.80 NOLOHH_01100 apt adenine phosphoribosyltransferase 0.57 NOLOHH_14195 fadJ fatty acid oxidation complex subunit alpha FadJ low > 75
Escherichia coli ECRC62 0.80 BNILDI_22520 apt adenine phosphoribosyltransferase 0.57 BNILDI_13110 fadJ fatty acid oxidation complex subunit alpha FadJ low > 75
Escherichia fergusonii Becca 0.80 EFB2_03589 Adenine phosphoribosyltransferase 0.57 EFB2_01518 Fatty acid oxidation complex subunit alpha low > 86
Serratia liquefaciens MT49 0.80 IAI46_05225 adenine phosphoribosyltransferase 0.66 IAI46_18045 fatty acid oxidation complex subunit alpha FadJ low > 86
Escherichia coli BW25113 0.80 b0469 apt adenine phosphoribosyltransferase (NCBI) 0.57 b2341 yfcX fused enoyl-CoA hydratase and epimerase and isomerase/3-hydroxyacyl-CoA dehydrogenase (NCBI) low > 76
Escherichia coli BL21 0.80 ECD_00420 adenine phosphoribosyltransferase 0.57 ECD_02265 enoyl-CoA hydratase/epimerase and isomerase/3-hydroxyacyl-CoA dehydrogenase low > 61
Escherichia coli ECRC102 0.79 NIAGMN_06225 apt adenine phosphoribosyltransferase 0.57 NIAGMN_20335 fadJ fatty acid oxidation complex subunit alpha FadJ — —
Enterobacter asburiae PDN3 0.79 EX28DRAFT_2489 adenine phosphoribosyltransferase (EC 2.4.2.7) 0.58 EX28DRAFT_0271 fatty oxidation complex, alpha subunit FadJ low > 76
Escherichia coli ECRC98 0.79 JDDGAC_11820 apt adenine phosphoribosyltransferase 0.57 JDDGAC_26520 fadJ fatty acid oxidation complex subunit alpha FadJ low > 86
Escherichia coli ECRC100 0.79 OKFHMN_08170 apt adenine phosphoribosyltransferase 0.57 OKFHMN_22560 fadJ fatty acid oxidation complex subunit alpha FadJ low > 80
Escherichia coli ECRC99 0.79 KEDOAH_19795 apt adenine phosphoribosyltransferase 0.57 KEDOAH_05635 fadJ fatty acid oxidation complex subunit alpha FadJ — —
Escherichia coli ECRC101 0.79 MCAODC_27395 apt adenine phosphoribosyltransferase 0.57 MCAODC_13590 fadJ fatty acid oxidation complex subunit alpha FadJ low > 87
Rahnella sp. WP5 0.78 EX31_RS22505 adenine phosphoribosyltransferase 0.62 EX31_RS19705 fatty acid oxidation complex subunit alpha FadJ low > 89
Pantoea sp. MT58 0.74 IAI47_14480 adenine phosphoribosyltransferase 0.59 IAI47_06130 fatty acid oxidation complex subunit alpha FadJ low > 76
Shewanella loihica PV-4 0.72 Shew_2236 adenine phosphoribosyltransferase (RefSeq) 0.51 Shew_2425 fadJ multifunctional fatty acid oxidation complex subunit alpha (RefSeq) low > 60
Shewanella amazonensis SB2B 0.70 Sama_1309 adenine phosphoribosyltransferase (RefSeq) 0.50 Sama_2167 fadJ multifunctional fatty acid oxidation complex subunit alpha (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.70 CSW01_05360 adenine phosphoribosyltransferase 0.52 CSW01_05330 fatty acid oxidation complex subunit alpha FadJ low > 62
Shewanella sp. ANA-3 0.70 Shewana3_2447 adenine phosphoribosyltransferase (RefSeq) 0.52 Shewana3_1461 fadJ multifunctional fatty acid oxidation complex subunit alpha (RefSeq) low > 73
Shewanella oneidensis MR-1 0.69 SO2012 apt adenine phosphoribosyltransferase (NCBI ptt file) 0.51 SO3088 fatty oxidation complex, alpha subunit (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.65 MIT1002_02655 Adenine phosphoribosyltransferase 0.50 MIT1002_01287 Fatty acid oxidation complex subunit alpha low > 70
Sinorhizobium meliloti 1021 0.51 SMc02698 adenine phosphoribosyltransferase 0.26 SMc02227 fatty oxidation complex enoyl-COA hydratase/3-hydroxyacyl-COA dehydrogenase/3-hydroxybutyryl-COA epimerase low > 103
Agrobacterium fabrum C58 0.51 Atu2236 adenine phosphoribosyltransferase 0.25 Atu0503 enoyl-CoA hydratase low > 89
Bosea sp. OAE506 0.50 ABIE41_RS11210 adenine phosphoribosyltransferase 0.28 ABIE41_RS23310 FAD-dependent oxidoreductase low > 77
Rhodopseudomonas palustris CGA009 0.49 TX73_023325 adenine phosphoribosyltransferase 0.26 TX73_004220 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein low > 86
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF2440 Adenine phosphoribosyltransferase (EC 2.4.2.7) 0.25 GFF875 Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) low > 90
Acidovorax sp. GW101-3H11 0.49 Ac3H11_4267 Adenine phosphoribosyltransferase (EC 2.4.2.7) 0.23 Ac3H11_1931 Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) low > 79
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS02125 adenine phosphoribosyltransferase 0.22 RR42_RS22630 3-hydroxyacyl-CoA dehydrogenase low > 128
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS07105 adenine phosphoribosyltransferase 0.27 ABZR87_RS23345 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein low > 80
Phaeobacter inhibens DSM 17395 0.48 PGA1_c06370 adenine phosphoribosyltransferase Apt 0.23 PGA1_c12020 fatty acid oxidation complex FadJ subunit alpha low > 62
Sphingomonas koreensis DSMZ 15582 0.48 Ga0059261_3222 adenine phosphoribosyltransferase (EC 2.4.2.7) 0.22 Ga0059261_0837 3-hydroxyacyl-CoA dehydrogenase low > 68
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS01790 adenine phosphoribosyltransferase 0.23 QEN71_RS21890 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein low > 153
Dinoroseobacter shibae DFL-12 0.47 Dshi_2074 adenine phosphoribosyltransferase (RefSeq) 0.24 Dshi_0835 3-hydroxyacyl-CoA dehydrogenase NAD-binding (RefSeq) low > 64
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS02940 adenine phosphoribosyltransferase 0.23 BPHYT_RS09560 3-hydroxyacyl-CoA dehydrogenase low > 109
Dechlorosoma suillum PS 0.46 Dsui_2706 adenine phosphoribosyltransferase 0.23 Dsui_0323 3-hydroxyacyl-CoA dehydrogenase low > 51
Castellaniella sp019104865 MT123 0.45 ABCV34_RS14375 adenine phosphoribosyltransferase 0.21 ABCV34_RS09055 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein low > 48
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_01920 adenine phosphoribosyltransferase 0.24 H281DRAFT_00916 short chain enoyl-CoA hydratase /3-hydroxyacyl-CoA dehydrogenase low > 103
Azospirillum sp. SherDot2 0.44 MPMX19_06118 Adenine phosphoribosyltransferase 0.22 MPMX19_06944 Fatty acid oxidation complex subunit alpha low > 112
Paraburkholderia graminis OAS925 0.43 ABIE53_000725 adenine phosphoribosyltransferase 0.23 ABIE53_002151 3-hydroxyacyl-CoA dehydrogenase low > 113
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS19335 adenine phosphoribosyltransferase 0.24 ABZR86_RS07195 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein low > 74
Magnetospirillum magneticum AMB-1 0.42 AMB_RS14345 adenine phosphoribosyltransferase 0.22 AMB_RS15050 multifunctional fatty acid oxidation complex subunit alpha low > 64
Rhodanobacter sp. FW510-T8 0.41 OKGIIK_01965 adenine phosphoribosyltransferase 0.25 OKGIIK_07915 3-hydroxyacyl-CoA dehydrogenase low > 52
Lysobacter sp. OAE881 0.40 ABIE51_RS05465 adenine phosphoribosyltransferase 0.27 ABIE51_RS13895 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein low > 62
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.2273.1 Adenine phosphoribosyltransferase (EC 2.4.2.7) 0.26 Xcc-8004.3683.1 Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) low > 74
Rhodanobacter denitrificans FW104-10B01 0.34 LRK54_RS04790 adenine phosphoribosyltransferase 0.24 LRK54_RS16925 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein low > 59
Rhodanobacter denitrificans MT42 0.34 LRK55_RS04570 adenine phosphoribosyltransferase 0.24 LRK55_RS16640 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein low > 63

Not shown: 34 genomes with orthologs for HER17_RS15710 only; 6 genomes with orthologs for HER17_RS06890 only