Conservation of cofitness between HER17_RS12935 and HER17_RS01530 in Pectobacterium carotovorum WPP14

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12935 microcin C ABC transporter ATP-binding protein YejF 1.0 HER17_RS01530 DeoR/GlpR family transcriptional regulator 0.54 16
Dickeya dadantii 3937 0.76 DDA3937_RS09175 microcin C ABC transporter ATP-binding protein YejF 0.97 DDA3937_RS19670 DeoR/GlpR family transcriptional regulator low > 74
Dickeya dianthicola 67-19 0.75 HGI48_RS09215 microcin C ABC transporter ATP-binding protein YejF 0.96 HGI48_RS19800 DeoR/GlpR family transcriptional regulator low > 71
Dickeya dianthicola ME23 0.75 DZA65_RS09520 microcin C ABC transporter ATP-binding protein YejF 0.96 DZA65_RS20890 DeoR/GlpR family transcriptional regulator
Klebsiella michiganensis M5al 0.72 BWI76_RS19795 microcin C ABC transporter ATP-binding protein YejF 0.80 BWI76_RS26175 DeoR/GlpR family transcriptional regulator low > 92
Enterobacter sp. TBS_079 0.72 MPMX20_03146 putative ABC transporter ATP-binding protein YejF 0.80 MPMX20_04306 Glycerol-3-phosphate regulon repressor low > 85
Rahnella sp. WP5 0.72 EX31_RS19145 microcin C ABC transporter ATP-binding protein YejF 0.89 EX31_RS04995 DeoR/GlpR family transcriptional regulator low > 89
Enterobacter asburiae PDN3 0.72 EX28DRAFT_0381 ABC-type uncharacterized transport system, duplicated ATPase component 0.80 EX28DRAFT_4123 transcriptional regulator, DeoR family low > 76
Erwinia tracheiphila SCR3 0.71 LU632_RS17580 yejF microcin C ABC transporter ATP-binding protein YejF 0.86 LU632_RS23005 DeoR/GlpR family transcriptional regulator low > 74
Escherichia coli BW25113 0.70 b2180 yejF fused predicted oligopeptide transporter subunits of ABC superfamilly: ATP-binding components (NCBI) 0.80 b3423 glpR DNA-binding transcriptional repressor (NCBI) low > 76
Escherichia coli ECRC99 0.70 KEDOAH_04810 yejF microcin C ABC transporter ATP-binding protein YejF 0.80 KEDOAH_11200 glpR DeoR/GlpR family transcriptional regulator
Escherichia coli ECRC100 0.70 OKFHMN_23375 yejF microcin C ABC transporter ATP-binding protein YejF 0.80 OKFHMN_16940 glpR DeoR/GlpR family transcriptional regulator low > 80
Escherichia coli ECRC102 0.70 NIAGMN_21140 yejF microcin C ABC transporter ATP-binding protein YejF 0.80 NIAGMN_14710 glpR DeoR/GlpR family transcriptional regulator
Escherichia coli ECRC101 0.70 MCAODC_14425 yejF microcin C ABC transporter ATP-binding protein YejF 0.80 MCAODC_07470 glpR DeoR/GlpR family transcriptional regulator low > 87
Escherichia coli ECRC98 0.70 JDDGAC_27335 yejF microcin C ABC transporter ATP-binding protein YejF 0.80 JDDGAC_20570 glpR DeoR/GlpR family transcriptional regulator low > 86
Escherichia coli Nissle 1917 0.70 ECOLIN_RS12745 microcin C ABC transporter ATP-binding protein YejF 0.80 ECOLIN_RS19540 DeoR/GlpR family transcriptional regulator
Escherichia fergusonii Becca 0.70 EFB2_01676 putative ABC transporter ATP-binding protein YejF 0.80 EFB2_00406 Glycerol-3-phosphate regulon repressor low > 86
Escherichia coli ECRC62 0.70 BNILDI_13870 yejF microcin C ABC transporter ATP-binding protein YejF 0.80 BNILDI_02780 glpR DeoR/GlpR family transcriptional regulator low > 75
Escherichia coli ECOR27 0.70 NOLOHH_14950 yejF microcin C ABC transporter ATP-binding protein YejF 0.80 NOLOHH_08735 glpR DeoR/GlpR family transcriptional regulator low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_01529 putative ABC transporter ATP-binding protein YejF 0.80 OHPLBJKB_00281 Glycerol-3-phosphate regulon repressor low > 73
Escherichia coli ECOR38 0.70 HEPCGN_22640 yejF microcin C ABC transporter ATP-binding protein YejF 0.80 HEPCGN_15760 glpR DeoR/GlpR family transcriptional regulator low > 87
Escherichia coli BL21 0.70 ECD_02110 microcin C ABC transporter ATPase 0.80 ECD_03274 DNA-binding transcriptional repressor low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.69 GFF3756 Putative ABC transporter ATP-binding protein 0.80 GFF590 Glycerol-3-phosphate regulon repressor, DeoR family low > 78
Serratia liquefaciens MT49 0.68 IAI46_17330 microcin C ABC transporter ATP-binding protein YejF 0.93 IAI46_23910 DeoR/GlpR family transcriptional regulator low > 86
Pantoea sp. MT58 0.67 IAI47_06600 microcin C ABC transporter ATP-binding protein YejF 0.87 IAI47_01765 DeoR/GlpR family transcriptional regulator low > 76
Vibrio cholerae E7946 ATCC 55056 0.60 CSW01_17170 ABC transporter ATP-binding protein 0.67 CSW01_18830 DeoR/GlpR family transcriptional regulator low > 62
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_1755 ABC transporter 0.57 Psyr_3906 regulatory protein, DeoR low > 86
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_1755 ABC transporter 0.57 Psyr_3906 regulatory protein, DeoR low > 86
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_24450 microcin ABC transporter ATP-binding protein 0.58 AO356_18245 DeoR family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_581 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) 0.58 Pf6N2E2_5573 Glycerol-3-phosphate regulon repressor, DeoR family low > 103
Pseudomonas stutzeri RCH2 0.57 Psest_2064 ABC-type uncharacterized transport system, duplicated ATPase component 0.56 Psest_2774 Transcriptional regulators of sugar metabolism
Pseudomonas sp. S08-1 0.56 OH686_03615 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) 0.54 OH686_20365 Glycerol-3-phosphate regulon repressor GlpR low > 80
Pseudomonas sp. RS175 0.56 PFR28_01546 putative ABC transporter ATP-binding protein YejF 0.58 PFR28_03369 Glycerol-3-phosphate regulon repressor low > 88
Rhizobium sp. OAE497 0.56 ABIE40_RS00630 ABC transporter ATP-binding protein 0.42 ABIE40_RS17880 DeoR/GlpR family DNA-binding transcription regulator low > 107
Sinorhizobium meliloti 1021 0.56 SMc02829 ABC transporter ATP-binding protein 0.44 SMc02521 glycerol-3-phosphate regulon repressor transcription regulator protein
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_3346 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) 0.57 PfGW456L13_1733 Glycerol-3-phosphate regulon repressor, DeoR family low > 87
Bosea sp. OAE506 0.56 ABIE41_RS23985 ABC transporter ATP-binding protein 0.23 ABIE41_RS02380 DeoR/GlpR family DNA-binding transcription regulator
Azospirillum brasilense Sp245 0.55 AZOBR_RS03800 microcin ABC transporter ATP-binding protein 0.41 AZOBR_RS25600 DeoR faimly transcriptional regulator
Pseudomonas putida KT2440 0.55 PP_4150 microcin C transporter - ATP binding subunit 0.57 PP_1074 DNA-binding transcriptional repressor - GlpR-glycerol-3-phosphate low > 96
Agrobacterium fabrum C58 0.55 Atu0190 ABC transporter, nucleotide binding/ATPase protein (peptide) 0.43 Atu3898 DeoR family transcriptional regulator low > 89
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_23460 microcin ABC transporter ATP-binding protein 0.58 AO353_04185 DeoR family transcriptional regulator low > 101
Pseudomonas simiae WCS417 0.55 PS417_12190 microcin ABC transporter ATP-binding protein 0.58 PS417_05570 DeoR faimly transcriptional regulator low > 88
Dinoroseobacter shibae DFL-12 0.55 Dshi_0658 ABC transporter related (RefSeq) 0.44 Dshi_0631 transcriptional regulator, DeoR family (RefSeq) low > 64
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS12880 ABC transporter ATP-binding protein 0.57 PFLU_RS05655 DeoR/GlpR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25 0.55 PFLU_RS12880 ABC transporter ATP-binding protein 0.57 PFLU_RS05655 DeoR/GlpR family transcriptional regulator low > 109
Marinobacter adhaerens HP15 0.55 HP15_1810 peptide ABC transporter, ATP-binding protein 0.50 HP15_2167 transcriptional repressor for the dissimilation of sn-glycerol 3-phosphate, DeoR family protein low > 73
Phaeobacter inhibens DSM 17395 0.54 PGA1_c30150 oligopeptide/dipeptide ABC transporter, ATP-binding protein 0.32 PGA1_c08250 putative glycerol-3-phosphate regulon repressor glpR low > 62
Rhodopseudomonas palustris CGA009 0.54 TX73_019110 ABC transporter ATP-binding protein 0.43 TX73_022865 DeoR/GlpR family DNA-binding transcription regulator low > 86
Azospirillum sp. SherDot2 0.53 MPMX19_02171 putative ABC transporter ATP-binding protein YejF 0.46 MPMX19_05965 Glycerol-3-phosphate regulon repressor low > 112
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_5629 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) 0.57 Pf1N1B4_768 Glycerol-3-phosphate regulon repressor, DeoR family
Rhodospirillum rubrum S1H 0.53 Rru_A3169 ABC transporter component (NCBI) 0.22 Rru_A1265 Transcriptional Regulator, DeoR family (NCBI) low > 58
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS13370 microcin ABC transporter ATP-binding protein 0.46 RR42_RS13795 DeoR family transcriptional regulator
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS10695 ABC transporter ATP-binding protein 0.44 ABZR87_RS03015 DeoR/GlpR family DNA-binding transcription regulator low > 80
Ralstonia solanacearum GMI1000 0.45 RS_RS05865 ABC transporter ATP-binding protein 0.45 RS_RS15295 DeoR/GlpR transcriptional regulator low > 80
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_00563 microcin C transport system ATP-binding protein 0.49 H281DRAFT_04225 transcriptional regulator, DeoR family low > 103
Ralstonia solanacearum PSI07 0.45 RPSI07_RS18325 ABC transporter ATP-binding protein 0.46 RPSI07_RS09890 DeoR/GlpR transcriptional regulator low > 81
Ralstonia solanacearum UW163 0.44 UW163_RS12520 ABC transporter ATP-binding protein 0.45 UW163_RS06265 DeoR/GlpR transcriptional regulator
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS15050 ABC transporter ATP-binding protein 0.45 RALBFv3_RS07355 DeoR/GlpR transcriptional regulator low > 76
Paraburkholderia graminis OAS925 0.44 ABIE53_002547 microcin C transport system ATP-binding protein 0.47 ABIE53_003465 DeoR family glycerol-3-phosphate regulon repressor low > 113
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS12370 ABC transporter 0.48 BPHYT_RS16470 DeoR faimly transcriptional regulator low > 109
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS17130 ABC transporter 0.45 HSERO_RS04835 DeoR faimly transcriptional regulator
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS06185 dipeptide ABC transporter ATP-binding protein 0.50 QEN71_RS02250 DeoR/GlpR family DNA-binding transcription regulator low > 153
Variovorax sp. OAS795 0.42 ABID97_RS16505 dipeptide ABC transporter ATP-binding protein 0.45 ABID97_RS19960 DeoR/GlpR family DNA-binding transcription regulator
Alteromonas macleodii MIT1002 0.19 MIT1002_02937 Glutathione import ATP-binding protein GsiA 0.52 MIT1002_00199 Glycerol-3-phosphate regulon repressor low > 70

Not shown: 3 genomes with orthologs for HER17_RS12935 only; 11 genomes with orthologs for HER17_RS01530 only