Conservation of cofitness between GFF4028 and GFF832 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF4028 Flagellar hook-associated protein FliD 1.0 GFF832 '3'-to-5' exoribonuclease RNase R' transl_table=11 0.78 12
Escherichia coli ECOR27 0.75 NOLOHH_16390 fliD flagellar filament capping protein FliD 0.92 NOLOHH_04485 rnr ribonuclease R low > 57
Escherichia fergusonii Becca 0.47 EFB2_02021 Flagellar hook-associated protein 2 0.92 EFB2_04356 Ribonuclease R low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.47 OHPLBJKB_01805 Flagellar hook-associated protein 2 0.92 OHPLBJKB_03863 Ribonuclease R low > 73
Escherichia coli ECRC98 0.46 JDDGAC_00360 fliD flagellar filament capping protein FliD 0.92 JDDGAC_15860 rnr ribonuclease R — —
Escherichia coli ECRC101 0.46 OKFHMN_25770 fliD flagellar filament capping protein FliD 0.92 OKFHMN_12220 rnr ribonuclease R — —
Escherichia coli ECRC101 0.46 MCAODC_19620 fliD flagellar filament capping protein FliD 0.92 MCAODC_02735 rnr ribonuclease R — —
Escherichia coli ECRC102 0.46 NIAGMN_02280 fliD flagellar filament capping protein FliD 0.92 NIAGMN_10070 rnr ribonuclease R — —
Escherichia coli ECRC99 0.46 KEDOAH_02320 fliD flagellar filament capping protein FliD 0.92 KEDOAH_15935 rnr ribonuclease R — —
Escherichia coli BW25113 0.45 b1924 fliD flagellar capping protein (NCBI) 0.92 b4179 vacB putative enzyme (VIMSS) low > 76
Escherichia coli ECRC62 0.45 BNILDI_15180 fliD flagellar filament capping protein FliD 0.92 BNILDI_07005 rnr ribonuclease R — —
Escherichia coli Nissle 1917 0.45 ECOLIN_RS10985 flagellar filament capping protein FliD 0.92 ECOLIN_RS24265 ribonuclease R — —
Escherichia coli ECOR38 0.44 HEPCGN_04125 fliD flagellar filament capping protein FliD 0.92 HEPCGN_10450 rnr ribonuclease R low > 85
Erwinia tracheiphila SCR3 0.42 LU632_RS13840 fliD flagellar filament capping protein FliD 0.79 LU632_RS21750 rnr ribonuclease R low > 74
Pantoea sp. MT58 0.41 IAI47_08140 flagellar filament capping protein FliD 0.79 IAI47_02625 ribonuclease R low > 76
Rahnella sp. WP5 0.40 EX31_RS09460 flagellar filament capping protein FliD 0.77 EX31_RS08785 ribonuclease R low > 89
Serratia liquefaciens MT49 0.38 IAI46_15795 flagellar filament capping protein FliD 0.76 IAI46_01660 ribonuclease R low > 86
Enterobacter asburiae PDN3 0.37 EX28DRAFT_0622 Flagellar capping protein 0.92 EX28DRAFT_3376 ribonuclease R low > 76
Enterobacter sp. TBS_079 0.36 MPMX20_02855 Flagellar hook-associated protein 2 0.91 MPMX20_00460 Ribonuclease R low > 85
Pectobacterium carotovorum WPP14 0.35 HER17_RS08305 flagellar filament capping protein FliD 0.76 HER17_RS03835 ribonuclease R low > 75
Cupriavidus basilensis FW507-4G11 0.29 RR42_RS09270 flagellar hook protein 0.42 RR42_RS13065 ribonuclease R low > 128
Variovorax sp. SCN45 0.25 GFF5754 Flagellar cap protein FliD 0.35 GFF399 3'-to-5' exoribonuclease RNase R low > 127
Castellaniella sp019104865 MT123 0.23 ABCV34_RS05615 flagellar filament capping protein FliD 0.38 ABCV34_RS06625 ribonuclease R low > 48
Dickeya dadantii 3937 0.22 DDA3937_RS13345 flagellar filament capping protein FliD 0.76 DDA3937_RS17260 ribonuclease R low > 74
Dickeya dianthicola ME23 0.22 DZA65_RS13875 flagellar filament capping protein FliD 0.75 DZA65_RS18405 ribonuclease R low > 75
Dickeya dianthicola 67-19 0.22 HGI48_RS13390 flagellar filament capping protein FliD 0.75 HGI48_RS17315 ribonuclease R low > 71
Pseudomonas stutzeri RCH2 0.21 Psest_2505 Flagellar capping protein 0.49 Psest_0691 ribonuclease R low > 67
Rhodanobacter denitrificans MT42 0.21 LRK55_RS13205 flagellar filament capping protein FliD 0.43 LRK55_RS00235 ribonuclease R low > 63
Dyella japonica UNC79MFTsu3.2 0.20 ABZR86_RS20135 flagellar filament capping protein FliD 0.41 ABZR86_RS08270 ribonuclease R low > 74
Rhodanobacter sp. FW510-T8 0.20 OKGIIK_02715 Flagellar hook-associated protein 2 0.43 OKGIIK_06755 rnr ribonuclease R low > 52
Rhodanobacter denitrificans FW104-10B01 0.19 LRK54_RS13465 flagellar filament capping protein FliD 0.43 LRK54_RS00495 ribonuclease R low > 59
Burkholderia phytofirmans PsJN 0.18 BPHYT_RS19090 flagellar hook protein FliD 0.41 BPHYT_RS08455 ribonuclease R low > 109
Lysobacter sp. OAE881 0.17 ABIE51_RS16730 flagellar filament capping protein FliD 0.43 ABIE51_RS07475 ribonuclease R low > 62
Paraburkholderia bryophila 376MFSha3.1 0.17 H281DRAFT_02436 flagellar hook-associated protein 2 0.41 H281DRAFT_00712 RNAse R low > 103
Paraburkholderia graminis OAS925 0.16 ABIE53_000142 flagellar hook-associated protein 2 0.41 ABIE53_001940 ribonuclease R low > 113
Pseudomonas putida KT2440 0.16 PP_4376 flagellar filament capping protein 0.48 PP_4880 exoribonuclease R 0.31 78
Pseudomonas fluorescens GW456-L13 0.15 PfGW456L13_4360 Flagellar hook-associated protein FliD 0.49 PfGW456L13_144 3'-to-5' exoribonuclease RNase R low > 87
Acidovorax sp. GW101-3H11 0.15 Ac3H11_1400 Flagellar hook-associated protein FliD 0.35 Ac3H11_412 3'-to-5' exoribonuclease RNase R low > 79
Pseudomonas fluorescens FW300-N2E3 0.15 AO353_18645 flagellar cap protein FliD 0.49 AO353_13200 exoribonuclease R low > 101
Shewanella oneidensis MR-1 0.14 SO3235 fliD flagellar hook-associated protein FliD (NCBI ptt file) 0.56 SO3935 vacB ribonuclease R (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.14 Sama_2304 flagellar hook-associated 2-like protein (RefSeq) 0.54 Sama_3067 exoribonuclease II (RefSeq) low > 62
Shewanella loihica PV-4 0.14 Shew_1359 flagellar hook-associated 2 domain-containing protein (RefSeq) 0.57 Shew_3289 ribonuclease R (RefSeq) low > 60
Dechlorosoma suillum PS 0.14 Dsui_1781 flagellar capping protein 0.44 Dsui_3128 ribonuclease R low > 51
Pseudomonas simiae WCS417 0.14 PS417_19840 flagellar cap protein FliD 0.49 PS417_02555 exoribonuclease R low > 88
Shewanella sp. ANA-3 0.13 Shewana3_1335 flagellar hook-associated 2 domain-containing protein (RefSeq) 0.57 Shewana3_0697 RNAse R (RefSeq) low > 73
Pseudomonas fluorescens FW300-N1B4 0.13 Pf1N1B4_3596 Flagellar hook-associated protein FliD 0.48 Pf1N1B4_1403 3'-to-5' exoribonuclease RNase R low > 87
Pseudomonas sp. RS175 0.13 PFR28_00825 B-type flagellar hook-associated protein 2 0.49 PFR28_05130 Ribonuclease R low > 88
Pseudomonas fluorescens FW300-N2E2 0.13 Pf6N2E2_2600 Flagellar hook-associated protein FliD 0.49 Pf6N2E2_3607 3'-to-5' exoribonuclease RNase R low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.13 Psyr_3464 Flagellar hook-associated protein 2, N-terminal:Flagellar hook-associated 2, C-terminal:Flagellin hook IN 0.49 Psyr_0579 RNAse R low > 86
Pseudomonas syringae pv. syringae B728a 0.13 Psyr_3464 Flagellar hook-associated protein 2, N-terminal:Flagellar hook-associated 2, C-terminal:Flagellin hook IN 0.49 Psyr_0579 RNAse R low > 86
Pseudomonas fluorescens SBW25-INTG 0.13 PFLU_RS21810 flagellar filament capping protein FliD 0.49 PFLU_RS02625 ribonuclease R low > 109
Pseudomonas fluorescens SBW25 0.13 PFLU_RS21810 flagellar filament capping protein FliD 0.49 PFLU_RS02625 ribonuclease R low > 109
Paraburkholderia sabiae LMG 24235 0.12 QEN71_RS29095 flagellar filament capping protein FliD 0.41 QEN71_RS22925 ribonuclease R low > 153
Pseudomonas fluorescens FW300-N2C3 0.12 AO356_03870 flagellar hook protein FliD 0.49 AO356_08610 exoribonuclease R low > 104
Alteromonas macleodii MIT1002 0.11 MIT1002_01056 Flagellar cap protein 0.54 MIT1002_03606 Ribonuclease R low > 70
Xanthomonas campestris pv. campestris strain 8004 0.10 Xcc-8004.2791.1 Flagellar hook-associated protein FliD 0.41 Xcc-8004.3370.1 3'-to-5' exoribonuclease RNase R low > 74
Sphingomonas koreensis DSMZ 15582 0.06 Ga0059261_2058 Flagellar capping protein 0.21 Ga0059261_3266 ribonuclease R low > 68

Not shown: 1 genomes with orthologs for GFF4028 only; 35 genomes with orthologs for GFF832 only