Conservation of cofitness between GFF4893 and GFF829 in Hydrogenophaga sp. GW460-11-11-14-LB1

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF4893 Nitrogen regulation protein NR(I) 1.0 GFF829 DNA repair protein RecN 0.66 12
Acidovorax sp. GW101-3H11 0.90 Ac3H11_4095 Nitrogen regulation protein NR(I) 0.59 Ac3H11_3460 DNA repair protein RecN low > 79
Variovorax sp. SCN45 0.87 GFF965 Two-component transcriptional response regulator, LuxR family 0.59 GFF2357 DNA repair protein RecN — —
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS07355 LuxR family transcriptional regulator 0.44 RR42_RS05910 DNA repair protein — —
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_00464 two component transcriptional regulator, LuxR family 0.43 H281DRAFT_04692 DNA replication and repair protein RecN — —
Burkholderia phytofirmans PsJN 0.63 BPHYT_RS12850 LuxR family transcriptional regulator 0.42 BPHYT_RS03560 DNA repair protein — —
Paraburkholderia graminis OAS925 0.63 ABIE53_002795 FixJ family two-component response regulator 0.43 ABIE53_000856 DNA repair protein RecN (Recombination protein N) — —
Paraburkholderia sabiae LMG 24235 0.63 QEN71_RS05715 oxygen response regulator transcription factor FixJ 0.45 QEN71_RS26535 DNA repair protein RecN — —
Ralstonia solanacearum PSI07 0.61 RPSI07_RS15805 DNA-binding response regulator 0.45 RPSI07_RS11890 DNA repair protein RecN — —
Ralstonia solanacearum IBSBF1503 0.61 RALBFv3_RS01680 DNA-binding response regulator 0.45 RALBFv3_RS05415 DNA repair protein RecN — —
Castellaniella sp019104865 MT123 0.61 ABCV34_RS04170 response regulator transcription factor 0.43 ABCV34_RS07470 DNA repair protein RecN — —
Ralstonia solanacearum GMI1000 0.61 RS_RS08045 DNA-binding response regulator 0.44 RS_RS13275 DNA repair protein RecN low > 80
Ralstonia solanacearum UW163 0.61 UW163_RS14990 DNA-binding response regulator 0.45 UW163_RS08210 DNA repair protein RecN — —
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS13480 response regulator transcription factor 0.44 ABZR87_RS01065 DNA repair protein RecN — —
Dechlorosoma suillum PS 0.49 Dsui_1581 response regulator 0.42 Dsui_3072 DNA repair protein RecN low > 51
Magnetospirillum magneticum AMB-1 0.47 AMB_RS04570 DNA-binding response regulator 0.27 AMB_RS19520 DNA repair protein RecN — —
Marinobacter adhaerens HP15 0.45 HP15_1053 two component transcriptional regulator, LuxR family 0.34 HP15_3084 DNA repair protein RecN low > 73
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS06700 LuxR family transcriptional regulator 0.43 HSERO_RS03060 DNA repair protein 0.25 6
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_3749 Nitrogen regulation protein NR(I) 0.33 PfGW456L13_5106 DNA repair protein RecN low > 87
Dyella japonica UNC79MFTsu3.2 0.43 ABZR86_RS13745 response regulator 0.31 ABZR86_RS05665 DNA repair protein RecN — —
Shewanella loihica PV-4 0.42 Shew_3240 two component LuxR family transcriptional regulator (RefSeq) 0.32 Shew_1196 recombination and repair protein (RefSeq) low > 60
Rhodopseudomonas palustris CGA009 0.40 TX73_022010 response regulator FixJ 0.26 TX73_018240 DNA repair protein RecN — —
Shewanella sp. ANA-3 0.39 Shewana3_0637 two component LuxR family transcriptional regulator (RefSeq) 0.35 Shewana3_1104 recombination and repair protein (RefSeq) low > 73
Caulobacter crescentus NA1000 Δfur 0.39 CCNA_00795 two-component response regulator FixJ 0.23 CCNA_02062 DNA repair protein recN low > 67
Caulobacter crescentus NA1000 0.39 CCNA_00795 two-component response regulator FixJ 0.23 CCNA_02062 DNA repair protein recN low > 66
Sinorhizobium meliloti 1021 0.38 SMa1227 response regulator FixJ 0.28 SMc01877 DNA repair protein low > 103
Shewanella oneidensis MR-1 0.38 SO4157 DNA-binding response regulator (NCBI ptt file) 0.35 SO3462 recN DNA repair protein RecN (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.37 Sama_2399 response regulator receiver protein (RefSeq) 0.35 Sama_1026 recombination and repair protein (RefSeq) low > 62
Pseudomonas sp. S08-1 0.36 OH686_18645 Two-component transcriptional response regulator, LuxR family 0.36 OH686_17050 DNA repair protein RecN low > 80
Agrobacterium fabrum C58 0.36 Atu4774 two component response regulator 0.28 Atu2083 DNA repair protein RecN low > 89
Dickeya dadantii 3937 0.35 DDA3937_RS07235 response regulator transcription factor 0.35 DDA3937_RS04325 DNA repair protein RecN low > 74
Sphingomonas koreensis DSMZ 15582 0.35 Ga0059261_4074 two component transcriptional regulator, LuxR family 0.27 Ga0059261_1026 DNA repair protein RecN low > 68
Pseudomonas simiae WCS417 0.35 PS417_10320 hypothetical protein 0.33 PS417_24070 recombination and repair protein low > 88
Lysobacter sp. OAE881 0.35 ABIE51_RS09725 response regulator 0.29 ABIE51_RS11655 DNA repair protein RecN — —
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_4408 two-component response regulator 0.33 Pf1N1B4_1178 DNA repair protein RecN low > 87
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_1724 DNA-binding response regulator, LuxR family 0.34 Pf6N2E2_3370 DNA repair protein RecN — —
Pseudomonas sp. RS175 0.34 PFR28_02521 Response regulator protein TmoT 0.33 PFR28_00071 DNA repair protein RecN — —
Serratia liquefaciens MT49 0.34 IAI46_04860 response regulator transcription factor 0.35 IAI46_19635 DNA repair protein RecN low > 86
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_25435 nodulation protein NolW 0.33 AO356_07510 DNA repair protein RecN low > 104
Brevundimonas sp. GW460-12-10-14-LB2 0.33 A4249_RS15535 response regulator 0.20 A4249_RS02620 DNA repair protein RecN — —
Klebsiella michiganensis M5al 0.33 BWI76_RS14640 DNA-binding response regulator 0.35 BWI76_RS21560 DNA repair protein RecN — —
Dinoroseobacter shibae DFL-12 0.32 Dshi_2568 two component transcriptional regulator, LuxR family (RefSeq) 0.22 Dshi_2413 DNA repair protein RecN (RefSeq) low > 64
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.32 GFF3576 Tetrathionate reductase two-component response regulator 0.36 GFF4162 DNA repair protein RecN low > 78
Pantoea sp. MT58 0.32 IAI47_20275 response regulator transcription factor 0.35 IAI47_04810 DNA repair protein RecN low > 76

Not shown: 2 genomes with orthologs for GFF4893 only; 56 genomes with orthologs for GFF829 only