| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 1.0 | GFF199 | | Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) | 1.0 | GFF828 | | Hypothetical ATP-binding protein UPF0042, contains P-loop | 0.63 | 11 |
| Acidovorax sp. GW101-3H11 | 0.71 | Ac3H11_2881 | | Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) | 0.58 | Ac3H11_3459 | | Hypothetical ATP-binding protein UPF0042, contains P-loop | 0.31 | 3 |
| Paraburkholderia sabiae LMG 24235 | 0.70 | QEN71_RS25300 | | sugar ABC transporter ATP-binding protein | 0.45 | QEN71_RS01735 | | RNase adapter RapZ | low | > 153 |
| Variovorax sp. OAS795 | 0.69 | ABID97_RS00435 | | sugar ABC transporter ATP-binding protein | 0.56 | ABID97_RS23710 | | RNase adapter RapZ | low | > 91 |
| Burkholderia phytofirmans PsJN | 0.68 | BPHYT_RS04685 | | ABC transporter ATP-binding protein | 0.44 | BPHYT_RS02885 | | glmZ(sRNA)-inactivating NTPase | low | > 109 |
| Variovorax sp. SCN45 | 0.68 | GFF3690 | | ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) | 0.56 | GFF2356 | | RNase adapter protein RapZ | low | > 127 |
| Paraburkholderia graminis OAS925 | 0.67 | ABIE53_001218 | | ribose transport system ATP-binding protein | 0.43 | ABIE53_000714 | | UPF0042 nucleotide-binding protein | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.65 | H281DRAFT_00104 | | monosaccharide ABC transporter ATP-binding protein, CUT2 family | 0.44 | H281DRAFT_01931 | | UPF0042 nucleotide-binding protein | low | > 103 |
| Ralstonia sp. UNC404CL21Col | 0.41 | ABZR87_RS12025 | | sugar ABC transporter ATP-binding protein | 0.42 | ABZR87_RS07035 | | RNase adapter RapZ | low | > 80 |
| Pectobacterium carotovorum WPP14 | 0.39 | HER17_RS21545 | | ribose ABC transporter ATP-binding protein RbsA | 0.39 | HER17_RS20075 | | RNase adapter RapZ | low | > 75 |
| Pantoea sp. MT58 | 0.39 | IAI47_00355 | | ribose ABC transporter ATP-binding protein RbsA | 0.38 | IAI47_17200 | | RNase adapter RapZ | low | > 76 |
| Dinoroseobacter shibae DFL-12 | 0.39 | Dshi_2433 | | ABC transporter related (RefSeq) | 0.28 | Dshi_0209 | | hypothetical protein (RefSeq) | low | > 64 |
| Dickeya dadantii 3937 | 0.39 | DDA3937_RS00035 | | ribose ABC transporter ATP-binding protein RbsA | 0.39 | DDA3937_RS01515 | | RNase adapter RapZ | low | > 74 |
| Dickeya dianthicola 67-19 | 0.38 | HGI48_RS21330 | | ribose ABC transporter ATP-binding protein RbsA | 0.39 | HGI48_RS01430 | | RNase adapter RapZ | low | > 71 |
| Escherichia coli ECOR38 | 0.38 | HEPCGN_13455 | rbsA | ribose ABC transporter ATP-binding protein RbsA | 0.39 | HEPCGN_16800 | rapZ | RNase adapter RapZ | low | > 85 |
| Escherichia coli ECOR27 | 0.38 | NOLOHH_06880 | rbsA | ribose ABC transporter ATP-binding protein RbsA | 0.39 | NOLOHH_09725 | rapZ | RNase adapter RapZ | low | > 57 |
| Escherichia coli ECRC62 | 0.38 | BNILDI_04645 | rbsA | ribose ABC transporter ATP-binding protein RbsA | 0.39 | BNILDI_01810 | rapZ | RNase adapter RapZ | — | — |
| Escherichia coli BW25113 | 0.38 | b3749 | rbsA | fused D-ribose transporter subunits of ABC superfamily: ATP-binding components (NCBI) | 0.39 | b3205 | yhbJ | hypothetical protein (NCBI) | low | > 76 |
| Escherichia coli ECRC102 | 0.38 | NIAGMN_10555 | rbsA | Ribose import ATP-binding protein RbsA | 0.39 | NIAGMN_15685 | rapZ | RNase adapter RapZ | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.38 | OHPLBJKB_04304 | | Ribose import ATP-binding protein RbsA | 0.39 | OHPLBJKB_00495 | | RNase adapter protein RapZ | low | > 73 |
| Enterobacter sp. TBS_079 | 0.38 | MPMX20_00302 | | Ribose import ATP-binding protein RbsA | 0.39 | MPMX20_04111 | | RNase adapter protein RapZ | 0.16 | 62 |
| Escherichia coli ECRC98 | 0.38 | JDDGAC_16345 | rbsA | Ribose import ATP-binding protein RbsA | 0.39 | JDDGAC_21550 | rapZ | RNase adapter RapZ | — | — |
| Enterobacter asburiae PDN3 | 0.38 | EX28DRAFT_4216 | | ABC-type sugar transport system, ATPase component | 0.39 | EX28DRAFT_3259 | | Predicted P-loop-containing kinase | low | > 76 |
| Escherichia coli BL21 | 0.38 | ECD_03635 | | D-ribose ABC transporter ATPase | 0.39 | ECD_03070 | | adaptor protein for GlmZ/GlmY sRNA decay, glucosamine-6-phosphate-regulated; NTPase | low | > 60 |
| Escherichia coli ECRC99 | 0.38 | KEDOAH_15455 | rbsA | Ribose import ATP-binding protein RbsA | 0.39 | KEDOAH_10225 | rapZ | RNase adapter RapZ | — | — |
| Escherichia coli ECRC101 | 0.38 | MCAODC_03220 | rbsA | Ribose import ATP-binding protein RbsA | 0.39 | MCAODC_08445 | rapZ | RNase adapter RapZ | — | — |
| Escherichia coli Nissle 1917 | 0.38 | ECOLIN_RS21555 | | ribose ABC transporter ATP-binding protein RbsA | 0.39 | ECOLIN_RS18440 | | RNase adapter RapZ | low | > 52 |
| Escherichia fergusonii Becca | 0.38 | EFB2_04884 | | Ribose import ATP-binding protein RbsA | 0.39 | EFB2_00618 | | RNase adapter protein RapZ | 0.36 | 65 |
| Escherichia coli ECRC101 | 0.38 | OKFHMN_12710 | rbsA | Ribose import ATP-binding protein RbsA | 0.39 | OKFHMN_17925 | rapZ | RNase adapter RapZ | — | — |
| Serratia liquefaciens MT49 | 0.38 | IAI46_10095 | | sugar ABC transporter ATP-binding protein | 0.39 | IAI46_22485 | | RNase adapter RapZ | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.38 | GFF1708 | | Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) | 0.39 | GFF2949 | | Hypothetical ATP-binding protein UPF0042, contains P-loop | low | > 78 |
| Dickeya dianthicola ME23 | 0.38 | DZA65_RS22310 | | ribose ABC transporter ATP-binding protein RbsA | 0.39 | DZA65_RS01495 | | RNase adapter RapZ | low | > 75 |
| Herbaspirillum seropedicae SmR1 | 0.38 | HSERO_RS03640 | | D-mannose ABC transporter, ATPase component (from data) | 0.45 | HSERO_RS19535 | | nucleotide-binding protein | low | > 78 |
| Phaeobacter inhibens DSM 17395 | 0.38 | PGA1_c23060 | | ribose import ATP-binding protein RbsA | 0.27 | PGA1_c01180 | | Predicted P-loop-containing kinase | low | > 62 |
| Klebsiella michiganensis M5al | 0.38 | BWI76_RS14860 | | ABC transporter | 0.39 | BWI76_RS25280 | | RNase adaptor protein RapZ | low | > 92 |
| Pseudomonas simiae WCS417 | 0.38 | PS417_13635 | | D-ribose transporter ATP-binding protein | 0.38 | PS417_04330 | | glmZ(sRNA)-inactivating NTPase | — | — |
| Ralstonia solanacearum PSI07 | 0.37 | RPSI07_RS17910 | | sugar ABC transporter ATP-binding protein | 0.43 | RPSI07_RS22155 | | RNase adapter RapZ | low | > 81 |
| Ralstonia solanacearum IBSBF1503 | 0.37 | RALBFv3_RS15445 | | sugar ABC transporter ATP-binding protein | 0.43 | RALBFv3_RS11145 | | RNase adapter RapZ | low | > 76 |
| Ralstonia solanacearum UW163 | 0.37 | UW163_RS12905 | | sugar ABC transporter ATP-binding protein | 0.43 | UW163_RS02435 | | RNase adapter RapZ | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.37 | PFLU_RS15210 | | sugar ABC transporter ATP-binding protein | 0.38 | PFLU_RS04385 | | RNase adapter RapZ | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.37 | PFLU_RS15210 | | sugar ABC transporter ATP-binding protein | 0.38 | PFLU_RS04385 | | RNase adapter RapZ | low | > 109 |
| Rahnella sp. WP5 | 0.37 | EX31_RS06175 | | ribose ABC transporter ATP-binding protein RbsA | 0.39 | EX31_RS12385 | | RNase adapter RapZ | low | > 89 |
| Dyella japonica UNC79MFTsu3.2 | 0.37 | ABZR86_RS14415 | | D-xylose ABC transporter ATP-binding protein | 0.38 | ABZR86_RS19800 | | RNase adapter RapZ | low | > 74 |
| Vibrio cholerae E7946 ATCC 55056 | 0.36 | CSW01_14650 | | ribose import ATP-binding protein RbsA | 0.42 | CSW01_12830 | | RNase adaptor protein RapZ | low | > 62 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.36 | Psyr_3264 | | monosaccharide ABC transporter ATP-binding protein, CUT2 family | 0.35 | Psyr_4150 | | Uncharacterized P-loop ATPase protein UPF0042 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.36 | Psyr_3264 | | monosaccharide ABC transporter ATP-binding protein, CUT2 family | 0.35 | Psyr_4150 | | Uncharacterized P-loop ATPase protein UPF0042 | low | > 86 |
| Pseudomonas fluorescens FW300-N2E2 | 0.36 | Pf6N2E2_523 | | Inositol transport system ATP-binding protein | 0.37 | Pf6N2E2_3270 | | Hypothetical ATP-binding protein UPF0042, contains P-loop | low | > 103 |
| Pseudomonas fluorescens FW300-N2E3 | 0.36 | AO353_21385 | | m-Inositol ABC transporter, ATPase component (itaA) (from data) | 0.37 | AO353_05195 | | glmZ(sRNA)-inactivating NTPase | 0.20 | 35 |
| Pseudomonas fluorescens FW300-N2C3 | 0.36 | AO356_23205 | | D-ribose transporter ATP-binding protein | 0.37 | AO356_07050 | | glmZ(sRNA)-inactivating NTPase | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.36 | Pf1N1B4_4286 | | Inositol transport system ATP-binding protein | 0.37 | Pf1N1B4_1083 | | Hypothetical ATP-binding protein UPF0042, contains P-loop | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.36 | RR42_RS03360 | | fructose ABC transporter, ATPase component (FrcA) (from data) | 0.42 | RR42_RS02060 | | nucleotide-binding protein | low | > 128 |
| Ralstonia solanacearum GMI1000 | 0.35 | RS_RS05030 | | sugar ABC transporter ATP-binding protein | 0.43 | RS_RS01995 | | RNase adaptor protein RapZ | low | > 80 |
| Pseudomonas sp. RS175 | 0.35 | PFR28_02416 | | Galactose/methyl galactoside import ATP-binding protein MglA | 0.36 | PFR28_00170 | | RNase adapter protein RapZ | low | > 88 |
| Fusobacterium nucleatum SB010 | 0.34 | HUW76_06570 | | galactose/methyl galactoside ABC transporter ATP-binding protein MglA | 0.29 | HUW76_06700 | | RNase adapter RapZ | low | > 35 |
| Pseudomonas putida KT2440 | 0.34 | PP_2759 | | ribose ABC transporter - ATP-binding subunit | 0.37 | PP_0949 | | putative ATP-binding protein UPF0042 | low | > 96 |
| Bifidobacterium breve UCC2003 | 0.34 | BBR_RS17770 | | sugar ABC transporter ATP-binding protein | 0.29 | BBR_RS15525 | | RNase adapter RapZ | low | > 34 |
| Azospirillum brasilense Sp245 | 0.34 | AZOBR_RS31245 | | ABC transporter ATP-binding protein | 0.30 | AZOBR_RS30485 | | nucleotide-binding protein | low | > 97 |
| Pseudomonas fluorescens GW456-L13 | 0.33 | PfGW456L13_2121 | | L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2) | 0.37 | PfGW456L13_5017 | | Hypothetical ATP-binding protein UPF0042, contains P-loop | low | > 87 |
| Erwinia tracheiphila SCR3 | 0.33 | LU632_RS08525 | mglA | galactose/methyl galactoside ABC transporter ATP-binding protein MglA | 0.39 | LU632_RS21295 | rapZ | RNase adapter RapZ | 0.51 | 51 |
| Rhodospirillum rubrum S1H | 0.31 | Rru_A0249 | | ABC transporter component (NCBI) | 0.32 | Rru_A3448 | | Uncharacterized P-loop ATPase protein UPF0042 (NCBI) | low | > 58 |
| Shewanella sp. ANA-3 | 0.30 | Shewana3_2074 | | L-arabinose ABC transporter, ATPase component AraV (from data) | 0.39 | Shewana3_0669 | | hypothetical protein (RefSeq) | low | > 73 |
Not shown: 9 genomes with orthologs for GFF199 only; 21 genomes with orthologs for GFF828 only