Conservation of cofitness between Psest_0409 and Psest_0684 in Pseudomonas stutzeri RCH2

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0409 Putative homoserine kinase type II (protein kinase fold) 1.0 Psest_0684 GTP-binding protein HflX 0.18 14
Pseudomonas simiae WCS417 0.85 PS417_26025 serine/threonine protein kinase 0.80 PS417_02495 GTPase HflX low > 88
Pseudomonas fluorescens SBW25-INTG 0.85 PFLU_RS27670 serine/threonine protein kinase 0.80 PFLU_RS02575 GTPase HflX low > 109
Pseudomonas fluorescens SBW25 0.85 PFLU_RS27670 serine/threonine protein kinase 0.80 PFLU_RS02575 GTPase HflX low > 109
Pseudomonas fluorescens FW300-N2E2 0.84 Pf6N2E2_4755 YihE protein, required for LPS synthesis 0.85 Pf6N2E2_3613 GTP-binding protein HflX low > 103
Pseudomonas fluorescens FW300-N2C3 0.84 AO356_14115 serine/threonine protein kinase 0.84 AO356_08650 GTPase HflX low > 104
Pseudomonas sp. S08-1 0.84 OH686_10380 YihE protein, required for LPS synthesis 0.85 OH686_09465 GTP-binding protein HflX low > 80
Pseudomonas sp. RS175 0.84 PFR28_04107 Serine/threonine protein kinase RdoA 0.85 PFR28_05122 GTPase HflX low > 88
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_07545 serine/threonine protein kinase 0.84 AO353_13150 GTPase HflX low > 101
Pseudomonas fluorescens FW300-N1B4 0.84 Pf1N1B4_2481 YihE protein, required for LPS synthesis 0.85 Pf1N1B4_1411 GTP-binding protein HflX low > 87
Pseudomonas fluorescens GW456-L13 0.83 PfGW456L13_1143 YihE protein, required for LPS synthesis 0.84 PfGW456L13_153 GTP-binding protein HflX low > 87
Pseudomonas putida KT2440 0.82 PP_0359 serine/threonine protein kinase 0.86 PP_4893 GTPase HflX low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.80 Psyr_4697 Aminoglycoside phosphotransferase 0.82 Psyr_0573 GTP-binding protein HflX low > 86
Pseudomonas syringae pv. syringae B728a 0.80 Psyr_4697 Aminoglycoside phosphotransferase 0.82 Psyr_0573 GTP-binding protein HflX low > 86
Kangiella aquimarina DSM 16071 0.58 B158DRAFT_1377 Putative homoserine kinase type II (protein kinase fold) 0.57 B158DRAFT_1953 GTP-binding protein HflX low > 40
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS07220 serine/threonine protein kinase 0.49 HSERO_RS14770 GTP-binding protein HflX low > 78
Dechlorosoma suillum PS 0.53 Dsui_2766 putative homoserine kinase type II (protein kinase fold) 0.48 Dsui_3136 GTP-binding protein HflX low > 51
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS02875 serine/threonine protein kinase 0.40 RR42_RS13110 GTP-binding protein low > 128
Ralstonia sp. UNC404CL21Col 0.52 ABZR87_RS07855 serine/threonine protein kinase 0.39 ABZR87_RS10945 GTPase HflX low > 80
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS00430 serine/threonine protein kinase 0.43 QEN71_RS06005 GTPase HflX low > 153
Marinobacter adhaerens HP15 0.52 HP15_2490 kinase 0.62 HP15_2498 small GTP-binding protein low > 73
Ralstonia solanacearum UW163 0.52 UW163_RS01710 serine/threonine protein kinase 0.39 UW163_RS12770 GTPase HflX — —
Ralstonia solanacearum IBSBF1503 0.52 RALBFv3_RS11880 serine/threonine protein kinase 0.39 RALBFv3_RS15305 GTPase HflX — —
Ralstonia solanacearum PSI07 0.51 RPSI07_RS21320 serine/threonine protein kinase 0.39 RPSI07_RS18070 GTPase HflX low > 81
Ralstonia solanacearum GMI1000 0.51 RS_RS02700 serine/threonine protein kinase 0.39 RS_RS06115 GTPase HflX low > 80
Variovorax sp. SCN45 0.51 GFF3567 YihE protein, required for LPS synthesis 0.35 GFF1001 Ribosome LSU-associated GTP-binding protein HflX low > 127
Shewanella loihica PV-4 0.50 Shew_0264 serine/threonine protein kinase (RefSeq) 0.59 Shew_0567 GTP-binding protein, HSR1-related (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.50 MIT1002_00718 serine/threonine protein kinase 0.59 MIT1002_03787 GTP-binding protein HflX low > 70
Shewanella oneidensis MR-1 0.49 SO0332 hypothetical kinase (NCBI ptt file) 0.58 SO0604 hflX GTP-binding protein HflX (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.49 Shewana3_3839 serine/threonine protein kinase (RefSeq) 0.58 Shewana3_0598 GTP-binding protein, HSR1-related (RefSeq) — —
Variovorax sp. OAS795 0.49 ABID97_RS00940 serine/threonine protein kinase 0.34 ABID97_RS14255 GTPase HflX low > 91
Vibrio cholerae E7946 ATCC 55056 0.48 CSW01_00175 serine/threonine protein kinase 0.57 CSW01_01840 GTPase HflX low > 62
Rahnella sp. WP5 0.47 EX31_RS15915 serine/threonine protein kinase 0.52 EX31_RS08815 GTPase HflX low > 89
Shewanella amazonensis SB2B 0.46 Sama_3322 serine/threonine protein kinase (RefSeq) 0.60 Sama_3024 GTP-binding protein HflX (RefSeq) low > 62
Serratia liquefaciens MT49 0.46 IAI46_25000 serine/threonine protein kinase 0.57 IAI46_01630 GTPase HflX 0.46 71
Pectobacterium carotovorum WPP14 0.45 HER17_RS21480 serine/threonine protein kinase 0.57 HER17_RS02590 GTPase HflX 0.68 31
Dickeya dadantii 3937 0.45 DDA3937_RS00095 serine/threonine protein kinase 0.57 DDA3937_RS18605 GTPase HflX low > 74
Escherichia fergusonii Becca 0.44 EFB2_04758 Stress response kinase A 0.58 EFB2_04362 GTPase HflX low > 86
Escherichia coli ECRC101 0.44 OKFHMN_14175 srkA stress response kinase SrkA 0.58 OKFHMN_12250 hflX GTPase HflX — —
Escherichia coli ECRC102 0.44 NIAGMN_11930 srkA stress response kinase SrkA 0.58 NIAGMN_10100 hflX GTPase HflX — —
Escherichia coli ECRC98 0.44 JDDGAC_17800 srkA stress response kinase SrkA 0.58 JDDGAC_15890 hflX GTPase HflX — —
Escherichia coli ECOR27 0.44 NOLOHH_06305 srkA stress response kinase SrkA 0.58 NOLOHH_04515 hflX GTPase HflX low > 57
Escherichia coli BL21 0.44 ECD_03745 Cpx stress response Thr/Ser protein kinase; MazF antagonist protein 0.58 ECD_04040 GTPase, stimulated by 50S subunit binding; Mn(2+) homeostasis regulator low > 60
Escherichia coli BW25113 0.44 b3859 yihE predicted kinase (NCBI) 0.58 b4173 hflX predicted GTPase (NCBI) low > 76
Escherichia coli ECRC99 0.44 KEDOAH_13975 srkA stress response kinase SrkA 0.58 KEDOAH_15905 hflX GTPase HflX — —
Escherichia coli ECRC62 0.44 BNILDI_05225 srkA stress response kinase SrkA 0.58 BNILDI_06975 hflX GTPase HflX — —
Escherichia coli Nissle 1917 0.44 ECOLIN_RS22245 stress response kinase SrkA 0.58 ECOLIN_RS24235 ribosome rescue GTPase HflX low > 52
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_04194 Stress response kinase A 0.58 OHPLBJKB_03869 GTPase HflX low > 73
Escherichia coli ECRC101 0.44 MCAODC_04675 srkA stress response kinase SrkA 0.58 MCAODC_02765 hflX GTPase HflX — —
Dickeya dianthicola ME23 0.44 DZA65_RS22245 serine/threonine protein kinase 0.57 DZA65_RS19675 GTPase HflX low > 75
Enterobacter sp. TBS_079 0.44 MPMX20_04604 Stress response kinase A 0.58 MPMX20_00454 GTPase HflX low > 85
Escherichia coli ECOR38 0.44 HEPCGN_12810 srkA stress response kinase SrkA 0.58 HEPCGN_10480 hflX GTPase HflX low > 85
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_16730 srkA serine/threonine protein kinase 0.50 OKGIIK_06635 hflX GTPase HflX low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF2212 YihE protein, a ser/thr kinase implicated in LPS synthesis and Cpx signalling 0.58 GFF826 GTP-binding protein HflX low > 78
Pantoea sp. MT58 0.44 IAI47_00420 serine/threonine protein kinase 0.58 IAI47_02595 GTPase HflX low > 76
Dickeya dianthicola 67-19 0.44 HGI48_RS21270 serine/threonine protein kinase 0.57 HGI48_RS18540 GTPase HflX low > 71
Enterobacter asburiae PDN3 0.44 EX28DRAFT_4340 Putative homoserine kinase type II (protein kinase fold) 0.58 EX28DRAFT_3370 GTP-binding protein HflX low > 76
Rhodanobacter denitrificans FW104-10B01 0.43 LRK54_RS06900 serine/threonine protein kinase 0.51 LRK54_RS00625 GTPase HflX low > 59
Rhodanobacter denitrificans MT42 0.43 LRK55_RS06645 serine/threonine protein kinase 0.51 LRK55_RS00395 GTPase HflX low > 63
Dyella japonica UNC79MFTsu3.2 0.43 ABZR86_RS16915 serine/threonine protein kinase 0.50 ABZR86_RS08360 ribosome rescue GTPase HflX low > 74
Klebsiella michiganensis M5al 0.43 BWI76_RS00340 stress response kinase A 0.59 BWI76_RS02540 GTPase HflX low > 92
Erwinia tracheiphila SCR3 0.39 LU632_RS23880 serine/threonine protein kinase 0.56 LU632_RS02060 hflX GTPase HflX low > 74
Rhodospirillum rubrum S1H 0.09 Rru_A3016 Aminoglycoside phosphotransferase (NCBI) 0.31 Rru_A1685 Small GTP-binding protein domain (NCBI) low > 58

Not shown: 5 genomes with orthologs for Psest_0409 only; 17 genomes with orthologs for Psest_0684 only