Conservation of cofitness between PS417_04270 and PS417_27305 in Pseudomonas simiae WCS417

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_04270 ribonuclease G 1.0 PS417_27305 5-formyltetrahydrofolate cyclo-ligase 0.41 17
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS04325 ribonuclease G 0.93 PFLU_RS28965 5-formyltetrahydrofolate cyclo-ligase 0.48 11
Pseudomonas fluorescens SBW25 1.00 PFLU_RS04325 ribonuclease G 0.93 PFLU_RS28965 5-formyltetrahydrofolate cyclo-ligase 0.68 12
Pseudomonas fluorescens GW456-L13 0.99 PfGW456L13_5029 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.81 PfGW456L13_892 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.33 35
Pseudomonas fluorescens FW300-N1B4 0.98 Pf1N1B4_1095 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.81 Pf1N1B4_2225 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) low > 87
Pseudomonas fluorescens FW300-N2E3 0.96 AO353_05230 ribonuclease G 0.82 AO353_08780 5-formyltetrahydrofolate cyclo-ligase low > 101
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_07110 ribonuclease G 0.73 AO356_12990 5-formyltetrahydrofolate cyclo-ligase low > 104
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_3283 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.73 Pf6N2E2_4476 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) low > 103
Pseudomonas sp. RS175 0.95 PFR28_00158 Ribonuclease G 0.75 PFR28_04325 5-formyltetrahydrofolate cyclo-ligase low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.94 Psyr_4159 RNAse G 0.74 Psyr_0317 5-formyltetrahydrofolate cyclo-ligase low > 86
Pseudomonas syringae pv. syringae B728a 0.94 Psyr_4159 RNAse G 0.74 Psyr_0317 5-formyltetrahydrofolate cyclo-ligase low > 86
Pseudomonas putida KT2440 0.92 PP_0937 endoribonuclease G (RNAse G) 0.67 PP_5203 5-formyltetrahydrofolate cyclo-ligase low > 96
Pseudomonas sp. S08-1 0.91 OH686_08595 Ribonuclease G 0.57 OH686_11225 5-formyltetrahydrofolate cyclo-ligase low > 80
Pseudomonas stutzeri RCH2 0.90 Psest_3323 ribonuclease, Rne/Rng family 0.64 Psest_0170 5,10-methenyltetrahydrofolate synthetase low > 67
Marinobacter adhaerens HP15 0.69 HP15_2451 ribonuclease, Rne/Rng family 0.38 HP15_3211 5-formyltetrahydrofolate cyclo-ligase low > 73
Kangiella aquimarina DSM 16071 0.65 B158DRAFT_2069 ribonuclease, Rne/Rng family 0.26 B158DRAFT_0528 5-formyltetrahydrofolate cyclo-ligase low > 40
Rhodanobacter sp. FW510-T8 0.61 OKGIIK_10290 rng ribonuclease G 0.27 OKGIIK_12225 5-formyltetrahydrofolate cyclo-ligase low > 52
Xanthomonas campestris pv. campestris strain 8004 0.59 Xcc-8004.1880.1 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.22 Xcc-8004.1138.1 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.57 10
Lysobacter sp. OAE881 0.59 ABIE51_RS06785 ribonuclease G 0.22 ABIE51_RS17355 5-formyltetrahydrofolate cyclo-ligase low > 62
Paraburkholderia sabiae LMG 24235 0.59 QEN71_RS24430 ribonuclease G 0.14 QEN71_RS28640 5-formyltetrahydrofolate cyclo-ligase low > 153
Dechlorosoma suillum PS 0.59 Dsui_0434 ribonuclease, Rne/Rng family 0.14 Dsui_0682 5,10-methenyltetrahydrofolate synthetase — —
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS21730 ribonuclease G 0.23 ABZR86_RS11995 5-formyltetrahydrofolate cyclo-ligase low > 74
Vibrio cholerae E7946 ATCC 55056 0.58 CSW01_02205 ribonuclease E/G 0.32 CSW01_12545 5-formyltetrahydrofolate cyclo-ligase low > 62
Rhodanobacter denitrificans MT42 0.58 LRK55_RS03155 ribonuclease G 0.26 LRK55_RS11395 5-formyltetrahydrofolate cyclo-ligase low > 63
Rhodanobacter denitrificans FW104-10B01 0.58 LRK54_RS03405 ribonuclease G 0.26 LRK54_RS11670 5-formyltetrahydrofolate cyclo-ligase low > 59
Dickeya dadantii 3937 0.57 DDA3937_RS01450 ribonuclease G 0.31 DDA3937_RS02410 5-formyltetrahydrofolate cyclo-ligase low > 74
Dickeya dianthicola ME23 0.57 DZA65_RS01430 ribonuclease G 0.32 DZA65_RS02475 5-formyltetrahydrofolate cyclo-ligase low > 75
Dickeya dianthicola 67-19 0.57 HGI48_RS01370 ribonuclease G 0.30 HGI48_RS02370 5-formyltetrahydrofolate cyclo-ligase low > 71
Klebsiella michiganensis M5al 0.57 BWI76_RS25480 ribonuclease E/G 0.30 BWI76_RS23915 5-formyltetrahydrofolate cyclo-ligase low > 92
Shewanella sp. ANA-3 0.57 Shewana3_3644 ribonuclease G (RefSeq) 0.32 Shewana3_3506 5-formyltetrahydrofolate cyclo-ligase (RefSeq) low > 73
Escherichia coli ECRC62 0.57 BNILDI_01990 rng ribonuclease G 0.34 BNILDI_09930 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia coli ECRC98 0.57 JDDGAC_21370 rng ribonuclease G 0.34 JDDGAC_23125 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF2138 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.30 GFF3012 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) low > 78
Escherichia coli Nissle 1917 0.57 ECOLIN_RS18605 ribonuclease G 0.33 ECOLIN_RS16205 5-formyltetrahydrofolate cyclo-ligase low > 52
Escherichia coli BW25113 0.57 b3247 cafA bundles of cytoplasmic filaments (VIMSS) 0.31 b2912 ygfA putative ligase (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_00458 Ribonuclease G 0.31 OHPLBJKB_00804 5-formyltetrahydrofolate cyclo-ligase low > 73
Escherichia coli ECRC101 0.57 MCAODC_08265 rng ribonuclease G 0.34 MCAODC_10005 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia fergusonii Becca 0.57 EFB2_00584 Ribonuclease G 0.34 EFB2_00991 5-formyltetrahydrofolate cyclo-ligase low > 86
Escherichia coli ECRC99 0.57 KEDOAH_10405 rng ribonuclease G 0.34 KEDOAH_08655 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia coli ECOR27 0.57 NOLOHH_09530 rng ribonuclease G 0.34 NOLOHH_11395 ygfA 5-formyltetrahydrofolate cyclo-ligase low > 57
Escherichia coli ECRC101 0.57 OKFHMN_17745 rng ribonuclease G 0.34 OKFHMN_19485 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia coli ECOR38 0.57 HEPCGN_16610 rng ribonuclease G 0.34 HEPCGN_18775 ygfA 5-formyltetrahydrofolate cyclo-ligase low > 85
Escherichia coli BL21 0.57 ECD_03106 ribonuclease G 0.31 ECD_02743 5-formyltetrahydrofolate cyclo-ligase family protein low > 60
Escherichia coli ECRC102 0.57 NIAGMN_15505 rng ribonuclease G 0.34 NIAGMN_17250 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Enterobacter sp. TBS_079 0.57 MPMX20_04153 Ribonuclease G 0.32 MPMX20_03770 5-formyltetrahydrofolate cyclo-ligase low > 85
Rahnella sp. WP5 0.57 EX31_RS12255 ribonuclease G 0.33 EX31_RS21480 5-formyltetrahydrofolate cyclo-ligase low > 89
Acinetobacter radioresistens SK82 0.57 MPMX26_00646 Ribonuclease G 0.22 MPMX26_02298 5-formyltetrahydrofolate cyclo-ligase low > 36
Shewanella oneidensis MR-1 0.57 SO4094 cafA ribonuclease G (NCBI ptt file) 0.32 SO0774 5-formyltetrahydrofolate cyclo-ligase family protein (NCBI ptt file) low > 76
Enterobacter asburiae PDN3 0.57 EX28DRAFT_3297 ribonuclease, Rne/Rng family 0.29 EX28DRAFT_2964 5,10-methenyltetrahydrofolate synthetase low > 76
Pectobacterium carotovorum WPP14 0.57 HER17_RS20150 ribonuclease G 0.36 HER17_RS19095 5-formyltetrahydrofolate cyclo-ligase low > 75
Serratia liquefaciens MT49 0.57 IAI46_22700 ribonuclease G 0.34 IAI46_20895 5-formyltetrahydrofolate cyclo-ligase low > 86
Shewanella loihica PV-4 0.56 Shew_0407 ribonuclease G (RefSeq) 0.33 Shew_3069 5-formyltetrahydrofolate cyclo-ligase (RefSeq) low > 60
Erwinia tracheiphila SCR3 0.56 LU632_RS21430 rng ribonuclease G 0.30 LU632_RS05860 5-formyltetrahydrofolate cyclo-ligase — —
Shewanella amazonensis SB2B 0.55 Sama_0471 ribonuclease G (RefSeq) 0.29 Sama_2726 5-formyltetrahydrofolate cyclo-ligase family protein (RefSeq) low > 62
Pantoea sp. MT58 0.55 IAI47_02455 ribonuclease G 0.31 IAI47_03730 5-formyltetrahydrofolate cyclo-ligase low > 76
Cupriavidus basilensis FW507-4G11 0.55 RR42_RS04700 ribonuclease G 0.13 RR42_RS01400 5-formyltetrahydrofolate cyclo-ligase low > 128
Ralstonia solanacearum GMI1000 0.55 RS_RS11025 ribonuclease G 0.16 RS_RS00450 5-formyltetrahydrofolate cyclo-ligase — —
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS15440 ribonuclease G 0.19 ABZR87_RS04880 5-formyltetrahydrofolate cyclo-ligase low > 80
Ralstonia solanacearum PSI07 0.55 RPSI07_RS13650 ribonuclease G 0.17 RPSI07_RS23505 5-formyltetrahydrofolate cyclo-ligase — —
Ralstonia solanacearum IBSBF1503 0.55 RALBFv3_RS03575 ribonuclease G 0.17 RALBFv3_RS09865 5-formyltetrahydrofolate cyclo-ligase — —
Ralstonia solanacearum UW163 0.55 UW163_RS10095 ribonuclease G 0.17 UW163_RS03715 5-formyltetrahydrofolate cyclo-ligase — —

Not shown: 12 genomes with orthologs for PS417_04270 only; 8 genomes with orthologs for PS417_27305 only