Conservation of cofitness between GFF149 and GFF5239 in Hydrogenophaga sp. GW460-11-11-14-LB1

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF149 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 1.0 GFF5239 Chorismate synthase (EC 4.2.3.5) 0.43 18
Variovorax sp. OAS795 0.77 ABID97_RS07235 phosphoglycerate dehydrogenase 0.79 ABID97_RS19805 chorismate synthase — —
Acidovorax sp. GW101-3H11 0.76 Ac3H11_4790 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.83 Ac3H11_2925 Chorismate synthase (EC 4.2.3.5) low > 79
Pseudomonas fluorescens FW300-N2E3 0.75 AO353_08510 3-phosphoglycerate dehydrogenase 0.58 AO353_02250 chorismate synthase low > 101
Pseudomonas fluorescens FW300-N2C3 0.75 AO356_10300 3-phosphoglycerate dehydrogenase 0.58 AO356_19540 chorismate synthase — —
Pseudomonas fluorescens FW300-N2E2 0.75 Pf6N2E2_3932 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.58 Pf6N2E2_5822 Chorismate synthase (EC 4.2.3.5) — —
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS28695 phosphoglycerate dehydrogenase 0.58 PFLU_RS21280 chorismate synthase — —
Pseudomonas sp. RS175 0.75 PFR28_04842 D-3-phosphoglycerate dehydrogenase 0.57 PFR28_03126 Chorismate synthase — —
Pseudomonas fluorescens SBW25 0.75 PFLU_RS28695 phosphoglycerate dehydrogenase 0.58 PFLU_RS21280 chorismate synthase — —
Pseudomonas simiae WCS417 0.75 PS417_27040 3-phosphoglycerate dehydrogenase 0.58 PS417_19315 chorismate synthase — —
Pseudomonas fluorescens FW300-N1B4 0.74 Pf1N1B4_2272 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.58 Pf1N1B4_3780 Chorismate synthase (EC 4.2.3.5) — —
Pseudomonas sp. S08-1 0.74 OH686_11280 D-3-phosphoglycerate dehydrogenase 0.59 OH686_00675 chorismate synthase — —
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_4852 D-3-phosphoglycerate dehydrogenase 0.57 Psyr_1853 chorismate synthase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_4852 D-3-phosphoglycerate dehydrogenase 0.57 Psyr_1853 chorismate synthase — —
Pseudomonas fluorescens GW456-L13 0.74 PfGW456L13_943 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.59 PfGW456L13_4165 Chorismate synthase (EC 4.2.3.5) 0.66 63
Variovorax sp. SCN45 0.74 GFF2538 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.80 GFF2627 Chorismate synthase (EC 4.2.3.5) low > 127
Pseudomonas putida KT2440 0.73 PP_5155 D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase 0.59 PP_1830 Chorismate synthase — —
Pseudomonas stutzeri RCH2 0.73 Psest_3873 Phosphoglycerate dehydrogenase and related dehydrogenases 0.60 Psest_1903 chorismate synthase — —
Marinobacter adhaerens HP15 0.68 HP15_2554 D-3-phosphoglycerate dehydrogenase-like protein 0.64 HP15_1838 chorismate synthase — —
Shewanella sp. ANA-3 0.65 Shewana3_3416 D-3-phosphoglycerate dehydrogenase (RefSeq) 0.58 Shewana3_1469 chorismate synthase (RefSeq) 0.84 49
Shewanella amazonensis SB2B 0.64 Sama_2949 D-3-phosphoglycerate dehydrogenase (RefSeq) 0.61 Sama_2159 chorismate synthase (RefSeq) — —
Rhodanobacter denitrificans MT42 0.64 LRK55_RS02935 phosphoglycerate dehydrogenase 0.63 LRK55_RS01505 chorismate synthase low > 63
Rhodanobacter sp. FW510-T8 0.64 OKGIIK_10055 serA phosphoglycerate dehydrogenase 0.64 OKGIIK_04805 aroC chorismate synthase low > 52
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS03185 phosphoglycerate dehydrogenase 0.63 LRK54_RS01725 chorismate synthase — —
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS09635 phosphoglycerate dehydrogenase 0.66 ABZR86_RS08040 chorismate synthase 0.90 54
Kangiella aquimarina DSM 16071 0.63 B158DRAFT_0518 Phosphoglycerate dehydrogenase and related dehydrogenases 0.46 B158DRAFT_2433 chorismate synthase (EC 4.2.3.5) low > 40
Shewanella loihica PV-4 0.63 Shew_3196 D-3-phosphoglycerate dehydrogenase (RefSeq) 0.60 Shew_2416 chorismate synthase (RefSeq) low > 60
Acinetobacter radioresistens SK82 0.63 MPMX26_02773 D-3-phosphoglycerate dehydrogenase 0.57 MPMX26_01340 Chorismate synthase — —
Alteromonas macleodii MIT1002 0.62 MIT1002_02993 D-3-phosphoglycerate dehydrogenase 0.62 MIT1002_01229 Chorismate synthase — —
Dickeya dianthicola ME23 0.62 DZA65_RS19540 phosphoglycerate dehydrogenase 0.58 DZA65_RS15465 chorismate synthase — —
Dickeya dianthicola 67-19 0.62 HGI48_RS18400 phosphoglycerate dehydrogenase 0.58 HGI48_RS14530 chorismate synthase — —
Xanthomonas campestris pv. campestris strain 8004 0.62 Xcc-8004.2931.1 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.63 Xcc-8004.1955.1 Chorismate synthase (EC 4.2.3.5) 0.81 20
Enterobacter sp. TBS_079 0.62 MPMX20_03771 D-3-phosphoglycerate dehydrogenase 0.58 MPMX20_03264 Chorismate synthase 0.85 32
Dickeya dadantii 3937 0.62 DDA3937_RS18480 phosphoglycerate dehydrogenase 0.58 DDA3937_RS14580 chorismate synthase — —
Enterobacter asburiae PDN3 0.61 EX28DRAFT_2965 Phosphoglycerate dehydrogenase and related dehydrogenases 0.58 EX28DRAFT_0275 chorismate synthase (EC 4.2.3.5) — —
Erwinia tracheiphila SCR3 0.61 LU632_RS05855 serA phosphoglycerate dehydrogenase 0.61 LU632_RS07775 aroC chorismate synthase low > 74
Klebsiella michiganensis M5al 0.61 BWI76_RS23920 D-3-phosphoglycerate dehydrogenase 0.58 BWI76_RS20435 chorismate synthase 0.73 58
Pectobacterium carotovorum WPP14 0.61 HER17_RS02725 phosphoglycerate dehydrogenase 0.60 HER17_RS06935 chorismate synthase 0.92 11
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_12555 phosphoglycerate dehydrogenase 0.62 CSW01_10560 chorismate synthase low > 62
Serratia liquefaciens MT49 0.61 IAI46_20900 phosphoglycerate dehydrogenase 0.59 IAI46_18025 chorismate synthase 0.73 37
Pantoea sp. MT58 0.60 IAI47_03725 phosphoglycerate dehydrogenase 0.58 IAI47_06150 chorismate synthase — —
Rahnella sp. WP5 0.60 EX31_RS21470 phosphoglycerate dehydrogenase 0.58 EX31_RS19685 chorismate synthase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.60 GFF3013 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.59 GFF1950 Chorismate synthase (EC 4.2.3.5) low > 78
Lysobacter sp. OAE881 0.60 ABIE51_RS13245 phosphoglycerate dehydrogenase 0.61 ABIE51_RS08220 chorismate synthase — —
Escherichia coli BL21 0.60 ECD_02744 D-3-phosphoglycerate dehydrogenase 0.58 ECD_02254 chorismate synthase low > 60
Escherichia coli ECRC101 0.60 MCAODC_09980 serA phosphoglycerate dehydrogenase 0.58 MCAODC_13655 aroC chorismate synthase — —
Escherichia coli ECRC99 0.60 KEDOAH_08680 serA phosphoglycerate dehydrogenase 0.58 KEDOAH_05580 aroC chorismate synthase — —
Escherichia coli ECRC101 0.60 OKFHMN_19460 serA phosphoglycerate dehydrogenase 0.58 OKFHMN_22615 aroC chorismate synthase — —
Escherichia coli ECOR27 0.60 NOLOHH_11370 serA phosphoglycerate dehydrogenase 0.58 NOLOHH_14250 aroC chorismate synthase — —
Escherichia coli BW25113 0.60 b2913 serA D-3-phosphoglycerate dehydrogenase (NCBI) 0.58 b2329 aroC chorismate synthase (NCBI) 0.91 8
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_00803 D-3-phosphoglycerate dehydrogenase 0.58 OHPLBJKB_01376 Chorismate synthase low > 73
Escherichia coli ECRC98 0.60 JDDGAC_23100 serA phosphoglycerate dehydrogenase 0.58 JDDGAC_26575 aroC chorismate synthase — —
Escherichia coli Nissle 1917 0.60 ECOLIN_RS16210 phosphoglycerate dehydrogenase 0.58 ECOLIN_RS13490 chorismate synthase — —
Escherichia coli ECRC102 0.60 NIAGMN_17225 serA phosphoglycerate dehydrogenase 0.58 NIAGMN_20390 aroC chorismate synthase — —
Escherichia coli ECOR38 0.60 HEPCGN_18760 serA phosphoglycerate dehydrogenase 0.58 HEPCGN_21820 aroC chorismate synthase low > 85
Escherichia coli ECRC62 0.59 BNILDI_09905 serA phosphoglycerate dehydrogenase 0.58 BNILDI_13170 aroC chorismate synthase — —
Escherichia fergusonii Becca 0.59 EFB2_00990 D-3-phosphoglycerate dehydrogenase 0.58 EFB2_01529 Chorismate synthase low > 86
Azospirillum brasilense Sp245 0.56 AZOBR_RS10940 3-phosphoglycerate dehydrogenase 0.57 AZOBR_RS10730 chorismate synthase — —
Azospirillum sp. SherDot2 0.56 MPMX19_00753 D-3-phosphoglycerate dehydrogenase 0.55 MPMX19_01810 Chorismate synthase — —
Rhodospirillum rubrum S1H 0.56 Rru_A2456 Phosphoglycerate dehydrogenase (NCBI) 0.58 Rru_A2623 Chorismate synthase (NCBI) — —
Rhizobium sp. OAE497 0.53 ABIE40_RS30040 phosphoglycerate dehydrogenase 0.48 ABIE40_RS03980 chorismate synthase — —
Bosea sp. OAE506 0.52 ABIE41_RS08410 phosphoglycerate dehydrogenase 0.52 ABIE41_RS10190 chorismate synthase — —
Castellaniella sp019104865 MT123 0.50 ABCV34_RS15150 phosphoglycerate dehydrogenase 0.72 ABCV34_RS04300 chorismate synthase — —
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS27010 D-3-phosphoglycerate dehydrogenase 0.75 RR42_RS06485 chorismate synthase low > 128
Bifidobacterium breve UCC2003 0.46 BBR_RS16970 phosphoglycerate dehydrogenase 0.21 BBR_RS15080 chorismate synthase low > 34

Not shown: 1 genomes with orthologs for GFF149 only; 38 genomes with orthologs for GFF5239 only