Conservation of cofitness between GFF5087 and GFF5056 in Sphingobium sp. HT1-2

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF5087 Zinc-type alcohol dehydrogenase-like protein 1.0 GFF5056 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.86 3
Acinetobacter baumannii LAC-4 0.62 RR41_RS16800 zinc-binding alcohol dehydrogenase family protein 0.21 RR41_RS00155 phosphoenolpyruvate carboxylase low > 55
Hydrogenophaga sp. GW460-11-11-14-LB1 0.60 GFF2160 Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) (EC 1.1.1.-); Similar to arginate lyase 0.37 GFF115 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) — —
Acinetobacter radioresistens SK82 0.58 MPMX26_00857 Zinc-type alcohol dehydrogenase-like protein 0.21 MPMX26_03013 Phosphoenolpyruvate carboxylase low > 36
Pseudomonas segetis P6 0.58 MPMX49_01119 Zinc-type alcohol dehydrogenase-like protein 0.21 MPMX49_01618 Phosphoenolpyruvate carboxylase low > 75
Acidovorax sp. GW101-3H11 0.57 Ac3H11_4512 Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) (EC 1.1.1.-); Similar to arginate lyase 0.38 Ac3H11_3553 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) low > 79
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS05920 zinc-binding alcohol dehydrogenase family protein 0.40 ABZR87_RS16140 phosphoenolpyruvate carboxylase low > 80
Pseudomonas putida KT2440 0.56 PP_2953 Alcohol dehydrogenase, zinc-containing 0.22 PP_1505 Phosphoenolpyruvate carboxylase low > 96
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_26600 NADPH:quinone reductase 0.22 AO356_06185 phosphoenolpyruvate carboxylase low > 104
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_1257 Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) (EC 1.1.1.-); Similar to arginate lyase 0.22 Pf1N1B4_3051 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_0658 Zinc-containing alcohol dehydrogenase superfamily 0.22 Psyr_1318 Phosphoenolpyruvate carboxylase low > 86
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_06135 NADPH:quinone reductase 0.22 AO353_16310 phosphoenolpyruvate carboxylase low > 101
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_0658 Zinc-containing alcohol dehydrogenase superfamily 0.22 Psyr_1318 Phosphoenolpyruvate carboxylase low > 86
Pseudomonas sp. SVBP6 0.55 COO64_RS26360 zinc-binding alcohol dehydrogenase family protein 0.23 COO64_RS19495 ppc phosphoenolpyruvate carboxylase low > 93
Azospirillum sp. SherDot2 0.55 MPMX19_00223 Zinc-type alcohol dehydrogenase-like protein 0.41 MPMX19_06050 Phosphoenolpyruvate carboxylase low > 112
Pseudomonas sp. DMC3 0.55 GFF3361 Zinc-type alcohol dehydrogenase-like protein 0.22 GFF2023 Phosphoenolpyruvate carboxylase low > 89
Pseudomonas sp. S08-1 0.55 OH686_07350 Zinc-type alcohol dehydrogenase-like protein 0.20 OH686_06795 Phosphoenolpyruvate carboxylase low > 80
Pseudomonas aeruginosa PA14 0.55 IKLFDK_18210 zinc-binding alcohol dehydrogenase family protein 0.22 IKLFDK_18825 phosphoenolpyruvate carboxylase low > 98
Pseudomonas aeruginosa PUPa3 0.55 DQ20_RS41985 zinc-binding alcohol dehydrogenase family protein 0.22 DQ20_RS42585 ppc;go_function=phosphoenolpyruvate phosphoenolpyruvate carboxylase low > 101
Rhodopseudomonas palustris CGA009 0.55 TX73_016670 zinc-binding alcohol dehydrogenase family protein 0.40 TX73_009115 phosphoenolpyruvate carboxylase low > 86
Pseudomonas aeruginosa MRSN321 0.55 DY961_RS15170 zinc-binding alcohol dehydrogenase family protein 0.22 DY961_RS14540 ppc;go_function=phosphoenolpyruvate phosphoenolpyruvate carboxylase low > 100
Pseudomonas sp. RS175 0.55 PFR28_05249 Zinc-type alcohol dehydrogenase-like protein 0.21 PFR28_00368 Phosphoenolpyruvate carboxylase low > 88
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS27480 NADPH:quinone reductase 0.40 BPHYT_RS05225 phosphoenolpyruvate carboxylase — —
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_3482 Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) (EC 1.1.1.-); Similar to arginate lyase 0.22 Pf6N2E2_3103 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) low > 103
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_19 Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) (EC 1.1.1.-); Similar to arginate lyase 0.22 PfGW456L13_4740 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) low > 87
Variovorax sp. SCN45 0.54 GFF6904 Zinc-type alcohol dehydrogenase-like protein 0.38 GFF3838 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) low > 127
Herbaspirillum seropedicae SmR1 0.54 HSERO_RS05430 NADPH:quinone reductase 0.38 HSERO_RS14670 phosphoenolpyruvate carboxylase low > 78
Pseudomonas sp. BP01 0.54 JOY50_RS03260 zinc-binding alcohol dehydrogenase family protein 0.22 JOY50_RS26030 ppc phosphoenolpyruvate carboxylase — —
Xanthomonas campestris pv. campestris strain 8004 0.54 Xcc-8004.5377.1 DNA recombination protein RmuC 0.24 Xcc-8004.4314.1 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) low > 74
Pseudomonas simiae WCS417 0.53 PS417_03185 NADPH:quinone reductase 0.22 PS417_06060 phosphoenolpyruvate carboxylase low > 88
Klebsiella pneumoniae MKP103 0.53 KDGMDA_08245 zinc-binding alcohol dehydrogenase family protein 0.21 KDGMDA_09355 phosphoenolpyruvate carboxylase low > 95
Pseudomonas orientalis W4I3 0.53 QF045_RS06220 zinc-binding alcohol dehydrogenase family protein 0.22 QF045_RS08910 phosphoenolpyruvate carboxylase low > 93
Pseudomonas fluorescens SBW25 0.53 PFLU_RS03265 zinc-binding alcohol dehydrogenase family protein 0.22 PFLU_RS06130 phosphoenolpyruvate carboxylase low > 109
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS03265 zinc-binding alcohol dehydrogenase family protein 0.22 PFLU_RS06130 phosphoenolpyruvate carboxylase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.53 H281DRAFT_01721 zinc-binding alcohol dehydrogenase family protein 0.41 H281DRAFT_00197 Phosphoenolpyruvate carboxylase, type 1 low > 103
Pseudomonas lactucae CFBP13502 0.53 GEMAOFIL_00852 Zinc-type alcohol dehydrogenase-like protein 0.22 GEMAOFIL_01382 Phosphoenolpyruvate carboxylase low > 96
Pseudomonas stutzeri RCH2 0.53 Psest_3828 zinc-binding alcohol dehydrogenase family protein 0.22 Psest_1557 Phosphoenolpyruvate carboxylase 0.15 30
Alteromonas macleodii MIT1002 0.52 MIT1002_02514 Zinc-type alcohol dehydrogenase-like protein 0.20 MIT1002_03491 Phosphoenolpyruvate carboxylase low > 70
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS18125 zinc-binding alcohol dehydrogenase family protein 0.23 ABZR86_RS11555 phosphoenolpyruvate carboxylase low > 74
Shewanella oneidensis MR-1 0.52 SO0401 alcohol dehydrogenase, zinc-containing (NCBI ptt file) 0.21 SO0274 ppc phosphoenolpyruvate carboxylase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.51 Shewana3_0406 alcohol dehydrogenase (RefSeq) 0.22 Shewana3_3906 phosphoenolpyruvate carboxylase (RefSeq) low > 73
Rhodanobacter sp000427505 FW510-R12 0.51 LRK53_RS01755 zinc-binding alcohol dehydrogenase family protein 0.23 LRK53_RS16490 phosphoenolpyruvate carboxylase low > 59
Variovorax sp. OAS795 0.51 ABID97_RS05565 zinc-binding alcohol dehydrogenase family protein 0.37 ABID97_RS08220 phosphoenolpyruvate carboxylase low > 91
Paraburkholderia graminis OAS925 0.51 ABIE53_005668 NADPH2:quinone reductase 0.41 ABIE53_001314 phosphoenolpyruvate carboxylase low > 113
Klebsiella michiganensis M5al 0.51 BWI76_RS27625 NADPH:quinone reductase 0.21 BWI76_RS00835 phosphoenolpyruvate carboxylase low > 92
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS34125 NADPH:quinone reductase 0.39 RR42_RS15905 phosphoenolpyruvate carboxylase low > 128
Rhodanobacter sp. FW510-T8 0.51 OKGIIK_16975 qor zinc-binding alcohol dehydrogenase family protein 0.23 OKGIIK_11820 ppc phosphoenolpyruvate carboxylase low > 53
Rhodanobacter denitrificans MT42 0.50 LRK55_RS06410 zinc-binding alcohol dehydrogenase family protein 0.23 LRK55_RS11810 phosphoenolpyruvate carboxylase low > 63
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS06665 zinc-binding alcohol dehydrogenase family protein 0.23 LRK54_RS12075 phosphoenolpyruvate carboxylase low > 59
Lysobacter sp. OAE881 0.49 ABIE51_RS06075 zinc-binding alcohol dehydrogenase family protein 0.22 ABIE51_RS18965 phosphoenolpyruvate carboxylase low > 62
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS22130 zinc-binding alcohol dehydrogenase family protein 0.39 QEN71_RS24955 phosphoenolpyruvate carboxylase low > 153
Xanthobacter sp. DMC5 0.46 GFF4251 Zinc-type alcohol dehydrogenase-like protein 0.39 GFF2267 Phosphoenolpyruvate carboxylase — —
Rahnella sp. WP5 0.42 EX31_RS04010 zinc-binding alcohol dehydrogenase family protein 0.21 EX31_RS14200 phosphoenolpyruvate carboxylase low > 89
Pantoea agglomerans CFBP13505 P0401 0.42 PagCFBP13505_RS21765 zinc-binding alcohol dehydrogenase family protein 0.21 PagCFBP13505_RS18445 phosphoenolpyruvate carboxylase low > 74
Pantoea sp. MT58 0.42 IAI47_16335 zinc-binding alcohol dehydrogenase family protein 0.21 IAI47_00895 phosphoenolpyruvate carboxylase low > 76
Erwinia amylovora T8 0.41 OLJFJH_01565 zinc-binding alcohol dehydrogenase family protein 0.20 OLJFJH_06110 Phosphoenolpyruvate carboxylase low > 58
Serratia liquefaciens MT49 0.41 IAI46_02955 zinc-binding alcohol dehydrogenase family protein 0.20 IAI46_24525 phosphoenolpyruvate carboxylase low > 87
Enterobacter sp. TBS_079 0.40 MPMX20_00696 Zinc-type alcohol dehydrogenase-like protein 0.21 MPMX20_04524 Phosphoenolpyruvate carboxylase low > 85
Enterobacter asburiae PDN3 0.39 EX28DRAFT_3599 zinc-binding alcohol dehydrogenase family protein 0.21 EX28DRAFT_4418 Phosphoenolpyruvate carboxylase, type 1 (EC 4.1.1.31) low > 76
Dickeya dadantii 3937 0.39 DDA3937_RS18475 zinc-binding alcohol dehydrogenase family protein 0.20 DDA3937_RS20360 phosphoenolpyruvate carboxylase low > 74
Pectobacterium carotovorum WPP14 0.37 HER17_RS02730 zinc-binding alcohol dehydrogenase family protein 0.20 HER17_RS20655 phosphoenolpyruvate carboxylase low > 75

Not shown: 8 genomes with orthologs for GFF5087 only; 38 genomes with orthologs for GFF5056 only