Conservation of cofitness between PS417_26685 and PS417_25835 in Pseudomonas simiae WCS417

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_26685 hypothetical protein 1.0 PS417_25835 hypothetical protein 0.28 7
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS28330 YqgE/AlgH family protein 1.00 PFLU_RS27490 YeaH/YhbH family protein 0.14 88
Pseudomonas fluorescens SBW25 0.98 PFLU_RS28330 YqgE/AlgH family protein 1.00 PFLU_RS27490 YeaH/YhbH family protein low > 109
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_4609 UPF0301 protein YqgE 0.95 Pf6N2E2_4800 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) low > 103
Pseudomonas sp. RS175 0.89 PFR28_04234 hypothetical protein 0.95 PFR28_04069 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.89 AO356_13465 hypothetical protein 0.96 AO356_14310 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) low > 104
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_2350 UPF0301 protein YqgE 0.95 Pf1N1B4_2522 FIG002076: hypothetical protein low > 87
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_1019 UPF0301 protein YqgE 0.95 PfGW456L13_1195 FIG002076: hypothetical protein low > 87
Pseudomonas fluorescens FW300-N2E3 0.83 AO353_08120 hypothetical protein 0.94 AO353_07340 yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 101
Pseudomonas putida KT2440 0.76 PP_4995 putative protein possibly involved in the control of exopolysaccharide production 0.89 PP_0396 conserved protein of unknown function low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.75 Psyr_0485 Protein of unknown function DUF179 0.92 Psyr_4632 Protein of unknown function DUF444 low > 86
Pseudomonas syringae pv. syringae B728a 0.75 Psyr_0485 Protein of unknown function DUF179 0.92 Psyr_4632 Protein of unknown function DUF444 low > 86
Pseudomonas sp. S08-1 0.73 OH686_10925 UPF0301 protein YqgE 0.90 OH686_15015 UPF0229 protein YeaH low > 80
Pseudomonas stutzeri RCH2 0.68 Psest_0294 Putative transcriptional regulator 0.87 Psest_3673 Uncharacterized conserved protein low > 67
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS04220 hypothetical protein 0.53 BPHYT_RS11185 hypothetical protein low > 109
Marinobacter adhaerens HP15 0.47 HP15_3510 transcriptional regulator 0.64 HP15_2934 protein YeaH low > 73
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_04814 putative transcriptional regulator 0.55 H281DRAFT_05233 hypothetical protein low > 103
Paraburkholderia graminis OAS925 0.46 ABIE53_001128 putative transcriptional regulator 0.55 ABIE53_002317 uncharacterized sporulation protein YeaH/YhbH (DUF444 family) low > 113
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS15875 hypothetical protein 0.52 RR42_RS36480 hypothetical protein low > 128
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS25795 YqgE/AlgH family protein 0.53 QEN71_RS07380 YeaH/YhbH family protein low > 153
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS08610 YqgE/AlgH family protein 0.51 ABZR87_RS14215 YeaH/YhbH family protein low > 80
Alteromonas macleodii MIT1002 0.43 MIT1002_03056 hypothetical protein 0.60 MIT1002_01232 hypothetical protein low > 70
Magnetospirillum magneticum AMB-1 0.42 AMB_RS04505 YqgE/AlgH family protein 0.44 AMB_RS10890 hypothetical protein low > 64
Pectobacterium carotovorum WPP14 0.41 HER17_RS02630 YqgE/AlgH family protein 0.58 HER17_RS11155 YeaH/YhbH family protein low > 75
Azospirillum brasilense Sp245 0.41 AZOBR_RS10525 hypothetical protein 0.39 AZOBR_RS12650 hypothetical protein low > 97
Variovorax sp. OAS795 0.41 ABID97_RS24675 YqgE/AlgH family protein 0.46 ABID97_RS10265 YeaH/YhbH family protein low > 91
Azospirillum sp. SherDot2 0.40 MPMX19_01077 hypothetical protein 0.44 MPMX19_02156 hypothetical protein low > 112
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS02315 transcriptional regulator 0.54 HSERO_RS21695 hypothetical protein low > 78
Vibrio cholerae E7946 ATCC 55056 0.40 CSW01_02485 YqgE/AlgH family protein 0.56 CSW01_09385 hypothetical protein low > 62
Dickeya dadantii 3937 0.40 DDA3937_RS18565 YqgE/AlgH family protein 0.55 DDA3937_RS10240 YeaH/YhbH family protein 0.50 5
Variovorax sp. SCN45 0.40 GFF2157 UPF0301 protein YqgE 0.48 GFF2934 FIG002076: hypothetical protein low > 127
Serratia liquefaciens MT49 0.40 IAI46_21395 YqgE/AlgH family protein 0.56 IAI46_14380 YeaH/YhbH family protein low > 86
Shewanella sp. ANA-3 0.40 Shewana3_1200 hypothetical protein (RefSeq) 0.53 Shewana3_1637 hypothetical protein (RefSeq) low > 73
Dickeya dianthicola ME23 0.40 DZA65_RS19635 YqgE/AlgH family protein 0.55 DZA65_RS10725 YeaH/YhbH family protein low > 75
Klebsiella michiganensis M5al 0.40 BWI76_RS24080 DUF179 domain-containing protein 0.56 BWI76_RS11480 hypothetical protein low > 92
Acidovorax sp. GW101-3H11 0.39 Ac3H11_3981 UPF0301 protein YqgE 0.49 Ac3H11_1146 FIG002076: hypothetical protein low > 79
Erwinia tracheiphila SCR3 0.39 LU632_RS05475 YqgE/AlgH family protein 0.55 LU632_RS13015 YeaH/YhbH family protein low > 74
Dickeya dianthicola 67-19 0.39 HGI48_RS18500 YqgE/AlgH family protein 0.55 HGI48_RS10250 YeaH/YhbH family protein low > 71
Rhizobium sp. OAE497 0.39 ABIE40_RS04185 YqgE/AlgH family protein 0.39 ABIE40_RS12545 YeaH/YhbH family protein low > 107
Escherichia coli BW25113 0.39 b2948 yqgE orf, hypothetical protein (VIMSS) 0.56 b1784 yeaH yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 76
Escherichia coli ECOR27 0.39 NOLOHH_11140 yqgE YqgE/AlgH family protein 0.56 NOLOHH_17235 yeaH UPF0229 protein YeaH — —
Escherichia coli ECRC101 0.39 OKFHMN_19270 yqgE YqgE/AlgH family protein 0.56 OKFHMN_26705 yeaH UPF0229 protein YeaH — —
Shewanella amazonensis SB2B 0.39 Sama_2472 putative transcriptional regulator (RefSeq) 0.54 Sama_1922 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) low > 62
Escherichia coli Nissle 1917 0.39 ECOLIN_RS16400 YqgE/AlgH family protein 0.56 ECOLIN_RS09945 YeaH/YhbH family protein low > 52
Escherichia coli ECRC102 0.39 NIAGMN_17035 yqgE YqgE/AlgH family protein 0.56 NIAGMN_01360 yeaH UPF0229 protein YeaH — —
Escherichia coli ECRC101 0.39 MCAODC_09790 yqgE YqgE/AlgH family protein 0.56 MCAODC_18705 yeaH UPF0229 protein YeaH — —
Escherichia coli ECRC62 0.39 BNILDI_09720 yqgE YqgE/AlgH family protein 0.56 BNILDI_16020 yeaH UPF0229 protein YeaH — —
Escherichia coli ECOR38 0.39 HEPCGN_18575 yqgE YqgE/AlgH family protein 0.56 HEPCGN_05095 yeaH UPF0229 protein YeaH low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_00770 hypothetical protein 0.56 OHPLBJKB_01948 hypothetical protein low > 73
Pantoea sp. MT58 0.39 IAI47_03610 YqgE/AlgH family protein 0.57 IAI47_08920 YeaH/YhbH family protein low > 76
Escherichia coli BL21 0.39 ECD_02778 uncharacterized protein 0.56 ECD_01753 UPF0229 family protein — —
Escherichia fergusonii Becca 0.39 EFB2_00954 hypothetical protein 0.56 EFB2_02210 hypothetical protein low > 86
Escherichia coli ECRC98 0.39 JDDGAC_22900 yqgE YqgE/AlgH family protein 0.56 JDDGAC_01280 yeaH UPF0229 protein YeaH — —
Escherichia coli ECRC99 0.39 KEDOAH_08870 algH YqgE/AlgH family protein 0.56 KEDOAH_01405 yeaH UPF0229 protein YeaH — —
Sinorhizobium meliloti 1021 0.38 SMc00019 hypothetical protein 0.40 SMc01266 hypothetical protein low > 103
Shewanella oneidensis MR-1 0.38 SO3346 conserved hypothetical protein (NCBI ptt file) 0.56 SO2883 yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF3050 UPF0301 protein YqgE 0.56 GFF3472 UPF0229 protein YeaH low > 78
Enterobacter asburiae PDN3 0.37 EX28DRAFT_2986 Putative transcriptional regulator 0.57 EX28DRAFT_1777 Uncharacterized conserved protein low > 76
Shewanella loihica PV-4 0.37 Shew_1144 hypothetical protein (RefSeq) 0.56 Shew_1832 hypothetical protein (RefSeq) low > 60
Enterobacter sp. TBS_079 0.37 MPMX20_03806 hypothetical protein 0.57 MPMX20_01839 hypothetical protein low > 85
Phaeobacter inhibens DSM 17395 0.36 PGA1_c03130 Putative transcriptional regulator 0.42 PGA1_c02480 Uncharacterized conserved protein low > 62
Rahnella sp. WP5 0.35 EX31_RS02670 YqgE/AlgH family protein 0.57 EX31_RS06255 YeaH/YhbH family protein low > 89

Not shown: 28 genomes with orthologs for PS417_26685 only; 1 genomes with orthologs for PS417_25835 only