| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 1.0 | GFF774 | | cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases | 1.0 | GFF4665 | | Putative deoxyribonuclease YcfH | 0.52 | 17 |
| Acidovorax sp. GW101-3H11 | 0.78 | Ac3H11_1699 | | cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases | 0.71 | Ac3H11_2488 | | Putative deoxyribonuclease YcfH | low | > 79 |
| Variovorax sp. SCN45 | 0.77 | GFF6037 | | Transcriptional regulator, Crp/Fnr family | 0.70 | GFF34 | | Uncharacterized metal-dependent hydrolase YcfH | low | > 127 |
| Variovorax sp. OAS795 | 0.76 | ABID97_RS07820 | | Crp/Fnr family transcriptional regulator | 0.71 | ABID97_RS16000 | | TatD family hydrolase | low | > 91 |
| Dechlorosoma suillum PS | 0.42 | Dsui_1690 | | cAMP-binding protein | 0.53 | Dsui_2652 | | hydrolase, TatD family | low | > 51 |
| Kangiella aquimarina DSM 16071 | 0.28 | B158DRAFT_0264 | | cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases | 0.47 | B158DRAFT_1745 | | hydrolase, TatD family | low | > 40 |
| Pseudomonas fluorescens GW456-L13 | 0.27 | PfGW456L13_1224 | | Vfr transcriptional regulator / Cyclic AMP receptor protein | 0.41 | PfGW456L13_2112 | | Putative deoxyribonuclease YcfH | low | > 87 |
| Marinobacter adhaerens HP15 | 0.27 | HP15_3307 | | transcriptional regulator, Crp/Fnr family | 0.29 | HP15_3420 | | hydrolase, TatD family | low | > 73 |
| Pseudomonas fluorescens FW300-N2E3 | 0.27 | AO353_07200 | | cyclic AMP receptor protein | 0.41 | AO353_01325 | | hydrolase TatD | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.27 | Pf1N1B4_2551 | | Vfr transcriptional regulator / Cyclic AMP receptor protein | 0.39 | Pf1N1B4_420 | | Putative deoxyribonuclease YcfH | low | > 87 |
| Acinetobacter radioresistens SK82 | 0.27 | MPMX26_01094 | | Cyclic AMP receptor-like protein | 0.39 | MPMX26_01224 | | putative metal-dependent hydrolase YcfH | low | > 36 |
| Pseudomonas fluorescens SBW25 | 0.27 | PFLU_RS27355 | | cAMP-activated global transcriptional regulator CRP | 0.40 | PFLU_RS23020 | | TatD family hydrolase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.27 | PFLU_RS27355 | | cAMP-activated global transcriptional regulator CRP | 0.40 | PFLU_RS23020 | | TatD family hydrolase | low | > 109 |
| Pseudomonas sp. S08-1 | 0.27 | OH686_15145 | | Cyclic AMP receptor protein | 0.39 | OH686_22180 | | Uncharacterized metal-dependent hydrolase YcfH | low | > 80 |
| Pseudomonas fluorescens FW300-N2C3 | 0.26 | AO356_14450 | | cyclic AMP receptor protein | 0.40 | AO356_20205 | | hydrolase TatD | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.26 | Pf6N2E2_4828 | | Vfr transcriptional regulator / Cyclic AMP receptor protein | 0.40 | Pf6N2E2_5960 | | Putative deoxyribonuclease YcfH | low | > 103 |
| Pseudomonas putida KT2440 | 0.26 | PP_0424 | | DNA-binding transcriptional dual regulator | 0.41 | PP_1967 | | tRNA D-aminoacylase | low | > 96 |
| Pseudomonas sp. RS175 | 0.26 | PFR28_04041 | | Cyclic AMP receptor-like protein | 0.40 | PFR28_03002 | | putative metal-dependent hydrolase YcfH | low | > 88 |
| Pseudomonas simiae WCS417 | 0.26 | PS417_25700 | | cyclic AMP receptor protein | 0.39 | PS417_21405 | | hydrolase TatD | low | > 88 |
| Pseudomonas stutzeri RCH2 | 0.25 | Psest_3646 | | cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases | 0.39 | Psest_1696 | | hydrolase, TatD family | low | > 67 |
| Pseudomonas syringae pv. syringae B728a | 0.24 | Psyr_4577 | | Cyclic nucleotide-binding:Bacterial regulatory protein, Crp | 0.38 | Psyr_1655 | | TatD-related deoxyribonuclease | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.24 | Psyr_4577 | | Cyclic nucleotide-binding:Bacterial regulatory protein, Crp | 0.38 | Psyr_1655 | | TatD-related deoxyribonuclease | low | > 86 |
| Dickeya dadantii 3937 | 0.24 | DDA3937_RS19445 | | cAMP-activated global transcriptional regulator CRP | 0.40 | DDA3937_RS13085 | | metal-dependent hydrolase | — | — |
| Dickeya dianthicola 67-19 | 0.24 | HGI48_RS19565 | | cAMP-activated global transcriptional regulator CRP | 0.39 | HGI48_RS13150 | | metal-dependent hydrolase | — | — |
| Dickeya dianthicola ME23 | 0.24 | DZA65_RS20650 | | cAMP-activated global transcriptional regulator CRP | 0.39 | DZA65_RS13620 | | metal-dependent hydrolase | — | — |
| Erwinia tracheiphila SCR3 | 0.23 | LU632_RS22800 | crp | cAMP-activated global transcriptional regulator CRP | 0.38 | LU632_RS14785 | | metal-dependent hydrolase | — | — |
| Escherichia coli ECRC62 | 0.23 | BNILDI_02480 | crp | cAMP-activated global transcriptional regulator CRP | 0.38 | BNILDI_19230 | ycfH | metal-dependent hydrolase | — | — |
| Escherichia coli ECRC101 | 0.23 | OKFHMN_17240 | crp | cAMP-activated global transcriptional regulator CRP | 0.38 | OKFHMN_03540 | ycfH | metal-dependent hydrolase | — | — |
| Escherichia coli BW25113 | 0.23 | b3357 | crp | DNA-binding transcriptional dual regulator (NCBI) | 0.38 | b1100 | ycfH | predicted metallodependent hydrolase (NCBI) | — | — |
| Escherichia coli Nissle 1917 | 0.23 | ECOLIN_RS19230 | | cAMP-activated global transcriptional regulator CRP | 0.38 | ECOLIN_RS06350 | | metal-dependent hydrolase | — | — |
| Escherichia coli ECRC98 | 0.23 | JDDGAC_20870 | crp | cAMP-activated global transcriptional regulator CRP | 0.38 | JDDGAC_07200 | ycfH | metal-dependent hydrolase | — | — |
| Escherichia coli ECOR27 | 0.23 | NOLOHH_09040 | crp | cAMP-activated global transcriptional regulator CRP | 0.38 | NOLOHH_21070 | ycfH | metal-dependent hydrolase | — | — |
| Klebsiella michiganensis M5al | 0.23 | BWI76_RS25990 | | cAMP-activated global transcriptional regulator CRP | 0.37 | BWI76_RS11125 | | metal-dependent hydrolase | — | — |
| Rahnella sp. WP5 | 0.23 | EX31_RS04620 | | cAMP-activated global transcriptional regulator CRP | 0.41 | EX31_RS24470 | | metal-dependent hydrolase | — | — |
| Escherichia coli ECRC102 | 0.23 | NIAGMN_15010 | crp | cAMP-activated global transcriptional regulator CRP | 0.38 | NIAGMN_24290 | ycfH | metal-dependent hydrolase | — | — |
| Enterobacter asburiae PDN3 | 0.23 | EX28DRAFT_4172 | | cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases | 0.38 | EX28DRAFT_1829 | | hydrolase, TatD family | — | — |
| Serratia liquefaciens MT49 | 0.23 | IAI46_23580 | | cAMP-activated global transcriptional regulator CRP | 0.41 | IAI46_09825 | | metal-dependent hydrolase | — | — |
| Pectobacterium carotovorum WPP14 | 0.23 | HER17_RS01915 | | cAMP-activated global transcriptional regulator CRP | 0.40 | HER17_RS08685 | | metal-dependent hydrolase | — | — |
| Enterobacter sp. TBS_079 | 0.23 | MPMX20_04260 | | cAMP-activated global transcriptional regulator CRP | 0.38 | MPMX20_01780 | | putative metal-dependent hydrolase YcfH | — | — |
| Escherichia coli ECRC101 | 0.23 | MCAODC_07770 | crp | cAMP-activated global transcriptional regulator CRP | 0.38 | MCAODC_22900 | ycfH | metal-dependent hydrolase | — | — |
| Escherichia fergusonii Becca | 0.23 | EFB2_00465 | | cAMP-activated global transcriptional regulator CRP | 0.37 | EFB2_02875 | | putative metal-dependent hydrolase YcfH | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.23 | OHPLBJKB_00345 | | cAMP-activated global transcriptional regulator CRP | 0.38 | OHPLBJKB_02566 | | putative metal-dependent hydrolase YcfH | — | — |
| Pantoea sp. MT58 | 0.23 | IAI47_01965 | | cAMP-activated global transcriptional regulator CRP | 0.39 | IAI47_12035 | | metal-dependent hydrolase | — | — |
| Escherichia coli BL21 | 0.23 | ECD_03208 | | cAMP-activated global transcription factor, mediator of catabolite repression | 0.38 | ECD_01096 | | putative DNase | — | — |
| Escherichia coli ECRC99 | 0.23 | KEDOAH_10900 | crp | cAMP-activated global transcriptional regulator CRP | 0.38 | KEDOAH_24215 | ycfH | metal-dependent hydrolase | — | — |
| Escherichia coli ECOR38 | 0.23 | HEPCGN_16065 | crp | cAMP-activated global transcriptional regulator CRP | 0.38 | HEPCGN_23940 | ycfH | metal-dependent hydrolase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.23 | GFF3712 | | Cyclic AMP receptor protein | 0.37 | GFF3382 | | Putative deoxyribonuclease YcfH | low | > 78 |
| Shewanella loihica PV-4 | 0.22 | Shew_0585 | | cAMP-regulatory protein (RefSeq) | 0.34 | Shew_1582 | | TatD family hydrolase (RefSeq) | low | > 60 |
| Shewanella sp. ANA-3 | 0.22 | Shewana3_0617 | | cAMP-regulatory protein (RefSeq) | 0.34 | Shewana3_1769 | | TatD family hydrolase (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.22 | SO0624 | crp | catabolite gene activator (NCBI ptt file) | 0.34 | SO2610 | | hydrolase, TatD family (NCBI ptt file) | low | > 76 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.22 | DVU2547 | | transcriptional regulator, putative (TIGR) | 0.25 | DVU3202 | | hydrolase, TatD family (TIGR) | low | > 55 |
| Shewanella amazonensis SB2B | 0.22 | Sama_3004 | | cAMP-regulatory protein (RefSeq) | 0.39 | Sama_2040 | | TatD family hydrolase (RefSeq) | low | > 62 |
| Vibrio cholerae E7946 ATCC 55056 | 0.22 | CSW01_13230 | | cAMP-activated global transcriptional regulator CRP | 0.42 | CSW01_10060 | | YchF/TatD family DNA exonuclease | — | — |
| Sinorhizobium meliloti 1021 | 0.21 | SMc02175 | | transcriptional regulator | 0.38 | SMc01193 | | hypothetical protein | low | > 103 |
| Desulfovibrio vulgaris Miyazaki F | 0.20 | DvMF_0993 | | transcriptional regulator, Crp/Fnr family (RefSeq) | 0.23 | DvMF_2230 | | hydrolase, TatD family (RefSeq) | low | > 51 |
| Agrobacterium fabrum C58 | 0.20 | Atu4380 | | Crp family transcriptional regulator | 0.36 | Atu1495 | | hypothetical protein | low | > 89 |
| Mycobacterium tuberculosis H37Rv | 0.19 | Rv3676 | | Transcriptional regulatory protein Crp (Crp/Fnr-family) | 0.25 | Rv1008 | | Probable deoxyribonuclease TatD (YJJV protein) | — | — |
| Castellaniella sp019104865 MT123 | 0.18 | ABCV34_RS13935 | | Crp/Fnr family transcriptional regulator | 0.54 | ABCV34_RS03960 | | TatD family hydrolase | low | > 48 |
| Rhodopseudomonas palustris CGA009 | 0.18 | TX73_021475 | | Crp/Fnr family transcriptional regulator | 0.39 | TX73_014390 | | TatD family hydrolase | low | > 86 |
| Rhodospirillum rubrum S1H | 0.12 | Rru_A1245 | | Transcriptional Regulator, Crp/Fnr family (NCBI) | 0.40 | Rru_A1700 | | TatD-related deoxyribonuclease (NCBI) | low | > 58 |
| Phocaeicola dorei CL03T12C01 | 0.12 | ABI39_RS17950 | | Crp/Fnr family transcriptional regulator | 0.20 | ABI39_RS09860 | | TatD family hydrolase | low | > 72 |
| Phocaeicola vulgatus CL09T03C04 | 0.12 | HMPREF1058_RS06075 | | Crp/Fnr family transcriptional regulator | 0.20 | HMPREF1058_RS14230 | | TatD family hydrolase | — | — |
Not shown: 4 genomes with orthologs for GFF774 only; 35 genomes with orthologs for GFF4665 only