Conservation of cofitness between PS417_16525 and PS417_21750 in Pseudomonas simiae WCS417

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_16525 isocitrate dehydrogenase 1.0 PS417_21750 acetyl-CoA synthetase 0.33 7
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS18565 NADP-dependent isocitrate dehydrogenase 0.99 PFLU_RS23355 acetate--CoA ligase low > 109
Pseudomonas fluorescens SBW25 0.99 PFLU_RS18565 NADP-dependent isocitrate dehydrogenase 0.99 PFLU_RS23355 acetate--CoA ligase low > 109
Pseudomonas sp. RS175 0.98 PFR28_02616 Isocitrate dehydrogenase [NADP] 0.96 PFR28_03289 Acetyl-coenzyme A synthetase low > 88
Pseudomonas fluorescens FW300-N2E2 0.98 Pf6N2E2_289 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 0.95 Pf6N2E2_5659 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.44 35
Pseudomonas fluorescens FW300-N2E3 0.98 AO353_27690 isocitrate dehydrogenase 0.97 AO353_03060 Acetyl-coenzyme A synthetase (EC 6.2.1.1) (from data) low > 101
Pseudomonas fluorescens FW300-N2C3 0.98 AO356_22135 isocitrate dehydrogenase 0.96 AO356_18695 Acetyl-coenzyme A synthetase (EC 6.2.1.1) (from data) 0.42 4
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_2643 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 0.97 PfGW456L13_1963 Acetyl-coenzyme A synthetase (EC 6.2.1.1) low > 87
Pseudomonas fluorescens FW300-N1B4 0.98 Pf1N1B4_4052 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 0.97 Pf1N1B4_3430 Acetyl-coenzyme A synthetase (EC 6.2.1.1) low > 87
Pseudomonas putida KT2440 0.93 PP_4011 isocitrate dehydrogenase, NADP(+)-specific 0.92 PP_4487 acetyl-CoA synthetase low > 96
Pseudomonas sp. S08-1 0.93 OH686_00220 isocitrate dehydrogenase, NADP-dependent 0.92 OH686_21250 acetate--CoA ligase — —
Pseudomonas stutzeri RCH2 0.90 Psest_2024 isocitrate dehydrogenase, NADP-dependent, prokaryotic type 0.80 Psest_2657 acetate--CoA ligase low > 67
Variovorax sp. OAS795 0.80 ABID97_RS16920 NADP-dependent isocitrate dehydrogenase 0.47 ABID97_RS27430 acetate--CoA ligase low > 91
Ralstonia solanacearum PSI07 0.79 RPSI07_RS12425 NADP-dependent isocitrate dehydrogenase 0.47 RPSI07_RS14880 acetate--CoA ligase — —
Escherichia coli ECRC101 0.78 OKFHMN_00760 icd NADP-dependent isocitrate dehydrogenase 0.70 OKFHMN_12830 acs acetate--CoA ligase — —
Escherichia coli ECRC101 0.78 MCAODC_22325 icd NADP-dependent isocitrate dehydrogenase 0.70 MCAODC_03340 acs acetate--CoA ligase — —
Escherichia coli ECRC99 0.78 KEDOAH_24845 icd NADP-dependent isocitrate dehydrogenase 0.70 KEDOAH_15320 acs acetate--CoA ligase — —
Pantoea sp. MT58 0.78 IAI47_11900 NADP-dependent isocitrate dehydrogenase 0.71 IAI47_17715 acetate--CoA ligase — —
Cupriavidus basilensis FW507-4G11 0.78 RR42_RS17135 isocitrate dehydrogenase 0.47 RR42_RS13880 AMP-dependent synthetase low > 128
Escherichia coli ECRC102 0.78 NIAGMN_24905 icd NADP-dependent isocitrate dehydrogenase 0.70 NIAGMN_10675 acs acetate--CoA ligase — —
Escherichia coli ECRC98 0.78 JDDGAC_06605 icd NADP-dependent isocitrate dehydrogenase 0.70 JDDGAC_16465 acs acetate--CoA ligase — —
Escherichia coli BW25113 0.78 b1136 icd isocitrate dehydrogenase (NCBI) 0.71 b4069 acs acetyl-coenzyme A synthetase (NCBI) — —
Serratia liquefaciens MT49 0.78 IAI46_10460 NADP-dependent isocitrate dehydrogenase 0.70 IAI46_01405 acetate--CoA ligase — —
Escherichia coli ECRC62 0.78 BNILDI_19050 icd NADP-dependent isocitrate dehydrogenase 0.71 BNILDI_06445 acs acetate--CoA ligase — —
Escherichia coli Nissle 1917 0.78 ECOLIN_RS06640 NADP-dependent isocitrate dehydrogenase 0.70 ECOLIN_RS23550 acetate--CoA ligase — —
Escherichia coli ECOR38 0.78 HEPCGN_24245 icd NADP-dependent isocitrate dehydrogenase 0.71 HEPCGN_11455 acs acetate--CoA ligase — —
Escherichia coli ECOR27 0.78 NOLOHH_20885 icd NADP-dependent isocitrate dehydrogenase 0.71 NOLOHH_05080 acs acetate--CoA ligase — —
Escherichia fergusonii Becca 0.78 EFB2_02839 Isocitrate dehydrogenase [NADP] 0.70 EFB2_04520 Acetyl-coenzyme A synthetase — —
Escherichia coli BL21 0.78 ECD_01134 isocitrate dehydrogenase; e14 prophage attachment site; tellurite reductase 0.71 ECD_03941 acetyl-CoA synthetase — —
Klebsiella michiganensis M5al 0.78 BWI76_RS11330 isocitrate dehydrogenase (NADP(+)) 0.71 BWI76_RS02095 acetyl-coenzyme A synthetase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_02532 Isocitrate dehydrogenase [NADP] 0.71 OHPLBJKB_03971 Acetyl-coenzyme A synthetase — —
Acinetobacter radioresistens SK82 0.78 MPMX26_01012 Isocitrate dehydrogenase [NADP] 0.64 MPMX26_02906 Acetyl-coenzyme A synthetase low > 36
Paraburkholderia sabiae LMG 24235 0.78 QEN71_RS02980 NADP-dependent isocitrate dehydrogenase 0.47 QEN71_RS23765 acetate--CoA ligase 0.50 22
Paraburkholderia bryophila 376MFSha3.1 0.78 H281DRAFT_04085 isocitrate dehydrogenase (NADP) 0.47 H281DRAFT_04953 acetyl-coenzyme A synthetase 0.40 18
Burkholderia phytofirmans PsJN 0.78 BPHYT_RS15730 isocitrate dehydrogenase 0.47 BPHYT_RS07000 acetyl-CoA synthetase low > 109
Ralstonia solanacearum GMI1000 0.78 RS_RS12485 NADP-dependent isocitrate dehydrogenase 0.47 RS_RS09815 acetyl-coenzyme A synthetase — —
Ralstonia solanacearum IBSBF1503 0.78 RALBFv3_RS04855 isocitrate dehydrogenase (NADP(+)) 0.47 RALBFv3_RS02445 acetate--CoA ligase — —
Ralstonia solanacearum UW163 0.78 UW163_RS08770 isocitrate dehydrogenase (NADP(+)) 0.47 UW163_RS11280 acetate--CoA ligase — —
Rahnella sp. WP5 0.77 EX31_RS24590 NADP-dependent isocitrate dehydrogenase 0.70 EX31_RS09040 acetate--CoA ligase — —
Paraburkholderia graminis OAS925 0.77 ABIE53_003317 isocitrate dehydrogenase 0.47 ABIE53_001664 acetyl-CoA synthetase low > 113
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF3422 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 0.70 GFF1452 Acetyl-coenzyme A synthetase (EC 6.2.1.1) — —
Ralstonia sp. UNC404CL21Col 0.77 ABZR87_RS00460 NADP-dependent isocitrate dehydrogenase 0.48 ABZR87_RS14360 acetate--CoA ligase — —
Enterobacter sp. TBS_079 0.77 MPMX20_01820 Isocitrate dehydrogenase [NADP] 0.70 MPMX20_00291 Acetyl-coenzyme A synthetase — —
Enterobacter asburiae PDN3 0.77 EX28DRAFT_1794 isocitrate dehydrogenase (NADP) (EC 1.1.1.42) 0.70 EX28DRAFT_4232 acetate--CoA ligase — —
Erwinia tracheiphila SCR3 0.77 LU632_RS14560 icd NADP-dependent isocitrate dehydrogenase 0.70 LU632_RS23305 acs acetate--CoA ligase — —
Acidovorax sp. GW101-3H11 0.77 Ac3H11_2377 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 0.46 Ac3H11_951 Acetyl-coenzyme A synthetase (EC 6.2.1.1) low > 79
Pectobacterium carotovorum WPP14 0.77 HER17_RS11610 NADP-dependent isocitrate dehydrogenase 0.72 HER17_RS17630 acetate--CoA ligase — —
Dickeya dadantii 3937 0.76 DDA3937_RS11470 NADP-dependent isocitrate dehydrogenase 0.71 DDA3937_RS03480 acetate--CoA ligase — —
Dickeya dianthicola ME23 0.76 DZA65_RS11850 NADP-dependent isocitrate dehydrogenase 0.70 DZA65_RS03695 acetate--CoA ligase — —
Dickeya dianthicola 67-19 0.76 HGI48_RS11515 NADP-dependent isocitrate dehydrogenase 0.70 HGI48_RS03580 acetate--CoA ligase — —
Herbaspirillum seropedicae SmR1 0.75 HSERO_RS07015 isocitrate dehydrogenase 0.47 HSERO_RS07770 acetyl-CoA synthetase low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.71 GFF4515 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 0.46 GFF4107 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.67 33
Dechlorosoma suillum PS 0.70 Dsui_3296 isocitrate dehydrogenase, NADP-dependent, prokaryotic type 0.48 Dsui_2003 acetate--CoA ligase low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.50 DVU0477 icd isocitrate dehydrogenase, NADP-dependent (TIGR) 0.54 DVU2969 acetoacetyl-CoA synthase (TIGR) — —
Desulfovibrio vulgaris Miyazaki F 0.49 DvMF_1739 isocitrate/isopropylmalate dehydrogenase (RefSeq) 0.54 DvMF_1775 acetate/CoA ligase (RefSeq) — —
Shewanella sp. ANA-3 0.22 Shewana3_2890 isocitrate dehydrogenase (RefSeq) 0.73 Shewana3_2523 acetyl-CoA synthetase (RefSeq) — —
Lysobacter sp. OAE881 0.22 ABIE51_RS14200 isocitrate dehydrogenase 0.64 ABIE51_RS01660 acetate--CoA ligase — —
Shewanella oneidensis MR-1 0.22 SO1538 isocitrate dehydrogenase, NAD-dependent (NCBI ptt file) 0.73 SO2743 acs acetyl-coenzyme A synthetase (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.21 Sama_2423 isocitrate dehydrogenase (RefSeq) 0.72 Sama_2079 acetyl-CoA synthetase (RefSeq) — —
Xanthomonas campestris pv. campestris strain 8004 0.21 Xcc-8004.4057.1 Isocitrate dehydrogenase [NAD] (EC 1.1.1.41) 0.65 Xcc-8004.5157.1 Acetyl-coenzyme A synthetase (EC 6.2.1.1) — —

Not shown: 10 genomes with orthologs for PS417_16525 only; 27 genomes with orthologs for PS417_21750 only