Conservation of cofitness between Psest_0536 and Psest_0415 in Pseudomonas stutzeri RCH2

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0536 thiamine-phosphate pyrophosphorylase 1.0 Psest_0415 dethiobiotin synthase 0.41 10
Pseudomonas sp. S08-1 0.74 OH686_09190 Thiamin-phosphate pyrophosphorylase 0.68 OH686_10335 dethiobiotin synthase low > 80
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_2717 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 0.69 Pf1N1B4_2491 Dethiobiotin synthetase (EC 6.3.3.3) — —
Pseudomonas fluorescens FW300-N2E3 0.69 AO353_06355 thiamine-phosphate pyrophosphorylase 0.69 AO353_07505 dethiobiotin synthetase low > 101
Pseudomonas fluorescens FW300-N2C3 0.68 AO356_15430 thiamine-phosphate pyrophosphorylase 0.69 AO356_14155 dethiobiotin synthetase 0.22 48
Pseudomonas sp. RS175 0.68 PFR28_03844 Thiamine-phosphate synthase 0.69 PFR28_04099 ATP-dependent dethiobiotin synthetase BioD 1 — —
Pseudomonas simiae WCS417 0.68 PS417_24605 thiamine-phosphate pyrophosphorylase 0.68 PS417_25985 dethiobiotin synthetase low > 88
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_1384 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 0.69 PfGW456L13_1151 Dethiobiotin synthetase (EC 6.3.3.3) low > 87
Pseudomonas fluorescens SBW25-INTG 0.68 PFLU_RS26535 thiamine phosphate synthase 0.68 PFLU_RS27630 dethiobiotin synthase low > 109
Pseudomonas fluorescens SBW25 0.68 PFLU_RS26535 thiamine phosphate synthase 0.68 PFLU_RS27630 dethiobiotin synthase low > 109
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_5023 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 0.69 Pf6N2E2_4764 Dethiobiotin synthetase (EC 6.3.3.3) low > 103
Pseudomonas putida KT2440 0.65 PP_4783 Thiamine-phosphate synthase 0.67 PP_0366 dethiobiotin synthetase — —
Pseudomonas syringae pv. syringae B728a 0.63 Psyr_4341 thiamine-phosphate diphosphorylase 0.69 Psyr_4683 dethiobiotin synthase 0.69 8
Pseudomonas syringae pv. syringae B728a ΔmexB 0.63 Psyr_4341 thiamine-phosphate diphosphorylase 0.69 Psyr_4683 dethiobiotin synthase 0.46 86
Marinobacter adhaerens HP15 0.45 HP15_348 thiamine-phosphate pyrophosphorylase 0.45 HP15_2482 dethiobiotin synthetase — —
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS17410 thiamine phosphate synthase 0.42 ABZR86_RS12700 dethiobiotin synthase — —
Rhodanobacter sp. FW510-T8 0.39 OKGIIK_17095 Thiamine-phosphate synthase 0.41 OKGIIK_16455 bioD dethiobiotin synthase low > 52
Lysobacter sp. OAE881 0.38 ABIE51_RS17410 thiamine phosphate synthase 0.42 ABIE51_RS17990 dethiobiotin synthase — —
Rhodanobacter denitrificans FW104-10B01 0.37 LRK54_RS06575 thiamine phosphate synthase 0.39 LRK54_RS07180 dethiobiotin synthase low > 59
Rhodanobacter denitrificans MT42 0.37 LRK55_RS06320 thiamine phosphate synthase 0.38 LRK55_RS06915 dethiobiotin synthase low > 63
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.1132.1 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 0.32 Xcc-8004.4530.1 Dethiobiotin synthetase (EC 6.3.3.3) low > 74
Dechlorosoma suillum PS 0.33 Dsui_0663 thiamine-phosphate pyrophosphorylase 0.45 Dsui_2884 dethiobiotin synthase — —
Herbaspirillum seropedicae SmR1 0.32 HSERO_RS02140 thiamine-phosphate synthase 0.37 HSERO_RS12255 dethiobiotin synthetase low > 78
Castellaniella sp019104865 MT123 0.30 ABCV34_RS10745 thiamine phosphate synthase 0.14 ABCV34_RS15285 dethiobiotin synthase — —
Phocaeicola vulgatus CL09T03C04 0.24 HMPREF1058_RS03290 thiamine phosphate synthase 0.19 HMPREF1058_RS17975 ATP-dependent dethiobiotin synthetase BioD 0.55 61
Bacteroides stercoris CC31F 0.23 HMPREF1181_RS14675 thiamine phosphate synthase 0.17 HMPREF1181_RS15515 ATP-dependent dethiobiotin synthetase BioD — —
Bacteroides ovatus ATCC 8483 0.22 BACOVA_02360 thiamine-phosphate diphosphorylase 0.16 BACOVA_00874 dethiobiotin synthase low > 94
Desulfovibrio vulgaris Hildenborough JW710 0.21 DVU2091 thiE-1 thiamine-phosphate pyrophosphorylase (TIGR) 0.12 DVU2565 bioD dethiobiotin synthetase (TIGR) low > 55
Bacteroides thetaiotaomicron VPI-5482 0.21 BT0652 putative thiamine-phosphate pyrophosphorylase (NCBI ptt file) 0.16 BT1446 dethiobiotin synthetase (NCBI ptt file) 0.38 6
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.20 GFF4199 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 0.42 GFF674 Dethiobiotin synthetase (EC 6.3.3.3) low > 78
Pectobacterium carotovorum WPP14 0.20 HER17_RS20385 thiamine phosphate synthase 0.44 HER17_RS13445 dethiobiotin synthase low > 75
Enterobacter asburiae PDN3 0.20 EX28DRAFT_4535 thiamine-phosphate diphosphorylase 0.45 EX28DRAFT_2213 dethiobiotin synthase low > 76
Escherichia coli ECOR38 0.20 HEPCGN_12015 thiE thiamine phosphate synthase 0.44 HEPCGN_01655 bioD dethiobiotin synthase low > 85
Escherichia coli ECRC99 0.19 KEDOAH_14780 thiE thiamine phosphate synthase 0.45 KEDOAH_21525 bioD dethiobiotin synthase — —
Escherichia coli ECRC98 0.19 JDDGAC_17005 thiE thiamine phosphate synthase 0.45 JDDGAC_10020 bioD dethiobiotin synthase — —
Escherichia coli ECRC102 0.19 NIAGMN_11130 thiE thiamine phosphate synthase 0.45 NIAGMN_04430 bioD dethiobiotin synthase — —
Escherichia coli ECRC101 0.19 OKFHMN_13380 thiE thiamine phosphate synthase 0.45 OKFHMN_06385 bioD dethiobiotin synthase — —
Escherichia coli ECRC62 0.19 BNILDI_06000 thiE thiamine phosphate synthase 0.43 BNILDI_21025 bioD dethiobiotin synthase — —
Escherichia coli BW25113 0.19 b3993 thiE thiamine-phosphate pyrophosphorylase (NCBI) 0.44 b0778 bioD dethiobiotin synthetase (NCBI) low > 76
Escherichia coli BL21 0.19 ECD_03870 thiamine phosphate synthase (thiamine phosphate pyrophosphorylase) 0.45 ECD_00745 dethiobiotin synthetase low > 60
Escherichia coli ECOR27 0.19 NOLOHH_05525 thiE thiamine phosphate synthase 0.44 NOLOHH_22755 bioD dethiobiotin synthase low > 57
Escherichia coli ECRC101 0.19 MCAODC_03880 thiE thiamine phosphate synthase 0.45 MCAODC_25600 bioD dethiobiotin synthase — —
Pantoea sp. MT58 0.19 IAI47_18090 thiamine phosphate synthase 0.43 IAI47_13515 ATP-dependent dethiobiotin synthetase BioD low > 76
Escherichia coli Nissle 1917 0.19 ECOLIN_RS23035 thiamine phosphate synthase 0.45 ECOLIN_RS04145 dethiobiotin synthase — —
Escherichia fergusonii Becca 0.19 EFB2_04618 Thiamine-phosphate synthase 0.45 EFB2_03327 ATP-dependent dethiobiotin synthetase BioD 1 low > 86
Klebsiella michiganensis M5al 0.19 BWI76_RS01550 thiamine phosphate synthase 0.44 BWI76_RS08775 dethiobiotin synthase low > 92
Escherichia coli HS(pFamp)R (ATCC 700891) 0.19 OHPLBJKB_04057 Thiamine-phosphate synthase 0.45 OHPLBJKB_02935 ATP-dependent dethiobiotin synthetase BioD 1 low > 73
Dickeya dadantii 3937 0.19 DDA3937_RS01170 thiamine phosphate synthase 0.43 DDA3937_RS08525 ATP-dependent dethiobiotin synthetase BioD low > 74
Rhizobium sp. OAE497 0.19 ABIE40_RS25925 thiamine phosphate synthase 0.15 ABIE40_RS21065 dethiobiotin synthase low > 107
Methanococcus maripaludis S2 0.19 MMP_RS05880 thiamine phosphate synthase 0.16 MMP_RS08095 dethiobiotin synthase — —
Agrobacterium fabrum C58 0.19 Atu3289 thiamine-phosphate pyrophosphorylase 0.17 Atu3999 dithiobiotin synthetase 0.58 61
Erwinia tracheiphila SCR3 0.19 LU632_RS00965 thiE thiamine phosphate synthase 0.40 LU632_RS09145 bioD dethiobiotin synthase — —
Dickeya dianthicola 67-19 0.19 HGI48_RS01165 thiamine phosphate synthase 0.44 HGI48_RS08690 ATP-dependent dethiobiotin synthetase BioD low > 71
Phaeobacter inhibens DSM 17395 0.18 PGA1_c09050 thiamine-phosphate pyrophosphorylase ThiE 0.14 PGA1_c09140 dethiobiotin synthetase BioD 0.29 33
Enterobacter sp. TBS_079 0.18 MPMX20_00216 Thiamine-phosphate synthase 0.44 MPMX20_01406 ATP-dependent dethiobiotin synthetase BioD 1 low > 85
Dickeya dianthicola ME23 0.18 DZA65_RS01210 thiamine phosphate synthase 0.43 DZA65_RS08980 ATP-dependent dethiobiotin synthetase BioD low > 75
Rahnella sp. WP5 0.18 EX31_RS16810 thiamine phosphate synthase 0.42 EX31_RS23710 ATP-dependent dethiobiotin synthetase BioD low > 89
Pontibacter actiniarum KMM 6156, DSM 19842 0.17 CA264_20425 thiamine phosphate synthase 0.13 CA264_02415 dethiobiotin synthase low > 74
Burkholderia phytofirmans PsJN 0.17 BPHYT_RS17770 thiamine-phosphate pyrophosphorylase 0.35 BPHYT_RS02155 dithiobiotin synthetase — —
Serratia liquefaciens MT49 0.17 IAI46_01315 thiamine phosphate synthase 0.45 IAI46_06540 ATP-dependent dethiobiotin synthetase BioD low > 86
Rhodopseudomonas palustris CGA009 0.13 TX73_018535 thiamine phosphate synthase 0.12 TX73_015410 dethiobiotin synthase — —

Not shown: 16 genomes with orthologs for Psest_0536 only; 23 genomes with orthologs for Psest_0415 only