Conservation of cofitness between GFF1922 and GFF4124 in Sphingobium sp. HT1-2

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF1922 Glycine cleavage system H protein 1.0 GFF4124 ABC transporter, permease protein (cluster 9, phospholipid) 0.73 30
Sphingomonas koreensis DSMZ 15582 0.75 Ga0059261_3257 glycine cleavage system H protein 0.66 Ga0059261_1871 ABC transport permease subunit low > 68
Azospirillum sp. SherDot2 0.72 MPMX19_01030 Glycine cleavage system H protein 0.37 MPMX19_06117 hypothetical protein low > 112
Xanthobacter sp. DMC5 0.64 GFF1877 Glycine cleavage system H protein 0.28 GFF988 hypothetical protein
Sinorhizobium meliloti 1021 0.63 SMc02048 glycine cleavage system protein H 0.29 SMc00174 hypothetical protein low > 103
Agrobacterium fabrum C58 0.63 Atu1463 glycine cleavage system component H 0.30 Atu1647 ABC transporter, membrane spanning protein low > 89
Brevundimonas sp. GW460-12-10-14-LB2 0.62 A4249_RS09330 glycine cleavage system protein GcvH 0.30 A4249_RS08600 ABC transporter permease low > 48
Rhodopseudomonas palustris CGA009 0.62 TX73_019930 glycine cleavage system protein GcvH 0.33 TX73_020530 MlaE family lipid ABC transporter permease subunit low > 86
Rhizobium sp. OAE497 0.61 ABIE40_RS09945 glycine cleavage system protein GcvH 0.30 ABIE40_RS10430 MlaE family lipid ABC transporter permease subunit low > 107
Bosea sp. OAE506 0.61 ABIE41_RS22925 glycine cleavage system protein GcvH 0.30 ABIE41_RS21900 ABC transporter permease low > 77
Caulobacter crescentus NA1000 0.57 CCNA_03464 glycine cleavage system H protein 0.30 CCNA_02403 ABC transporter permease protein low > 66
Caulobacter crescentus NA1000 Δfur 0.57 CCNA_03464 glycine cleavage system H protein 0.30 CCNA_02403 ABC transporter permease protein low > 67
Hydrogenophaga sp. GW460-11-11-14-LB1 0.57 GFF5214 Glycine cleavage system H protein 0.21 GFF3873 ABC-type transport system involved in resistance to organic solvents, permease component low > 90
Acidovorax sp. GW101-3H11 0.57 Ac3H11_166 Glycine cleavage system H protein 0.24 Ac3H11_2171 ABC-type transport system involved in resistance to organic solvents, permease component USSDB6A low > 79
Variovorax sp. SCN45 0.56 GFF6477 Glycine cleavage system H protein 0.25 GFF5043 ABC transporter, permease protein (cluster 9, phospholipid)
Dinoroseobacter shibae DFL-12 0.55 Dshi_2681 glycine cleavage system H protein (RefSeq) 0.34 Dshi_2050 protein of unknown function DUF140 (RefSeq)
Variovorax sp. OAS795 0.55 ABID97_RS19650 glycine cleavage system protein GcvH 0.27 ABID97_RS04010 ABC transporter permease
Marinobacter adhaerens HP15 0.54 HP15_459 glycine cleavage H-protein, subgroup 0.29 HP15_1572 ABC transporter, permease protein low > 73
Pseudomonas sp. BP01 0.52 JOY50_RS11305 gcvH glycine cleavage system protein GcvH 0.29 JOY50_RS21010 ABC transporter permease low > 84
Pseudomonas putida KT2440 0.51 PP_0989 glycine cleavage system H protein 1 0.29 PP_0142 putative ABC transporter, permease protein low > 96
Pseudomonas sp. SVBP6 0.48 COO64_RS00955 gcvH glycine cleavage system protein GcvH 0.30 COO64_RS02570 ABC transporter permease low > 93
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_620 Glycine cleavage system H protein 0.30 Pf1N1B4_1893 ABC-type transport system involved in resistance to organic solvents, permease component USSDB6A low > 87
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_03495 glycine cleavage system protein H 0.32 AO353_11015 ABC transporter permease low > 101
Pseudomonas sp. DMC3 0.47 GFF5168 Glycine cleavage system H protein 0.33 GFF612 hypothetical protein low > 89
Paraburkholderia graminis OAS925 0.47 ABIE53_000237 glycine cleavage system H protein 0.26 ABIE53_000619 phospholipid/cholesterol/gamma-HCH transport system permease protein low > 113
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_1869 glycine cleavage system H protein (EC 1.4.1.27) (from data) 0.32 PfGW456L13_630 ABC-type transport system involved in resistance to organic solvents, permease component USSDB6A low > 87
Pseudomonas simiae WCS417 0.47 PS417_27250 glycine cleavage system protein H 0.33 PS417_00495 ABC transporter permease low > 88
Dechlorosoma suillum PS 0.47 Dsui_2736 glycine cleavage system H protein 0.27 Dsui_2812 conserved hypothetical integral membrane protein low > 51
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS20065 glycine cleavage system protein H 0.25 RR42_RS00690 ABC transporter permease low > 128
Pseudomonas segetis P6 0.47 MPMX49_04480 Glycine cleavage system H protein 0.34 MPMX49_04400 hypothetical protein low > 75
Pseudomonas fluorescens SBW25 0.46 PFLU_RS23995 glycine cleavage system protein GcvH 0.34 PFLU_RS00485 ABC transporter permease low > 109
Desulfovibrio vulgaris Miyazaki F 0.46 DvMF_0225 glycine cleavage system protein H (RefSeq) 0.33 DvMF_1505 protein of unknown function DUF140 (RefSeq) low > 51
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_5559 Glycine cleavage system H protein 0.31 Pf6N2E2_4143 ABC-type transport system involved in resistance to organic solvents, permease component USSDB6A low > 103
Pseudomonas stutzeri RCH2 0.46 Psest_0182 glycine cleavage system H protein 0.29 Psest_4255 conserved hypothetical integral membrane protein low > 67
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS23995 glycine cleavage system protein GcvH 0.34 PFLU_RS00485 ABC transporter permease low > 109
Paraburkholderia sabiae LMG 24235 0.46 QEN71_RS29210 glycine cleavage system protein GcvH 0.27 QEN71_RS01265 ABC transporter permease low > 153
Pseudomonas lactucae CFBP13502 0.46 GEMAOFIL_04607 Glycine cleavage system H protein 0.33 GEMAOFIL_00302 hypothetical protein low > 93
Pseudomonas sp. RS175 0.46 PFR28_03382 Glycine cleavage system H protein 0.31 PFR28_04643 hypothetical protein low > 88
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.1568.1 Glycine cleavage system H protein 0.32 Xcc-8004.4464.1 ABC-type transport system involved in resistance to organic solvents, permease component USSDB6A low > 74
Ralstonia solanacearum GMI1000 0.46 RS_RS16505 glycine cleavage system protein H 0.26 RS_RS01540 ABC transporter permease low > 80
Pseudomonas aeruginosa PA14 0.46 IKLFDK_27400 glycine cleavage system protein GcvH 0.29 IKLFDK_16320 ABC transporter permease low > 100
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_13040 glycine cleavage system protein H 0.31 AO356_11375 ABC transporter permease low > 104
Lysobacter sp. OAE881 0.45 ABIE51_RS16360 glycine cleavage system protein GcvH 0.35 ABIE51_RS04420 ABC transporter permease low > 62
Ralstonia solanacearum PSI07 0.45 RPSI07_RS08580 glycine cleavage system protein H 0.26 RPSI07_RS22610 ABC transporter permease low > 81
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_02410 glycine cleavage system H protein 0.25 H281DRAFT_02061 phospholipid/cholesterol/gamma-HCH transport system permease protein low > 103
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS19325 glycine cleavage system H protein 0.25 BPHYT_RS02380 ABC transporter permease low > 109
Desulfovibrio vulgaris Hildenborough JW710 0.45 DVU1426 gcvH glycine cleavage system H protein (TIGR) 0.36 DVU0612 STAS domain protein (TIGR) low > 55
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS08655 glycine cleavage system protein H 0.26 RALBFv3_RS10710 ABC transporter permease low > 76
Ralstonia solanacearum UW163 0.44 UW163_RS04955 glycine cleavage system protein H 0.26 UW163_RS02870 ABC transporter permease
Dyella japonica UNC79MFTsu3.2 0.43 ABZR86_RS18880 glycine cleavage system protein GcvH 0.30 ABZR86_RS18860 ABC transporter permease low > 74
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS03930 glycine cleavage system protein GcvH 0.25 ABZR87_RS06515 ABC transporter permease low > 80

Not shown: 66 genomes with orthologs for GFF1922 only; 0 genomes with orthologs for GFF4124 only