| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_3960 | | 3'(2'),5'-bisphosphate nucleotidase, bacterial | 1.0 | Psest_3316 | | Predicted P-loop-containing kinase | 0.24 | 9 |
| Pseudomonas fluorescens SBW25 | 0.69 | PFLU_RS01390 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.87 | PFLU_RS04385 | | RNase adapter RapZ | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.69 | PFLU_RS01390 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.87 | PFLU_RS04385 | | RNase adapter RapZ | low | > 109 |
| Pseudomonas sp. S08-1 | 0.68 | OH686_14315 | | 3'(2'),5'-bisphosphate nucleotidase | 0.88 | OH686_08560 | | RNase adapter protein RapZ | — | — |
| Pseudomonas simiae WCS417 | 0.68 | PS417_01295 | | adenosine-3'(2'),5'-bisphosphate nucleotidase | 0.86 | PS417_04330 | | glmZ(sRNA)-inactivating NTPase | — | — |
| Pseudomonas putida KT2440 | 0.67 | PP_0261 | | adenosine-3'(2'),5'-bisphosphate nucleotidase | 0.84 | PP_0949 | | putative ATP-binding protein UPF0042 | low | > 96 |
| Pseudomonas syringae pv. syringae B728a | 0.66 | Psyr_4940 | | 3'(2'),5'-bisphosphate nucleotidase | 0.85 | Psyr_4150 | | Uncharacterized P-loop ATPase protein UPF0042 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.66 | Psyr_4940 | | 3'(2'),5'-bisphosphate nucleotidase | 0.85 | Psyr_4150 | | Uncharacterized P-loop ATPase protein UPF0042 | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.65 | AO353_11850 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.86 | AO353_05195 | | glmZ(sRNA)-inactivating NTPase | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.65 | PfGW456L13_403 | | 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) | 0.86 | PfGW456L13_5017 | | Hypothetical ATP-binding protein UPF0042, contains P-loop | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.65 | Pf1N1B4_1668 | | 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) | 0.86 | Pf1N1B4_1083 | | Hypothetical ATP-binding protein UPF0042, contains P-loop | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.63 | AO356_10075 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.87 | AO356_07050 | | glmZ(sRNA)-inactivating NTPase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.62 | Pf6N2E2_3885 | | 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) | 0.87 | Pf6N2E2_3270 | | Hypothetical ATP-binding protein UPF0042, contains P-loop | low | > 103 |
| Pseudomonas sp. RS175 | 0.62 | PFR28_04887 | | '3'(2'),5'-bisphosphate nucleotidase CysQ' transl_table=11 | 0.86 | PFR28_00170 | | RNase adapter protein RapZ | low | > 88 |
| Shewanella loihica PV-4 | 0.42 | Shew_1427 | | 3'(2'),5'-bisphosphate nucleotidase (RefSeq) | 0.43 | Shew_3314 | | hypothetical protein (RefSeq) | — | — |
| Lysobacter sp. OAE881 | 0.41 | ABIE51_RS05275 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.42 | ABIE51_RS15975 | | RNase adapter RapZ | low | > 62 |
| Rhodanobacter sp. FW510-T8 | 0.41 | OKGIIK_10995 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.45 | OKGIIK_02250 | rapZ | RNase adapter RapZ | low | > 52 |
| Shewanella oneidensis MR-1 | 0.39 | SO1655 | cysQ-2 | cysQ protein (NCBI ptt file) | 0.44 | SO3964 | | conserved hypothetical protein (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.39 | Shewana3_2791 | | 3'(2'),5'-bisphosphate nucleotidase (RefSeq) | 0.44 | Shewana3_0669 | | hypothetical protein (RefSeq) | low | > 73 |
| Rhodanobacter denitrificans MT42 | 0.37 | LRK55_RS03900 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.43 | LRK55_RS12560 | | RNase adapter RapZ | low | > 63 |
| Shewanella amazonensis SB2B | 0.37 | Sama_2232 | | cysQ protein (RefSeq) | 0.44 | Sama_3091 | | hypothetical protein (RefSeq) | low | > 62 |
| Rhodanobacter denitrificans FW104-10B01 | 0.37 | LRK54_RS04130 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.43 | LRK54_RS12860 | | RNase adapter RapZ | low | > 59 |
| Kangiella aquimarina DSM 16071 | 0.36 | B158DRAFT_2344 | | 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) | 0.45 | B158DRAFT_2077 | | Predicted P-loop-containing kinase | low | > 40 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.36 | Xcc-8004.1562.1 | | 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) | 0.38 | Xcc-8004.1658.1 | | hypothetical protein | 0.45 | 36 |
| Marinobacter adhaerens HP15 | 0.36 | HP15_2405 | | 3'(2'), 5'-bisphosphate nucleotidase | 0.53 | HP15_2445 | | protein yhbJ | — | — |
| Rahnella sp. WP5 | 0.36 | EX31_RS08720 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.47 | EX31_RS12385 | | RNase adapter RapZ | low | > 89 |
| Alteromonas macleodii MIT1002 | 0.36 | MIT1002_01272 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.47 | MIT1002_00824 | | glmZ(sRNA)-inactivating NTPase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.35 | ABZR86_RS10205 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.44 | ABZR86_RS19800 | | RNase adapter RapZ | 0.82 | 29 |
| Enterobacter asburiae PDN3 | 0.35 | EX28DRAFT_3401 | | 3'(2'),5'-bisphosphate nucleotidase, bacterial | 0.47 | EX28DRAFT_3259 | | Predicted P-loop-containing kinase | low | > 76 |
| Enterobacter sp. TBS_079 | 0.35 | MPMX20_00492 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.47 | MPMX20_04111 | | RNase adapter protein RapZ | low | > 85 |
| Pantoea sp. MT58 | 0.35 | IAI47_02695 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.46 | IAI47_17200 | | RNase adapter RapZ | low | > 76 |
| Dickeya dadantii 3937 | 0.34 | DDA3937_RS17180 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.47 | DDA3937_RS01515 | | RNase adapter RapZ | low | > 74 |
| Vibrio cholerae E7946 ATCC 55056 | 0.34 | CSW01_13735 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.44 | CSW01_12830 | | RNase adaptor protein RapZ | low | > 62 |
| Serratia liquefaciens MT49 | 0.34 | IAI46_01745 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.47 | IAI46_22485 | | RNase adapter RapZ | low | > 86 |
| Dickeya dianthicola ME23 | 0.34 | DZA65_RS18320 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.47 | DZA65_RS01495 | | RNase adapter RapZ | low | > 75 |
| Erwinia tracheiphila SCR3 | 0.34 | LU632_RS02085 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.46 | LU632_RS21295 | rapZ | RNase adapter RapZ | low | > 74 |
| Escherichia coli ECRC62 | 0.34 | BNILDI_07225 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.47 | BNILDI_01810 | rapZ | RNase adapter RapZ | — | — |
| Escherichia coli ECOR27 | 0.34 | NOLOHH_04295 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.47 | NOLOHH_09725 | rapZ | RNase adapter RapZ | low | > 57 |
| Escherichia coli ECOR38 | 0.34 | HEPCGN_10230 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.47 | HEPCGN_16800 | rapZ | RNase adapter RapZ | low | > 85 |
| Escherichia fergusonii Becca | 0.34 | EFB2_04314 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.47 | EFB2_00618 | | RNase adapter protein RapZ | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.34 | OHPLBJKB_03819 | | '3'(2'),5'-bisphosphate nucleotidase CysQ' transl_table=11 | 0.47 | OHPLBJKB_00495 | | RNase adapter protein RapZ | low | > 73 |
| Escherichia coli Nissle 1917 | 0.34 | ECOLIN_RS24480 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.47 | ECOLIN_RS18440 | | RNase adapter RapZ | low | > 52 |
| Escherichia coli ECRC101 | 0.34 | MCAODC_02550 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.47 | MCAODC_08445 | rapZ | RNase adapter RapZ | — | — |
| Klebsiella michiganensis M5al | 0.34 | BWI76_RS02735 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.47 | BWI76_RS25280 | | RNase adaptor protein RapZ | low | > 92 |
| Escherichia coli ECRC99 | 0.34 | KEDOAH_16120 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.47 | KEDOAH_10225 | rapZ | RNase adapter RapZ | — | — |
| Dickeya dianthicola 67-19 | 0.34 | HGI48_RS17235 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.47 | HGI48_RS01430 | | RNase adapter RapZ | low | > 71 |
| Escherichia coli BW25113 | 0.34 | b4214 | cysQ | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase (NCBI) | 0.47 | b3205 | yhbJ | hypothetical protein (NCBI) | low | > 76 |
| Escherichia coli ECRC102 | 0.34 | NIAGMN_09885 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.47 | NIAGMN_15685 | rapZ | RNase adapter RapZ | — | — |
| Escherichia coli ECRC101 | 0.34 | OKFHMN_12035 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.47 | OKFHMN_17925 | rapZ | RNase adapter RapZ | — | — |
| Escherichia coli BL21 | 0.34 | ECD_04086 | | 3'(2'),5'-bisphosphate nucleotidase | 0.47 | ECD_03070 | | adaptor protein for GlmZ/GlmY sRNA decay, glucosamine-6-phosphate-regulated; NTPase | low | > 60 |
| Escherichia coli ECRC98 | 0.34 | JDDGAC_15675 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.47 | JDDGAC_21550 | rapZ | RNase adapter RapZ | — | — |
| Pectobacterium carotovorum WPP14 | 0.33 | HER17_RS03955 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.47 | HER17_RS20075 | | RNase adapter RapZ | 0.91 | 23 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.33 | GFF868 | | '3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7)' transl_table=11 | 0.46 | GFF2949 | | Hypothetical ATP-binding protein UPF0042, contains P-loop | low | > 78 |
| Azospirillum sp. SherDot2 | 0.33 | MPMX19_01084 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.34 | MPMX19_02622 | | Nucleotide-binding protein | low | > 112 |
| Magnetospirillum magneticum AMB-1 | 0.32 | AMB_RS18775 | | 3'(2'),5'-bisphosphate nucleotidase | 0.31 | AMB_RS22235 | | RNase adaptor protein RapZ | — | — |
| Dinoroseobacter shibae DFL-12 | 0.30 | Dshi_3574 | | 3'(2'),5'-bisphosphate nucleotidase (RefSeq) | 0.30 | Dshi_0209 | | hypothetical protein (RefSeq) | — | — |
| Phaeobacter inhibens DSM 17395 | 0.30 | PGA1_c34500 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.33 | PGA1_c01180 | | Predicted P-loop-containing kinase | — | — |
| Rhodospirillum rubrum S1H | 0.29 | Rru_A0445 | | 3(2),5 -bisphosphate nucleotidase (NCBI) | 0.34 | Rru_A3448 | | Uncharacterized P-loop ATPase protein UPF0042 (NCBI) | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.29 | DvMF_2027 | | inositol monophosphatase (RefSeq) | 0.32 | DvMF_0424 | | hypothetical protein (RefSeq) | low | > 51 |
| Acinetobacter radioresistens SK82 | 0.29 | MPMX26_01312 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.43 | MPMX26_00547 | | RNase adapter protein RapZ | — | — |
| Azospirillum brasilense Sp245 | 0.29 | AZOBR_RS09435 | | 3'-5'-bisphosphate nucleotidase | 0.32 | AZOBR_RS30485 | | nucleotide-binding protein | low | > 97 |
Not shown: 17 genomes with orthologs for Psest_3960 only; 22 genomes with orthologs for Psest_3316 only