Conservation of cofitness between HP15_3087 and HP15_2501 in Marinobacter adhaerens HP15

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_3087 protein belonging to uncharacterized protein family UPF0125 1.0 HP15_2501 DNA mismatch repair protein mutL 0.66 10
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_1181 UPF0125 protein yfjF 0.60 Pf1N1B4_1414 DNA mismatch repair protein MutL low > 87
Pseudomonas stutzeri RCH2 0.43 Psest_0959 Uncharacterized protein conserved in bacteria 0.61 Psest_0681 DNA mismatch repair protein MutL low > 67
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_5109 UPF0125 protein yfjF 0.59 PfGW456L13_156 DNA mismatch repair protein MutL low > 87
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_05675 protein RnfH 0.60 AO353_13135 DNA mismatch repair protein low > 101
Pseudomonas fluorescens FW300-N2C3 0.42 AO356_07525 protein RnfH 0.60 AO356_08665 DNA mismatch repair protein — —
Magnetospirillum magneticum AMB-1 0.41 AMB_RS13180 protein rnfH 0.25 AMB_RS22340 DNA mismatch repair protein MutL low > 64
Pseudomonas syringae pv. syringae B728a ΔmexB 0.41 Psyr_4200 Protein of unknown function UPF0125 0.59 Psyr_0570 DNA mismatch repair protein MutL low > 86
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS25925 RnfH family protein 0.61 PFLU_RS02560 DNA mismatch repair endonuclease MutL low > 109
Pseudomonas fluorescens SBW25 0.41 PFLU_RS25925 RnfH family protein 0.61 PFLU_RS02560 DNA mismatch repair endonuclease MutL low > 109
Pseudomonas syringae pv. syringae B728a 0.41 Psyr_4200 Protein of unknown function UPF0125 0.59 Psyr_0570 DNA mismatch repair protein MutL low > 86
Shewanella amazonensis SB2B 0.41 Sama_2386 hypothetical protein (RefSeq) 0.31 Sama_3027 mutL DNA mismatch repair protein (RefSeq) — —
Pseudomonas simiae WCS417 0.41 PS417_24085 protein RnfH 0.61 PS417_02480 DNA mismatch repair protein 0.18 26
Dyella japonica UNC79MFTsu3.2 0.38 ABZR86_RS05690 RnfH family protein 0.52 ABZR86_RS00855 DNA mismatch repair endonuclease MutL low > 74
Burkholderia phytofirmans PsJN 0.38 BPHYT_RS12030 protein RnfH 0.42 BPHYT_RS03650 DNA mismatch repair protein — —
Paraburkholderia graminis OAS925 0.38 ABIE53_002480 putative ubiquitin-RnfH superfamily antitoxin RatB of RatAB toxin-antitoxin module 0.43 ABIE53_000877 DNA mismatch repair protein MutL 0.23 3
Erwinia tracheiphila SCR3 0.38 LU632_RS17015 RnfH family protein 0.35 LU632_RS02045 mutL DNA mismatch repair endonuclease MutL low > 74
Shewanella sp. ANA-3 0.38 Shewana3_2950 hypothetical protein (RefSeq) 0.31 Shewana3_0595 mutL DNA mismatch repair protein (RefSeq) low > 73
Kangiella aquimarina DSM 16071 0.38 B158DRAFT_0971 Uncharacterized protein conserved in bacteria 0.30 B158DRAFT_1950 DNA mismatch repair protein MutL — —
Pseudomonas sp. S08-1 0.38 OH686_17035 UPF0125 protein RatB 0.61 OH686_09480 DNA mismatch repair protein MutL low > 80
Pseudomonas fluorescens FW300-N2E2 0.37 Pf6N2E2_3374 UPF0125 protein yfjF 0.61 Pf6N2E2_3616 DNA mismatch repair protein MutL — —
Shewanella oneidensis MR-1 0.37 SO1475 conserved hypothetical protein (NCBI ptt file) 0.30 SO0601 mutL DNA mismatch repair protein MutL (NCBI ptt file) low > 76
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_00632 hypothetical protein 0.44 H281DRAFT_04712 DNA mismatch repair protein MutL — —
Dechlorosoma suillum PS 0.37 Dsui_2673 hypothetical protein 0.45 Dsui_1551 DNA mismatch repair protein MutL low > 51
Pseudomonas sp. RS175 0.37 PFR28_00068 hypothetical protein 0.59 PFR28_05119 DNA mismatch repair protein MutL low > 88
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_04385 RnfH family protein 0.35 CSW01_01825 DNA mismatch repair protein MutL — —
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS06530 RnfH family protein 0.43 QEN71_RS26435 DNA mismatch repair endonuclease MutL — —
Dickeya dianthicola ME23 0.35 DZA65_RS04225 RnfH family protein 0.35 DZA65_RS19690 DNA mismatch repair endonuclease MutL low > 75
Dickeya dianthicola 67-19 0.35 HGI48_RS04310 RnfH family protein 0.35 HGI48_RS18555 DNA mismatch repair endonuclease MutL — —
Acinetobacter radioresistens SK82 0.35 MPMX26_02409 hypothetical protein 0.39 MPMX26_01207 DNA mismatch repair protein MutL low > 36
Herbaspirillum seropedicae SmR1 0.35 HSERO_RS11010 RnfH 0.43 HSERO_RS04190 DNA mismatch repair protein low > 78
Dickeya dadantii 3937 0.35 DDA3937_RS04315 RnfH family protein 0.35 DDA3937_RS18620 DNA mismatch repair endonuclease MutL low > 74
Pectobacterium carotovorum WPP14 0.35 HER17_RS17430 RnfH family protein 0.34 HER17_RS02575 DNA mismatch repair endonuclease MutL low > 75
Rahnella sp. WP5 0.34 EX31_RS21750 RnfH family protein 0.33 EX31_RS08830 DNA mismatch repair endonuclease MutL low > 89
Enterobacter asburiae PDN3 0.34 EX28DRAFT_2721 Uncharacterized protein conserved in bacteria 0.34 EX28DRAFT_3367 DNA mismatch repair protein MutL low > 76
Escherichia coli BW25113 0.33 b2618 b2618 orf, hypothetical protein (VIMSS) 0.34 b4170 mutL DNA mismatch repair protein (NCBI) low > 76
Escherichia coli BL21 0.33 ECD_02506 UPF0125 family protein 0.34 ECD_04037 methyl-directed mismatch repair protein low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_01089 hypothetical protein 0.34 OHPLBJKB_03872 DNA mismatch repair protein MutL low > 73
Escherichia coli ECRC62 0.33 BNILDI_11610 rnfH RnfH family protein 0.34 BNILDI_06960 mutL DNA mismatch repair endonuclease MutL — —
Escherichia coli ECOR27 0.33 NOLOHH_12805 rnfH RnfH family protein 0.34 NOLOHH_04530 mutL DNA mismatch repair endonuclease MutL — —
Escherichia coli ECOR38 0.33 HEPCGN_20255 rnfH RnfH family protein 0.34 HEPCGN_10495 mutL DNA mismatch repair endonuclease MutL low > 85
Escherichia coli ECRC102 0.33 NIAGMN_18905 rnfH RnfH family protein 0.34 NIAGMN_10115 mutL DNA mismatch repair endonuclease MutL — —
Escherichia coli ECRC101 0.33 MCAODC_11660 rnfH RnfH family protein 0.34 MCAODC_02780 mutL DNA mismatch repair endonuclease MutL — —
Escherichia coli ECRC99 0.33 KEDOAH_07085 rnfH RnfH family protein 0.34 KEDOAH_15890 mutL DNA mismatch repair endonuclease MutL — —
Castellaniella sp019104865 MT123 0.33 ABCV34_RS04000 RnfH family protein 0.40 ABCV34_RS08785 DNA mismatch repair endonuclease MutL low > 48
Escherichia coli ECRC98 0.33 JDDGAC_24800 rnfH RnfH family protein 0.34 JDDGAC_15905 mutL DNA mismatch repair endonuclease MutL — —
Escherichia coli ECRC101 0.33 OKFHMN_21135 rnfH RnfH family protein 0.34 OKFHMN_12265 mutL DNA mismatch repair endonuclease MutL — —
Escherichia fergusonii Becca 0.33 EFB2_01275 Persistence and stress-resistance antitoxin PasI 0.35 EFB2_04365 DNA mismatch repair protein MutL low > 86
Escherichia coli Nissle 1917 0.33 ECOLIN_RS14785 RnfH family protein 0.35 ECOLIN_RS24220 DNA mismatch repair endonuclease MutL low > 52
Enterobacter sp. TBS_079 0.32 MPMX20_03488 Persistence and stress-resistance antitoxin PasI 0.34 MPMX20_00451 DNA mismatch repair protein MutL low > 85
Serratia liquefaciens MT49 0.32 IAI46_19645 RnfH family protein 0.34 IAI46_01615 DNA mismatch repair endonuclease MutL low > 86
Rhodanobacter sp. FW510-T8 0.32 OKGIIK_07365 RnfH family protein 0.50 OKGIIK_03920 mutL DNA mismatch repair endonuclease MutL low > 52
Pantoea sp. MT58 0.31 IAI47_04800 RnfH family protein 0.34 IAI47_02580 DNA mismatch repair endonuclease MutL low > 76
Klebsiella michiganensis M5al 0.31 BWI76_RS21570 RnfH family protein 0.33 BWI76_RS02525 DNA mismatch repair protein MutL low > 92
Lysobacter sp. OAE881 0.30 ABIE51_RS11670 RnfH family protein 0.49 ABIE51_RS08065 DNA mismatch repair endonuclease MutL low > 62
Xanthomonas campestris pv. campestris strain 8004 0.29 Xcc-8004.3435.1 UPF0125 protein yfjF 0.50 Xcc-8004.2256.1 DNA mismatch repair protein MutL — —
Rhodanobacter denitrificans MT42 0.28 LRK55_RS17790 RnfH family protein 0.51 LRK55_RS14865 DNA mismatch repair endonuclease MutL low > 63
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS17935 RnfH family protein 0.50 LRK54_RS15150 DNA mismatch repair endonuclease MutL low > 59

Not shown: 1 genomes with orthologs for HP15_3087 only; 37 genomes with orthologs for HP15_2501 only