| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Phaeobacter inhibens DSM 17395 | 1.0 | PGA1_c30170 | | ABC transporter permease protein | 1.0 | PGA1_c23690 | | protease do | 0.60 | 5 |
| Dinoroseobacter shibae DFL-12 | 0.78 | Dshi_0656 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | 0.62 | Dshi_2733 | | protease Do (RefSeq) | 0.40 | 17 |
| Pseudomonas putida KT2440 | 0.68 | PP_4148 | | putative inner membrane ABC transporter permease protein | 0.30 | PP_1430 | | putative periplasmic serine endoprotease DegP-like | low | > 96 |
| Marinobacter adhaerens HP15 | 0.68 | HP15_1808 | | peptide ABC transporter, permease protein | 0.30 | HP15_779 | | serine protease MucD precursor | low | > 73 |
| Agrobacterium fabrum C58 | 0.68 | Atu0188 | | ABC transporter, membrane spanning protein (peptide) | 0.40 | Atu2043 | | htrA family protein | low | > 89 |
| Pseudomonas syringae pv. syringae B728a | 0.68 | Psyr_1757 | | Binding-protein-dependent transport systems inner membrane component | 0.29 | Psyr_3955 | | Peptidase S1, chymotrypsin:PDZ/DHR/GLGF | 0.39 | 64 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.68 | Psyr_1757 | | Binding-protein-dependent transport systems inner membrane component | 0.29 | Psyr_3955 | | Peptidase S1, chymotrypsin:PDZ/DHR/GLGF | low | > 86 |
| Pseudomonas stutzeri RCH2 | 0.68 | Psest_2066 | | ABC-type uncharacterized transport system, permease component | 0.29 | Psest_3096 | | periplasmic serine protease, Do/DeqQ family | — | — |
| Pseudomonas sp. RS175 | 0.68 | PFR28_01548 | | Inner membrane ABC transporter permease protein YejB | 0.28 | PFR28_00693 | | Periplasmic serine endoprotease DegP | low | > 88 |
| Pseudomonas sp. S08-1 | 0.67 | OH686_03605 | | ABC transporter premease protein | 0.29 | OH686_20060 | | HtrA protease/chaperone protein | low | > 80 |
| Pseudomonas fluorescens FW300-N2E3 | 0.67 | AO353_23470 | | microcin ABC transporter permease | 0.27 | AO353_17640 | | serine peptidase | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.67 | Pf6N2E2_583 | | Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) | 0.28 | Pf6N2E2_2753 | | HtrA protease/chaperone protein | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.67 | AO356_24460 | | microcin ABC transporter permease | 0.28 | AO356_04560 | | serine peptidase | low | > 104 |
| Pseudomonas fluorescens GW456-L13 | 0.67 | PfGW456L13_3344 | | Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) | 0.28 | PfGW456L13_4513 | | HtrA protease/chaperone protein | low | > 87 |
| Rhodopseudomonas palustris CGA009 | 0.67 | TX73_019120 | | microcin C ABC transporter permease YejB | 0.41 | TX73_018065 | | Do family serine endopeptidase | low | > 86 |
| Sinorhizobium meliloti 1021 | 0.67 | SMc02831 | | ABC transporter permease | 0.39 | SMc01438 | | protease precursor signal peptide protein | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.67 | PFLU_RS12890 | | microcin C ABC transporter permease YejB | 0.28 | PFLU_RS07245 | | DegQ family serine endoprotease | 0.33 | 34 |
| Pseudomonas fluorescens SBW25 | 0.67 | PFLU_RS12890 | | microcin C ABC transporter permease YejB | 0.28 | PFLU_RS07245 | | DegQ family serine endoprotease | low | > 109 |
| Pseudomonas simiae WCS417 | 0.67 | PS417_12200 | | microcin ABC transporter permease | 0.28 | PS417_07135 | | serine peptidase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.66 | Pf1N1B4_4592 | | Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) | 0.28 | Pf1N1B4_3326 | | HtrA protease/chaperone protein | — | — |
| Bosea sp. OAE506 | 0.66 | ABIE41_RS23965 | | microcin C ABC transporter permease YejB | 0.40 | ABIE41_RS12865 | | DegQ family serine endoprotease | 0.57 | 25 |
| Azospirillum sp. SherDot2 | 0.66 | MPMX19_02169 | | Inner membrane ABC transporter permease protein YejB | 0.39 | MPMX19_01249 | | Periplasmic serine endoprotease DegP | low | > 112 |
| Rhizobium sp. OAE497 | 0.65 | ABIE40_RS00620 | | microcin C ABC transporter permease YejB | 0.38 | ABIE40_RS11520 | | DegQ family serine endoprotease | low | > 107 |
| Azospirillum brasilense Sp245 | 0.65 | AZOBR_RS03820 | | microcin C ABC transporter permease YejB | 0.40 | AZOBR_RS06535 | | serine protease | — | — |
| Escherichia coli ECRC98 | 0.64 | JDDGAC_27345 | yejB | Inner membrane ABC transporter permease protein YejB | 0.26 | JDDGAC_13850 | degP | serine endoprotease DegP | — | — |
| Escherichia coli ECRC102 | 0.64 | NIAGMN_21150 | yejB | Inner membrane ABC transporter permease protein YejB | 0.26 | NIAGMN_08105 | degP | serine endoprotease DegP | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.64 | OHPLBJKB_01531 | | Inner membrane ABC transporter permease protein YejB | 0.26 | OHPLBJKB_03501 | | Periplasmic serine endoprotease DegP | low | > 73 |
| Escherichia coli ECRC101 | 0.64 | OKFHMN_23385 | yejB | Inner membrane ABC transporter permease protein YejB | 0.26 | OKFHMN_10255 | degP | serine endoprotease DegP | — | — |
| Escherichia coli ECRC101 | 0.64 | MCAODC_14435 | yejB | Inner membrane ABC transporter permease protein YejB | 0.26 | MCAODC_00770 | degP | serine endoprotease DegP | — | — |
| Escherichia coli ECRC99 | 0.64 | KEDOAH_04800 | yejB | Inner membrane ABC transporter permease protein YejB | 0.26 | KEDOAH_17900 | degP | serine endoprotease DegP | — | — |
| Escherichia coli ECRC62 | 0.64 | BNILDI_13880 | yejB | Inner membrane ABC transporter permease protein YejB | 0.26 | BNILDI_09070 | degP | serine endoprotease DegP | — | — |
| Escherichia coli ECOR27 | 0.64 | NOLOHH_14960 | yejB | Inner membrane ABC transporter permease protein YejB | 0.26 | NOLOHH_02600 | degP | serine endoprotease DegP | — | — |
| Escherichia fergusonii Becca | 0.64 | EFB2_01678 | | Inner membrane ABC transporter permease protein YejB | 0.26 | EFB2_03883 | | Periplasmic serine endoprotease DegP | low | > 86 |
| Escherichia coli ECOR38 | 0.64 | HEPCGN_22650 | yejB | Inner membrane ABC transporter permease protein YejB | 0.26 | HEPCGN_08205 | degP | serine endoprotease DegP | low | > 85 |
| Escherichia coli BL21 | 0.64 | ECD_02108 | | microcin C ABC transporter permease | 0.26 | ECD_00160 | | serine endoprotease (protease Do), membrane-associated | low | > 60 |
| Serratia liquefaciens MT49 | 0.64 | IAI46_17320 | | microcin C ABC transporter permease YejB | 0.25 | IAI46_03585 | | serine endoprotease DegP | low | > 86 |
| Escherichia coli BW25113 | 0.64 | b2178 | yejB | predicted oligopeptide transporter subunit (NCBI) | 0.26 | b0161 | degP | serine endoprotease (protease Do), membrane-associated (NCBI) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.64 | ECOLIN_RS12735 | | microcin C ABC transporter permease YejB | 0.26 | ECOLIN_RS00895 | | serine endoprotease DegP | low | > 52 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.63 | GFF3758 | | Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) | 0.26 | GFF60 | | HtrA protease/chaperone protein | low | > 78 |
| Pectobacterium carotovorum WPP14 | 0.63 | HER17_RS12925 | | microcin C ABC transporter permease YejB | 0.26 | HER17_RS05660 | | serine endoprotease DegP | low | > 75 |
| Vibrio cholerae E7946 ATCC 55056 | 0.63 | CSW01_17180 | | peptide ABC transporter permease | 0.26 | CSW01_03020 | | serine endoprotease DegQ | low | > 62 |
| Dickeya dianthicola 67-19 | 0.62 | HGI48_RS09225 | | microcin C ABC transporter permease YejB | 0.27 | HGI48_RS16000 | | serine endoprotease DegP | low | > 71 |
| Enterobacter asburiae PDN3 | 0.62 | EX28DRAFT_0383 | | ABC-type uncharacterized transport system, permease component | 0.26 | EX28DRAFT_3750 | | periplasmic serine protease, Do/DeqQ family | low | > 76 |
| Enterobacter sp. TBS_079 | 0.61 | MPMX20_03144 | | Inner membrane ABC transporter permease protein YejB | 0.26 | MPMX20_00847 | | Periplasmic serine endoprotease DegP | low | > 85 |
| Dickeya dadantii 3937 | 0.61 | DDA3937_RS09185 | | microcin C ABC transporter permease YejB | 0.27 | DDA3937_RS15860 | | serine endoprotease DegP | 0.50 | 50 |
| Dickeya dianthicola ME23 | 0.61 | DZA65_RS09530 | | microcin C ABC transporter permease YejB | 0.26 | DZA65_RS17085 | | serine endoprotease DegP | low | > 75 |
| Pantoea sp. MT58 | 0.61 | IAI47_06610 | | microcin C ABC transporter permease YejB | 0.24 | IAI47_17260 | | serine endoprotease DegQ | low | > 76 |
| Magnetospirillum magneticum AMB-1 | 0.61 | AMB_RS22195 | | microcin C ABC transporter permease YejB | 0.39 | AMB_RS17665 | | PDZ domain-containing protein | — | — |
| Erwinia tracheiphila SCR3 | 0.61 | LU632_RS17570 | | microcin C ABC transporter permease YejB | 0.24 | LU632_RS21355 | | Do family serine endopeptidase | low | > 74 |
| Herbaspirillum seropedicae SmR1 | 0.60 | HSERO_RS17140 | | ABC transporter permease | 0.25 | HSERO_RS09640 | | peptidase | low | > 78 |
| Rhodospirillum rubrum S1H | 0.58 | Rru_A3167 | | Binding-protein-dependent transport systems inner membrane component (NCBI) | 0.39 | Rru_A2201 | | Peptidase S1C, Do (NCBI) | low | > 58 |
| Acidovorax sp. GW101-3H11 | 0.58 | Ac3H11_2910 | | Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) | 0.25 | Ac3H11_1570 | | HtrA protease/chaperone protein | — | — |
| Variovorax sp. OAS795 | 0.58 | ABID97_RS16515 | | ABC transporter permease subunit | 0.23 | ABID97_RS08345 | | DegQ family serine endoprotease | low | > 91 |
| Ralstonia solanacearum UW163 | 0.56 | UW163_RS12510 | | microcin C ABC transporter permease YejB | 0.26 | UW163_RS11925 | | peptidase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.56 | RR42_RS13380 | | microcin ABC transporter permease | 0.26 | RR42_RS14065 | | serine peptidase | low | > 128 |
| Ralstonia solanacearum IBSBF1503 | 0.56 | RALBFv3_RS15040 | | microcin C ABC transporter permease YejB | 0.26 | RALBFv3_RS14460 | | peptidase | low | > 76 |
| Paraburkholderia sabiae LMG 24235 | 0.56 | QEN71_RS06175 | | ABC transporter permease subunit | 0.26 | QEN71_RS04590 | | DegQ family serine endoprotease | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.56 | BPHYT_RS07160 | | ABC transporter permease | 0.26 | BPHYT_RS14390 | | peptidase | low | > 109 |
| Ralstonia solanacearum GMI1000 | 0.56 | RS_RS05855 | | microcin C ABC transporter permease YejB | 0.26 | RS_RS05240 | | PDZ domain-containing protein | low | > 80 |
| Paraburkholderia graminis OAS925 | 0.56 | ABIE53_006374 | | microcin C transport system permease protein | 0.26 | ABIE53_003040 | | serine protease Do | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.56 | H281DRAFT_04901 | | microcin C transport system permease protein | 0.26 | H281DRAFT_04358 | | serine protease Do | low | > 103 |
| Acinetobacter radioresistens SK82 | 0.55 | MPMX26_02272 | | Inner membrane ABC transporter permease protein YejB | 0.23 | MPMX26_02161 | | Periplasmic pH-dependent serine endoprotease DegQ | low | > 36 |
| Ralstonia sp. UNC404CL21Col | 0.55 | ABZR87_RS10685 | | microcin C ABC transporter permease YejB | 0.26 | ABZR87_RS10180 | | DegQ family serine endoprotease | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.55 | RPSI07_RS18335 | | microcin C ABC transporter permease YejB | 0.25 | RPSI07_RS19000 | | PDZ domain-containing protein | low | > 81 |
| Variovorax sp. SCN45 | 0.54 | GFF228 | | ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) | 0.26 | GFF3866 | | HtrA protease/chaperone protein | low | > 127 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.52 | DVU2385 | | ABC transporter, permease protein (TIGR) | 0.31 | DVU1468 | htrA | peptidase/PDZ domain protein (TIGR) | low | > 55 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.51 | GFF4336 | | Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) | 0.25 | GFF3342 | | HtrA protease/chaperone protein | — | — |
Not shown: 2 genomes with orthologs for PGA1_c30170 only; 20 genomes with orthologs for PGA1_c23690 only