Conservation of cofitness between Psest_1510 and Psest_2139 in Pseudomonas stutzeri RCH2

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_1510 Putative Zn-dependent protease, contains TPR repeats 1.0 Psest_2139 Cation/multidrug efflux pump 0.40 9
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_1543 Peptidase M48, Ste24p 0.76 Psyr_2483 Acriflavin resistance protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_1543 Peptidase M48, Ste24p 0.76 Psyr_2483 Acriflavin resistance protein 0.42 67
Pseudomonas sp. S08-1 0.73 OH686_19195 Exported zinc metalloprotease YfgC precursor 0.78 OH686_00925 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtB (RND type) low > 80
Pseudomonas putida KT2440 0.72 PP_1232 conserved exported protein of unknown function 0.77 PP_3584 multidrug efflux transport system - membrane subunit low > 96
Pseudomonas sp. BP01 0.72 JOY50_RS01735 M48 family metalloprotease 0.77 JOY50_RS07350 MdtB/MuxB family multidrug efflux RND transporter permease subunit low > 84
Pseudomonas sp. SVBP6 0.70 COO64_RS20220 M48 family metalloprotease 0.79 COO64_RS14565 MdtB/MuxB family multidrug efflux RND transporter permease subunit low > 93
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_04555 peptidase M48 0.78 AO356_25875 multidrug transporter low > 104
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_2752 Exported zinc metalloprotease YfgC precursor 0.78 Pf6N2E2_1272 Acriflavin resistance plasma membrane protein low > 103
Pseudomonas sp. RS175 0.69 PFR28_00694 Beta-barrel assembly-enhancing protease 0.78 PFR28_02194 Multidrug resistance protein MdtB low > 88
Pseudomonas fluorescens GW456-L13 0.69 PfGW456L13_4512 Exported zinc metalloprotease YfgC precursor 0.78 PfGW456L13_3266 Acriflavin resistance plasma membrane protein low > 87
Pseudomonas fluorescens FW300-N1B4 0.68 Pf1N1B4_3327 Exported zinc metalloprotease YfgC precursor 0.77 Pf1N1B4_4665 Acriflavin resistance plasma membrane protein — —
Pseudomonas sp. DMC3 0.67 GFF2281 Beta-barrel assembly-enhancing protease 0.78 GFF3507 Multidrug resistance protein MdtB low > 89
Pseudomonas lactucae CFBP13502 0.67 GEMAOFIL_01576 Beta-barrel assembly-enhancing protease 0.77 GEMAOFIL_02797 Multidrug resistance protein MdtB low > 93
Pseudomonas simiae WCS417 0.66 PS417_07140 peptidase M48 0.77 PS417_12745 multidrug transporter 0.25 49
Pseudomonas fluorescens SBW25 0.66 PFLU_RS07250 M48 family metallopeptidase 0.77 PFLU_RS13430 MdtB/MuxB family multidrug efflux RND transporter permease subunit low > 109
Pseudomonas fluorescens SBW25-INTG 0.66 PFLU_RS07250 M48 family metallopeptidase 0.77 PFLU_RS13430 MdtB/MuxB family multidrug efflux RND transporter permease subunit low > 109
Pseudomonas aeruginosa PA14 0.66 IKLFDK_04560 peptidase M48 0.68 IKLFDK_12420 multidrug efflux RND transporter permease subunit MuxB low > 100
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_17645 peptidase M48 0.79 AO353_22895 multidrug transporter low > 101
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.24 GFF2175 Exported zinc metalloprotease YfgC precursor 0.61 GFF3854 Multidrug transporter MdtB low > 78
Enterobacter asburiae PDN3 0.23 EX28DRAFT_0178 Putative Zn-dependent protease, contains TPR repeats 0.62 EX28DRAFT_0483 Cation/multidrug efflux pump low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_01232 Beta-barrel assembly-enhancing protease 0.61 OHPLBJKB_01629 Multidrug resistance protein MdtB low > 74
Escherichia coli BW25113 0.23 b2494 yfgC predicted peptidase (NCBI) 0.61 b2075 mdtB multidrug efflux system, subunit B (NCBI) low > 76
Escherichia coli ECRC101 0.23 MCAODC_12365 bepA beta-barrel assembly-enhancing protease 0.61 MCAODC_20745 mdtB multidrug efflux RND transporter permease subunit MdtB low > 88
Escherichia coli ECRC102 0.23 NIAGMN_19605 bepA beta-barrel assembly-enhancing protease 0.61 NIAGMN_22140 mdtB multidrug efflux RND transporter permease subunit MdtB low > 80
Escherichia coli ECRC98 0.23 JDDGAC_25780 bepA beta-barrel assembly-enhancing protease 0.61 JDDGAC_28305 mdtB multidrug efflux RND transporter permease subunit MdtB low > 87
Escherichia coli BL21 0.23 ECD_02386 OM protein maintenance and assembly metalloprotease and chaperone, periplasmic 0.61 ECD_01980 multidrug efflux system, subunit B — —
Escherichia coli ECOR27 0.23 NOLOHH_13485 bepA beta-barrel assembly-enhancing protease 0.61 NOLOHH_15540 mdtB multidrug efflux RND transporter permease subunit MdtB low > 76
Escherichia coli ECRC99 0.23 KEDOAH_06385 bepA beta-barrel assembly-enhancing protease 0.61 KEDOAH_03955 mdtB multidrug efflux RND transporter permease subunit MdtB — —
Escherichia coli ECRC100 0.23 OKFHMN_21835 bepA beta-barrel assembly-enhancing protease 0.61 OKFHMN_24195 mdtB multidrug efflux RND transporter permease subunit MdtB low > 79
Escherichia coli ECRC62 0.23 BNILDI_12295 bepA beta-barrel assembly-enhancing protease 0.61 BNILDI_14455 mdtB multidrug efflux RND transporter permease subunit MdtB low > 75
Escherichia coli ECOR38 0.23 HEPCGN_21000 bepA beta-barrel assembly-enhancing protease 0.61 HEPCGN_02885 mdtB multidrug efflux RND transporter permease subunit MdtB low > 88
Dickeya dadantii 3937 0.23 DDA3937_RS06050 M48 family metallopeptidase 0.61 DDA3937_RS15265 MdtB/MuxB family multidrug efflux RND transporter permease subunit low > 74
Enterobacter sp. TBS_079 0.23 MPMX20_03344 Beta-barrel assembly-enhancing protease 0.62 MPMX20_03061 Multidrug resistance protein MdtB low > 85
Erwinia tracheiphila HP pepo 2.2 0.23 IJEDHG_18400 Beta-barrel assembly-enhancing protease 0.62 IJEDHG_18800 multidrug transporter subunit MdtC low > 61
Erwinia tracheiphila SCR3 0.23 LU632_RS08305 M48 family metallopeptidase 0.62 LU632_RS08690 MdtB/MuxB family multidrug efflux RND transporter permease subunit low > 74
Escherichia coli Nissle 1917 0.23 ECOLIN_RS14165 beta-barrel assembly-enhancing protease 0.61 ECOLIN_RS12200 multidrug efflux RND transporter permease subunit MdtB low > 55
Escherichia fergusonii Becca 0.23 EFB2_01404 Beta-barrel assembly-enhancing protease 0.61 EFB2_01780 Multidrug resistance protein MdtB low > 86
Klebsiella michiganensis M5al 0.23 BWI76_RS20925 peptidase M48 0.62 BWI76_RS19255 multidrug transporter subunit MdtB low > 92
Dickeya dianthicola 67-19 0.23 HGI48_RS06095 M48 family metallopeptidase 0.61 HGI48_RS15345 MdtB/MuxB family multidrug efflux RND transporter permease subunit low > 71
Dickeya dianthicola ME23 0.23 DZA65_RS06445 M48 family metallopeptidase 0.62 DZA65_RS16165 MdtB/MuxB family multidrug efflux RND transporter permease subunit low > 75
Klebsiella pneumoniae MKP103 0.23 KDGMDA_27765 beta-barrel assembly-enhancing protease 0.61 KDGMDA_26305 MdtB/MuxB family multidrug efflux RND transporter permease subunit low > 95
Rahnella sp. WP5 0.23 EX31_RS22720 M48 family metallopeptidase 0.63 EX31_RS13380 MMPL family transporter low > 89
Erwinia amylovora T8 0.23 OLJFJH_10615 Beta-barrel assembly-enhancing protease 0.60 OLJFJH_08990 multidrug transporter subunit MdtC low > 58
Serratia liquefaciens MT49 0.22 IAI46_18840 M48 family metallopeptidase 0.62 IAI46_18975 MdtB/MuxB family multidrug efflux RND transporter permease subunit low > 86
Pantoea agglomerans CFBP13505 P0401 0.22 PagCFBP13505_RS15095 M48 family metallopeptidase 0.61 PagCFBP13505_RS08990 multidrug transporter subunit MdtC low > 74
Pantoea sp. MT58 0.22 IAI47_05205 M48 family metallopeptidase 0.61 IAI47_16895 efflux RND transporter permease subunit low > 76
Pectobacterium carotovorum WPP14 0.21 HER17_RS15440 M48 family metallopeptidase 0.63 HER17_RS06320 MdtB/MuxB family multidrug efflux RND transporter permease subunit low > 75
Ralstonia solanacearum PSI07 0.21 RPSI07_RS21205 peptidase M48 0.68 RPSI07_RS05515 multidrug transporter subunit MdtB low > 81
Ralstonia solanacearum GMI1000 0.21 RS_RS02810 peptidase M48 0.68 RS_RS22915 multidrug transporter subunit MdtB low > 80
Herbaspirillum seropedicae SmR1 0.21 HSERO_RS03305 peptidase M48 0.69 HSERO_RS07650 multidrug transporter low > 78
Ralstonia solanacearum UW163 0.21 UW163_RS01485 peptidase M48 0.68 UW163_RS21010 multidrug transporter subunit MdtB — —
Ralstonia solanacearum IBSBF1503 0.21 RALBFv3_RS12125 peptidase M48 0.68 RALBFv3_RS18120 multidrug transporter subunit MdtB low > 76
Methylophilus sp. DMC18 0.21 GFF2283 Beta-barrel assembly-enhancing protease 0.59 GFF2675 Multidrug resistance protein MdtB low > 43
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS16315 peptidase M48 Ste24p 0.60 BPHYT_RS07785 multidrug transporter low > 109
Ralstonia sp. UNC404CL21Col 0.20 ABZR87_RS08020 M48 family metalloprotease 0.68 ABZR87_RS19025 MdtB/MuxB family multidrug efflux RND transporter permease subunit low > 80
Xanthomonas campestris pv. campestris strain 8004 0.20 Xcc-8004.4060.1 Exported zinc metalloprotease YfgC precursor 0.50 Xcc-8004.4792.1 Acriflavin resistance protein low > 74
Paraburkholderia sabiae LMG 24235 0.20 QEN71_RS02380 M48 family metalloprotease 0.61 QEN71_RS23305 MdtB/MuxB family multidrug efflux RND transporter permease subunit low > 153
Rhodanobacter sp000427505 FW510-R12 0.20 LRK53_RS13580 M48 family metalloprotease 0.52 LRK53_RS02595 efflux RND transporter permease subunit low > 59
Rhodanobacter denitrificans FW104-10B01 0.19 LRK54_RS15035 M48 family metalloprotease 0.51 LRK54_RS09845 efflux RND transporter permease subunit low > 59
Rhodanobacter denitrificans MT42 0.19 LRK55_RS14750 M48 family metalloprotease 0.52 LRK55_RS09505 efflux RND transporter permease subunit 0.91 23
Castellaniella sp019104865 MT123 0.19 ABCV34_RS07945 M48 family metalloprotease 0.60 ABCV34_RS14620 multidrug efflux RND transporter permease subunit low > 48
Dyella japonica UNC79MFTsu3.2 0.18 ABZR86_RS00725 M48 family metalloprotease 0.51 ABZR86_RS16320 efflux RND transporter permease subunit low > 74
Rhodanobacter sp. FW510-T8 0.18 OKGIIK_03795 Putative beta-barrel assembly-enhancing protease 0.51 OKGIIK_16105 acrB Multidrug efflux pump subunit AcrB low > 52
Acinetobacter radioresistens SK82 0.17 MPMX26_01126 Beta-barrel assembly-enhancing protease 0.24 MPMX26_02516 Multidrug resistance protein MdtC — —
Acinetobacter baumannii LAC-4 0.16 RR41_RS06370 M48 family metalloprotease 0.24 RR41_RS03390 efflux RND transporter permease subunit low > 55
Desulfovibrio vulgaris Hildenborough JW710 0.15 DVU1578 TPR domain protein (TIGR) 0.47 DVU0438 AcrB/AcrD/AcrF family protein (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.13 DvMF_0483 peptidase M48 Ste24p (RefSeq) 0.45 DvMF_1515 acriflavin resistance protein (RefSeq) low > 51
Acidovorax sp. GW101-3H11 0.12 Ac3H11_1239 Peptidase M48, Ste24p precursor 0.63 Ac3H11_3618 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA 0.32 39

Not shown: 11 genomes with orthologs for Psest_1510 only; 14 genomes with orthologs for Psest_2139 only