Conservation of cofitness between Psest_1849 and Psest_2066 in Pseudomonas stutzeri RCH2

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_1849 Predicted glutamine amidotransferase 1.0 Psest_2066 ABC-type uncharacterized transport system, permease component 0.46 2
Pseudomonas fluorescens GW456-L13 0.80 PfGW456L13_4482 Glutamine amidotransferase, class-II 0.90 PfGW456L13_3344 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) low > 87
Pseudomonas fluorescens FW300-N2E3 0.80 AO353_17960 glutamine amidotransferase 0.89 AO353_23470 microcin ABC transporter permease low > 101
Pseudomonas simiae WCS417 0.80 PS417_07455 glutamine amidotransferase 0.89 PS417_12200 microcin ABC transporter permease low > 88
Pseudomonas fluorescens SBW25-INTG 0.79 PFLU_RS07540 class II glutamine amidotransferase 0.89 PFLU_RS12890 microcin C ABC transporter permease YejB low > 109
Pseudomonas fluorescens SBW25 0.79 PFLU_RS07540 class II glutamine amidotransferase 0.89 PFLU_RS12890 microcin C ABC transporter permease YejB low > 109
Pseudomonas fluorescens FW300-N1B4 0.79 Pf1N1B4_3359 Glutamine amidotransferase, class-II 0.89 Pf1N1B4_4592 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
Pseudomonas fluorescens FW300-N2C3 0.79 AO356_04350 glutamine amidotransferase 0.91 AO356_24460 microcin ABC transporter permease 0.32 26
Pseudomonas fluorescens FW300-N2E2 0.79 Pf6N2E2_2711 Glutamine amidotransferase, class-II 0.91 Pf6N2E2_583 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) low > 103
Pseudomonas sp. RS175 0.79 PFR28_00725 Putative glutamine amidotransferase YafJ 0.90 PFR28_01548 Inner membrane ABC transporter permease protein YejB low > 88
Pseudomonas syringae pv. syringae B728a 0.78 Psyr_1576 Glutamine amidotransferase, class-II 0.88 Psyr_1757 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.78 Psyr_1576 Glutamine amidotransferase, class-II 0.88 Psyr_1757 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas sp. S08-1 0.77 OH686_05255 Putative glutamine amidotransferase YafJ 0.83 OH686_03605 ABC transporter premease protein low > 80
Pseudomonas putida KT2440 0.74 PP_4581 putative amidotransferase 0.90 PP_4148 putative inner membrane ABC transporter permease protein low > 96
Marinobacter adhaerens HP15 0.63 HP15_3871 glutamine amidotransferase class-II 0.73 HP15_1808 peptide ABC transporter, permease protein low > 73
Shewanella oneidensis MR-1 0.57 SO2535 hypothetical amidotransferase (NCBI ptt file) 0.11 SO1804 sapB peptide ABC transporter, permease protein (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.56 CSW01_11360 class II glutamine amidotransferase 0.68 CSW01_17180 peptide ABC transporter permease low > 62
Shewanella loihica PV-4 0.56 Shew_2107 glutamine amidotransferase, class-II (RefSeq) 0.11 Shew_2499 binding-protein-dependent transport systems inner membrane component (RefSeq)
Enterobacter sp. TBS_079 0.56 MPMX20_00912 Putative glutamine amidotransferase YafJ 0.65 MPMX20_03144 Inner membrane ABC transporter permease protein YejB low > 85
Pantoea sp. MT58 0.55 IAI47_15185 class II glutamine amidotransferase 0.67 IAI47_06610 microcin C ABC transporter permease YejB low > 76
Enterobacter asburiae PDN3 0.55 EX28DRAFT_2666 Predicted glutamine amidotransferase 0.65 EX28DRAFT_0383 ABC-type uncharacterized transport system, permease component low > 76
Erwinia tracheiphila SCR3 0.55 LU632_RS01140 class II glutamine amidotransferase 0.67 LU632_RS17570 microcin C ABC transporter permease YejB low > 74
Azospirillum sp. SherDot2 0.55 MPMX19_00595 Putative glutamine amidotransferase YafJ 0.72 MPMX19_02169 Inner membrane ABC transporter permease protein YejB low > 112
Escherichia coli Nissle 1917 0.55 ECOLIN_RS01755 class II glutamine amidotransferase 0.66 ECOLIN_RS12735 microcin C ABC transporter permease YejB low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF4102 Predicted glutamine amidotransferase 0.66 GFF3758 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) low > 78
Escherichia coli ECOR27 0.55 NOLOHH_02140 yafJ Putative glutamine amidotransferase YafJ 0.66 NOLOHH_14960 yejB Inner membrane ABC transporter permease protein YejB
Escherichia fergusonii Becca 0.55 EFB2_03794 Putative glutamine amidotransferase YafJ 0.66 EFB2_01678 Inner membrane ABC transporter permease protein YejB low > 86
Escherichia coli ECOR38 0.55 HEPCGN_07875 yafJ Putative glutamine amidotransferase YafJ 0.66 HEPCGN_22650 yejB Inner membrane ABC transporter permease protein YejB low > 85
Escherichia coli BL21 0.55 ECD_00218 type 2 glutamine amidotransferase family protein 0.66 ECD_02108 microcin C ABC transporter permease 0.44 43
Escherichia coli BW25113 0.55 b0223 yafJ predicted amidotransfease (NCBI) 0.66 b2178 yejB predicted oligopeptide transporter subunit (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_03416 Putative glutamine amidotransferase YafJ 0.66 OHPLBJKB_01531 Inner membrane ABC transporter permease protein YejB low > 73
Escherichia coli ECRC62 0.55 BNILDI_00335 yafJ Putative glutamine amidotransferase YafJ 0.66 BNILDI_13880 yejB Inner membrane ABC transporter permease protein YejB
Escherichia coli ECRC101 0.54 OKFHMN_09770 yafJ class II glutamine amidotransferase 0.66 OKFHMN_23385 yejB Inner membrane ABC transporter permease protein YejB
Escherichia coli ECRC99 0.54 KEDOAH_18385 yafJ class II glutamine amidotransferase 0.66 KEDOAH_04800 yejB Inner membrane ABC transporter permease protein YejB
Escherichia coli ECRC101 0.54 MCAODC_00290 yafJ class II glutamine amidotransferase 0.66 MCAODC_14435 yejB Inner membrane ABC transporter permease protein YejB
Escherichia coli ECRC102 0.54 NIAGMN_07630 yafJ class II glutamine amidotransferase 0.66 NIAGMN_21150 yejB Inner membrane ABC transporter permease protein YejB
Escherichia coli ECRC98 0.54 JDDGAC_13395 yafJ class II glutamine amidotransferase 0.66 JDDGAC_27345 yejB Inner membrane ABC transporter permease protein YejB
Azospirillum brasilense Sp245 0.54 AZOBR_RS05605 glutamine amidotransferase 0.71 AZOBR_RS03820 microcin C ABC transporter permease YejB low > 97
Klebsiella michiganensis M5al 0.54 BWI76_RS05480 class II glutamine amidotransferase 0.64 BWI76_RS19785 microcin C ABC transporter permease YejB low > 92
Rahnella sp. WP5 0.54 EX31_RS21015 class II glutamine amidotransferase 0.65 EX31_RS19135 microcin C ABC transporter permease YejB low > 89
Serratia liquefaciens MT49 0.54 IAI46_04345 class II glutamine amidotransferase 0.68 IAI46_17320 microcin C ABC transporter permease YejB low > 86
Dickeya dianthicola 67-19 0.54 HGI48_RS16655 class II glutamine amidotransferase 0.67 HGI48_RS09225 microcin C ABC transporter permease YejB low > 71
Pectobacterium carotovorum WPP14 0.54 HER17_RS04650 class II glutamine amidotransferase 0.67 HER17_RS12925 microcin C ABC transporter permease YejB low > 75
Dickeya dianthicola ME23 0.53 DZA65_RS17745 class II glutamine amidotransferase 0.67 DZA65_RS09530 microcin C ABC transporter permease YejB low > 75
Dickeya dadantii 3937 0.53 DDA3937_RS16585 class II glutamine amidotransferase 0.67 DDA3937_RS09185 microcin C ABC transporter permease YejB low > 74
Dechlorosoma suillum PS 0.49 Dsui_1425 putative glutamine amidotransferase 0.16 Dsui_0412 ABC-type dipeptide/oligopeptide/nickel transport system, permease component low > 51
Paraburkholderia bryophila 376MFSha3.1 0.48 H281DRAFT_04266 glutamine amidotransferase 0.57 H281DRAFT_00561 microcin C transport system permease protein low > 103
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS26860 class II glutamine amidotransferase 0.57 QEN71_RS06175 ABC transporter permease subunit low > 153
Paraburkholderia graminis OAS925 0.48 ABIE53_003506 putative glutamine amidotransferase 0.57 ABIE53_002549 microcin C transport system permease protein low > 113
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS02595 glutamine amidotransferase 0.59 RR42_RS13380 microcin ABC transporter permease low > 128
Ralstonia solanacearum PSI07 0.47 RPSI07_RS21635 class II glutamine amidotransferase 0.56 RPSI07_RS18335 microcin C ABC transporter permease YejB low > 81
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS24040 glutamine amidotransferase 0.62 HSERO_RS17140 ABC transporter permease low > 78
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS11575 class II glutamine amidotransferase 0.59 RALBFv3_RS15040 microcin C ABC transporter permease YejB low > 76
Acinetobacter radioresistens SK82 0.47 MPMX26_02412 Putative glutamine amidotransferase YafJ 0.62 MPMX26_02272 Inner membrane ABC transporter permease protein YejB low > 36
Ralstonia solanacearum UW163 0.47 UW163_RS02010 class II glutamine amidotransferase 0.59 UW163_RS12510 microcin C ABC transporter permease YejB
Ralstonia solanacearum GMI1000 0.47 RS_RS02405 class II glutamine amidotransferase 0.59 RS_RS05855 microcin C ABC transporter permease YejB low > 80
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS16680 glutamine amidotransferase 0.57 BPHYT_RS12380 ABC transporter permease low > 109
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS07540 class II glutamine amidotransferase 0.56 ABZR87_RS10685 microcin C ABC transporter permease YejB low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.45 GFF3024 Glutamine amidotransferase, class-II 0.54 GFF4336 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) low > 90
Variovorax sp. OAS795 0.45 ABID97_RS04635 class II glutamine amidotransferase 0.62 ABID97_RS16515 ABC transporter permease subunit low > 91
Castellaniella sp019104865 MT123 0.43 ABCV34_RS06215 class II glutamine amidotransferase 0.17 ABCV34_RS13520 glutathione ABC transporter permease GsiC low > 48
Variovorax sp. SCN45 0.43 GFF6320 Putative glutamine amidotransferase YafJ 0.59 GFF228 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) low > 127
Mycobacterium tuberculosis H37Rv 0.11 Rv1061 Conserved protein 0.14 Rv3665c Probable dipeptide-transport integral membrane protein ABC transporter DppB

Not shown: 3 genomes with orthologs for Psest_1849 only; 16 genomes with orthologs for Psest_2066 only