Conservation of cofitness between GFF3622 and GFF1410 in Hydrogenophaga sp. GW460-11-11-14-LB1

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF3622 Bona fide RidA/YjgF/TdcF/RutC subgroup 1.0 GFF1410 Flagellar basal-body rod protein FlgG 0.45 14
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_2329 Endoribonuclease L-PSP 0.56 PfGW456L13_4386 Flagellar basal-body rod protein FlgG low > 87
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_179 Endoribonuclease L-PSP 0.57 Pf1N1B4_3569 Flagellar basal-body rod protein FlgG — —
Rhodopseudomonas palustris CGA009 0.32 TX73_018610 RidA family protein 0.49 TX73_020220 flagellar basal-body rod protein FlgG low > 86
Azospirillum sp. SherDot2 0.32 MPMX19_04018 2-aminomuconate deaminase 0.52 MPMX19_01484 Flagellar basal-body rod protein FlgG low > 112
Rhodanobacter sp. FW510-T8 0.29 OKGIIK_12095 ridA reactive intermediate/imine deaminase 0.57 OKGIIK_02675 flgG flagellar basal-body rod protein FlgG low > 52
Shewanella oneidensis MR-1 0.29 SO1404 endoribonuclease L-PSP, putative (NCBI ptt file) 0.54 SO3244 flgG flagellar basal-body rod protein FlgG (NCBI ptt file) low > 76
Desulfovibrio vulgaris Hildenborough JW710 0.29 DVU2203 endoribonuclease, L-PSP family (TIGR) 0.49 DVU0513 flgG flagellar basal-body rod protein FlgG (TIGR) 0.49 49
Lysobacter sp. OAE881 0.28 ABIE51_RS17260 RidA family protein 0.55 ABIE51_RS16695 flagellar basal-body rod protein FlgG low > 62
Dyella japonica UNC79MFTsu3.2 0.28 ABZR86_RS11845 RidA family protein 0.58 ABZR86_RS20100 flagellar basal-body rod protein FlgG low > 74
Pectobacterium carotovorum WPP14 0.28 HER17_RS19520 2-iminobutanoate/2-iminopropanoate deaminase 0.61 HER17_RS08190 flagellar basal-body rod protein FlgG low > 75
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_0208 endoribonuclease L-PSP 0.56 Psyr_3475 Flagellar basal body rod protein:Protein of unknown function DUF1078 — —
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_0208 endoribonuclease L-PSP 0.56 Psyr_3475 Flagellar basal body rod protein:Protein of unknown function DUF1078 low > 86
Escherichia coli BL21 0.28 ECD_02980 putative reactive intermediate deaminase 0.61 ECD_01074 flagellar component of cell-distal portion of basal-body rod low > 60
Escherichia coli ECRC99 0.28 KEDOAH_09725 tdcF enamine/imine deaminase 0.61 KEDOAH_24105 flgG flagellar basal-body rod protein FlgG — —
Escherichia coli BW25113 0.28 b3113 yhaR orf, hypothetical protein (VIMSS) 0.61 b1078 flgG flagellar component of cell-distal portion of basal-body rod (NCBI) low > 76
Escherichia coli ECRC98 0.28 JDDGAC_22055 tdcF enamine/imine deaminase 0.61 JDDGAC_07310 flgG flagellar basal-body rod protein FlgG — —
Escherichia coli ECRC102 0.28 NIAGMN_16185 tdcF enamine/imine deaminase 0.61 NIAGMN_24180 flgG flagellar basal-body rod protein FlgG — —
Escherichia fergusonii Becca 0.28 EFB2_00701 Putative reactive intermediate deaminase TdcF 0.61 EFB2_02896 Flagellar basal-body rod protein FlgG low > 86
Escherichia coli ECOR38 0.28 HEPCGN_17255 tdcF enamine/imine deaminase 0.61 HEPCGN_23840 flgG flagellar basal-body rod protein FlgG low > 85
Escherichia coli ECOR27 0.28 NOLOHH_10200 tdcF enamine/imine deaminase 0.60 NOLOHH_21180 flgG flagellar basal-body rod protein FlgG low > 57
Escherichia coli ECRC62 0.28 BNILDI_01325 tdcF enamine/imine deaminase 0.61 BNILDI_19340 flgG flagellar basal-body rod protein FlgG — —
Escherichia coli ECRC101 0.28 MCAODC_08935 tdcF enamine/imine deaminase 0.61 MCAODC_23010 flgG flagellar basal-body rod protein FlgG — —
Escherichia coli ECRC101 0.28 OKFHMN_18420 tdcF enamine/imine deaminase 0.61 OKFHMN_03650 flgG flagellar basal-body rod protein FlgG — —
Escherichia coli Nissle 1917 0.28 ECOLIN_RS17920 enamine/imine deaminase 0.61 ECOLIN_RS06240 flagellar basal-body rod protein FlgG — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.28 OHPLBJKB_00587 Putative reactive intermediate deaminase TdcF 0.60 OHPLBJKB_02587 Flagellar basal-body rod protein FlgG low > 73
Rhodanobacter denitrificans MT42 0.28 LRK55_RS11525 RidA family protein 0.58 LRK55_RS13170 flagellar basal-body rod protein FlgG low > 63
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS11800 RidA family protein 0.57 LRK54_RS13430 flagellar basal-body rod protein FlgG low > 59
Dickeya dianthicola 67-19 0.28 HGI48_RS01890 2-iminobutanoate/2-iminopropanoate deaminase 0.62 HGI48_RS13500 flagellar basal-body rod protein FlgG — —
Enterobacter asburiae PDN3 0.28 EX28DRAFT_3444 reactive intermediate/imine deaminase 0.61 EX28DRAFT_1854 flagellar basal-body rod protein FlgG, Gram-negative bacteria low > 76
Shewanella loihica PV-4 0.28 Shew_3500 putative endoribonuclease L-PSP (RefSeq) 0.54 Shew_1350 flgG flagellar basal body rod protein FlgG (RefSeq) low > 60
Dickeya dianthicola ME23 0.28 DZA65_RS01960 2-iminobutanoate/2-iminopropanoate deaminase 0.62 DZA65_RS13985 flagellar basal-body rod protein FlgG low > 75
Pseudomonas sp. S08-1 0.27 OH686_13545 RidA/YER057c/UK114 superfamily protein 0.59 OH686_02950 flagellar basal-body rod protein FlgG low > 80
Erwinia tracheiphila SCR3 0.27 LU632_RS20960 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.64 LU632_RS10420 flgG flagellar basal-body rod protein FlgG low > 74
Paraburkholderia sabiae LMG 24235 0.27 QEN71_RS41190 RidA family protein 0.63 QEN71_RS28895 flagellar basal-body rod protein FlgG — —
Dickeya dadantii 3937 0.27 DDA3937_RS01915 2-iminobutanoate/2-iminopropanoate deaminase 0.62 DDA3937_RS13455 flagellar basal-body rod protein FlgG low > 74
Enterobacter sp. TBS_079 0.27 MPMX20_00542 2-iminobutanoate/2-iminopropanoate deaminase 0.61 MPMX20_01757 Flagellar basal-body rod protein FlgG low > 85
Shewanella sp. ANA-3 0.27 Shewana3_2971 putative endoribonuclease L-PSP (RefSeq) 0.54 Shewana3_1326 flgG flagellar basal body rod protein FlgG (RefSeq) low > 73
Pantoea sp. MT58 0.27 IAI47_12520 pyrimidine utilization protein C 0.62 IAI47_12140 flagellar basal-body rod protein FlgG low > 76
Pseudomonas simiae WCS417 0.27 PS417_27835 endoribonuclease 0.56 PS417_19885 flagellar basal body rod protein FlgG low > 88
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS29515 RidA family protein 0.56 PFLU_RS21855 flagellar basal-body rod protein FlgG low > 109
Pseudomonas fluorescens SBW25 0.27 PFLU_RS29515 RidA family protein 0.56 PFLU_RS21855 flagellar basal-body rod protein FlgG low > 109
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.27 GFF928 Endoribonuclease L-PSP 0.61 GFF3359 Flagellar basal-body rod protein FlgG low > 78
Rahnella sp. WP5 0.27 EX31_RS12775 2-iminobutanoate/2-iminopropanoate deaminase 0.63 EX31_RS11290 flagellar basal-body rod protein FlgG low > 89
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_09285 reactive intermediate/imine deaminase 0.56 AO353_18600 flagellar basal-body rod protein FlgG low > 101
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_12475 reactive intermediate/imine deaminase 0.56 AO356_03925 flagellar basal-body rod protein FlgG low > 104
Paraburkholderia bryophila 376MFSha3.1 0.27 H281DRAFT_05869 2-iminobutanoate/2-iminopropanoate deaminase 0.63 H281DRAFT_05767 flagellar basal-body rod protein FlgG low > 103
Pseudomonas sp. RS175 0.27 PFR28_04425 2-iminobutanoate/2-iminopropanoate deaminase 0.56 PFR28_00805 Flagellar basal-body rod protein FlgG low > 88
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_4360 Bona fide RidA/YjgF/TdcF/RutC subgroup 0.56 Pf6N2E2_2627 Flagellar basal-body rod protein FlgG low > 103
Xanthomonas campestris pv. campestris strain 8004 0.26 Xcc-8004.1205.1 hypothetical protein 0.58 Xcc-8004.2784.1 Flagellar basal-body rod protein FlgG low > 74
Shewanella amazonensis SB2B 0.26 Sama_0263 YjgF-like protein (RefSeq) 0.54 Sama_2313 flgG flagellar basal body rod protein FlgG (RefSeq) low > 62
Castellaniella sp019104865 MT123 0.26 ABCV34_RS03565 Rid family detoxifying hydrolase 0.58 ABCV34_RS05745 flagellar basal-body rod protein FlgG — —
Caulobacter crescentus NA1000 0.26 CCNA_02886 RutC-family pyrimidine utilization protein C 0.46 CCNA_02143 flagellar basal-body rod protein flgG low > 66
Caulobacter crescentus NA1000 Δfur 0.26 CCNA_02886 RutC-family pyrimidine utilization protein C 0.46 CCNA_02143 flagellar basal-body rod protein flgG low > 67
Pseudomonas putida KT2440 0.26 PP_5303 aminoacrylate/iminopropionate hydrolase/deaminase 0.57 PP_4385 flagellar basal-body rod protein FlgG low > 96
Dechlorosoma suillum PS 0.25 Dsui_0312 endoribonuclease L-PSP, putative 0.65 Dsui_1737 flagellar basal-body rod protein FlgG — —
Alteromonas macleodii MIT1002 0.25 MIT1002_00109 Putative reactive intermediate deaminase TdcF 0.46 MIT1002_01046 Distal rod protein low > 70
Pseudomonas stutzeri RCH2 0.25 Psest_3818 endoribonuclease L-PSP, putative 0.56 Psest_2963 flagellar basal-body rod protein FlgG, Gram-negative bacteria low > 67
Serratia liquefaciens MT49 0.25 IAI46_09040 pyrimidine utilization protein C 0.62 IAI46_15935 flagellar basal-body rod protein FlgG low > 86
Azospirillum brasilense Sp245 0.24 AZOBR_RS32435 dfrA 0.53 AZOBR_RS11220 flagellar basal body rod protein FlgG low > 97
Desulfovibrio vulgaris Miyazaki F 0.23 DvMF_1512 endoribonuclease L-PSP (RefSeq) 0.48 DvMF_2518 flgG flagellar basal body rod protein FlgG (RefSeq) — —

Not shown: 16 genomes with orthologs for GFF3622 only; 19 genomes with orthologs for GFF1410 only