Conservation of cofitness between GFF2198 and GFF1396 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF2198 NADP-dependent malic enzyme (EC 1.1.1.40) 1.0 GFF1396 Glucose-6-phosphate isomerase (EC 5.3.1.9) 0.62 7
Escherichia fergusonii Becca 0.95 EFB2_01425 NADP-dependent malic enzyme 0.96 EFB2_04577 Glucose-6-phosphate isomerase low > 86
Escherichia coli ECRC101 0.95 OKFHMN_22005 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase 0.96 OKFHMN_13175 pgi glucose-6-phosphate isomerase — —
Escherichia coli ECRC101 0.95 MCAODC_12535 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase 0.96 MCAODC_03675 pgi glucose-6-phosphate isomerase — —
Escherichia coli ECRC102 0.95 NIAGMN_19775 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase 0.96 NIAGMN_10925 pgi glucose-6-phosphate isomerase — —
Escherichia coli ECOR38 0.95 HEPCGN_21175 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase 0.96 HEPCGN_11685 pgi glucose-6-phosphate isomerase low > 85
Escherichia coli ECRC98 0.95 JDDGAC_25950 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase 0.96 JDDGAC_16800 pgi glucose-6-phosphate isomerase — —
Escherichia coli Nissle 1917 0.95 ECOLIN_RS14055 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase 0.96 ECOLIN_RS23240 glucose-6-phosphate isomerase low > 52
Escherichia coli ECOR27 0.95 NOLOHH_13685 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase 0.96 NOLOHH_05335 pgi glucose-6-phosphate isomerase low > 57
Escherichia coli ECRC62 0.95 BNILDI_12495 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase 0.96 BNILDI_06185 pgi glucose-6-phosphate isomerase — —
Enterobacter asburiae PDN3 0.95 EX28DRAFT_0198 Malic enzyme 0.96 EX28DRAFT_4318 Glucose-6-phosphate isomerase low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.95 OHPLBJKB_01268 NADP-dependent malic enzyme 0.96 OHPLBJKB_04021 Glucose-6-phosphate isomerase low > 73
Escherichia coli BW25113 0.95 b2463 maeB malic enzyme (NCBI) 0.96 b4025 pgi glucose-6-phosphate isomerase (NCBI) low > 76
Escherichia coli ECRC99 0.95 KEDOAH_06215 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase 0.96 KEDOAH_14985 pgi glucose-6-phosphate isomerase — —
Escherichia coli BL21 0.95 ECD_02354 malic enzyme: putative oxidoreductase/phosphotransacetylase 0.96 ECD_03897 glucosephosphate isomerase low > 60
Enterobacter sp. TBS_079 0.94 MPMX20_03324 NADP-dependent malic enzyme 0.95 MPMX20_00241 Glucose-6-phosphate isomerase low > 85
Klebsiella michiganensis M5al 0.94 BWI76_RS20830 bifunctional malic enzyme oxidoreductase/phosphotransacetylase 0.96 BWI76_RS01800 glucose-6-phosphate isomerase low > 92
Serratia liquefaciens MT49 0.87 IAI46_18585 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase 0.89 IAI46_23090 glucose-6-phosphate isomerase low > 86
Pectobacterium carotovorum WPP14 0.87 HER17_RS17280 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase 0.89 HER17_RS02340 glucose-6-phosphate isomerase low > 75
Rahnella sp. WP5 0.87 EX31_RS20275 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase 0.88 EX31_RS11815 glucose-6-phosphate isomerase low > 89
Dickeya dadantii 3937 0.86 DDA3937_RS04355 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase 0.90 DDA3937_RS19015 glucose-6-phosphate isomerase low > 74
Dickeya dianthicola ME23 0.85 DZA65_RS04265 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase 0.89 DZA65_RS20220 glucose-6-phosphate isomerase low > 75
Dickeya dianthicola 67-19 0.84 HGI48_RS04345 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase 0.89 HGI48_RS19100 glucose-6-phosphate isomerase low > 71
Dechlorosoma suillum PS 0.63 Dsui_0543 malic enzyme 0.49 Dsui_1239 glucose-6-phosphate isomerase — —
Paraburkholderia graminis OAS925 0.63 ABIE53_000015 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) 0.44 ABIE53_002138 glucose-6-phosphate isomerase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.63 H281DRAFT_05846 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) 0.45 H281DRAFT_00906 glucose-6-phosphate isomerase — —
Burkholderia phytofirmans PsJN 0.63 BPHYT_RS18310 malic enzyme 0.46 BPHYT_RS09500 glucose-6-phosphate isomerase low > 109
Paraburkholderia sabiae LMG 24235 0.63 QEN71_RS28455 NADP-dependent malic enzyme 0.45 QEN71_RS21935 glucose-6-phosphate isomerase low > 153
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS16825 NADP-dependent malic enzyme oxidoreductase 0.53 HSERO_RS12485 glucose-6-phosphate isomerase low > 78
Ralstonia solanacearum IBSBF1503 0.62 RALBFv3_RS03260 NADP-dependent malic enzyme 0.46 RALBFv3_RS01300 glucose-6-phosphate isomerase low > 76
Ralstonia solanacearum UW163 0.62 UW163_RS10465 NADP-dependent malic enzyme 0.46 UW163_RS14610 glucose-6-phosphate isomerase — —
Ralstonia solanacearum GMI1000 0.62 RS_RS10650 NADP-dependent malic enzyme 0.47 RS_RS08695 glucose-6-phosphate isomerase — —
Ralstonia solanacearum PSI07 0.62 RPSI07_RS14050 NADP-dependent malic enzyme 0.46 RPSI07_RS16175 glucose-6-phosphate isomerase low > 81
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS05210 malic enzyme 0.51 RR42_RS09060 glucose-6-phosphate isomerase low > 128
Acinetobacter radioresistens SK82 0.61 MPMX26_01000 NADP-dependent malic enzyme 0.43 MPMX26_00065 Glucose-6-phosphate isomerase low > 36
Variovorax sp. OAS795 0.61 ABID97_RS22340 NADP-dependent malic enzyme 0.38 ABID97_RS07100 glucose-6-phosphate isomerase — —
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS01565 NADP-dependent malic enzyme 0.46 ABZR87_RS12745 glucose-6-phosphate isomerase — —
Variovorax sp. SCN45 0.60 GFF1796 NADP-dependent malic enzyme (EC 1.1.1.40) 0.39 GFF5267 Glucose-6-phosphate isomerase (EC 5.3.1.9) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.60 GFF3306 NADP-dependent malic enzyme (EC 1.1.1.40) 0.35 GFF5497 Glucose-6-phosphate isomerase (EC 5.3.1.9) low > 90
Castellaniella sp019104865 MT123 0.60 ABCV34_RS01715 NADP-dependent malic enzyme 0.29 ABCV34_RS11120 glucose-6-phosphate isomerase — —
Magnetospirillum magneticum AMB-1 0.60 AMB_RS03695 NADP-dependent malic enzyme 0.58 AMB_RS22330 glucose-6-phosphate isomerase — —
Lysobacter sp. OAE881 0.60 ABIE51_RS18820 NADP-dependent malic enzyme 0.30 ABIE51_RS08040 glucose-6-phosphate isomerase low > 62
Acidovorax sp. GW101-3H11 0.59 Ac3H11_1079 NADP-dependent malic enzyme (EC 1.1.1.40) 0.40 Ac3H11_2077 Glucose-6-phosphate isomerase (EC 5.3.1.9) — —
Azospirillum sp. SherDot2 0.59 MPMX19_04254 NADP-dependent malic enzyme 0.63 MPMX19_00519 Glucose-6-phosphate isomerase — —
Xanthomonas campestris pv. campestris strain 8004 0.59 Xcc-8004.1035.1 NADP-dependent malic enzyme (EC 1.1.1.40) 0.32 Xcc-8004.3049.1 Glucose-6-phosphate isomerase (EC 5.3.1.9) — —
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS12415 NADP-dependent malic enzyme 0.35 ABZR86_RS00830 glucose-6-phosphate isomerase low > 74
Rhodanobacter sp. FW510-T8 0.58 OKGIIK_12705 pta NADP-dependent malic enzyme 0.51 OKGIIK_15520 pgi glucose-6-phosphate isomerase low > 52
Rhodanobacter denitrificans FW104-10B01 0.58 LRK54_RS11170 NADP-dependent malic enzyme 0.52 LRK54_RS08755 glucose-6-phosphate isomerase — —
Rhodanobacter denitrificans MT42 0.58 LRK55_RS10875 NADP-dependent malic enzyme 0.53 LRK55_RS08520 glucose-6-phosphate isomerase — —
Caulobacter crescentus NA1000 0.57 CCNA_02704 NADP-dependent malic enzyme 0.38 CCNA_00222 glucose-6-phosphate isomerase/glucose-6 phosphate 1-epimerase — —
Caulobacter crescentus NA1000 Δfur 0.57 CCNA_02704 NADP-dependent malic enzyme 0.38 CCNA_00222 glucose-6-phosphate isomerase/glucose-6 phosphate 1-epimerase — —
Azospirillum brasilense Sp245 0.56 AZOBR_RS21145 NADP-dependent malic enzyme 0.63 AZOBR_RS05045 glucose-6-phosphate isomerase — —
Rhizobium sp. OAE497 0.55 ABIE40_RS10450 NADP-dependent malic enzyme 0.51 ABIE40_RS02150 glucose-6-phosphate isomerase — —
Sinorhizobium meliloti 1021 0.55 SMc00169 malic enzyme 0.50 SMc02163 glucose-6-phosphate isomerase — —
Phaeobacter inhibens DSM 17395 0.54 PGA1_c11910 Malate dehydrogenase (decarboxylating) (EC 1.1.1.39) (from data) 0.47 PGA1_c27980 glucose-6-phosphate isomerase Pgi — —
Agrobacterium fabrum C58 0.54 Atu1652 NADP-dependent malic enzyme 0.50 Atu0404 glucose-6-phosphate isomerase — —
Bosea sp. OAE506 0.52 ABIE41_RS21715 NADP-dependent malic enzyme 0.48 ABIE41_RS07535 glucose-6-phosphate isomerase low > 77
Dinoroseobacter shibae DFL-12 0.52 Dshi_0826 malic protein NAD-binding (RefSeq) 0.46 Dshi_1682 Glucose-6-phosphate isomerase (RefSeq) — —
Pedobacter sp. GW460-11-11-14-LB5 0.46 CA265_RS19000 NADP-dependent malic enzyme 0.73 CA265_RS17975 glucose-6-phosphate isomerase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.46 Echvi_4081 Malic enzyme 0.71 Echvi_4036 Glucose-6-phosphate isomerase low > 79
Pontibacter actiniarum KMM 6156, DSM 19842 0.45 CA264_14540 NADP-dependent malic enzyme 0.59 CA264_07470 glucose-6-phosphate isomerase low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.44 ABZR88_RS18305 NADP-dependent malic enzyme 0.73 ABZR88_RS03585 glucose-6-phosphate isomerase — —
Rhodospirillum rubrum S1H 0.42 Rru_A3542 malate dehydrogenase (NCBI) 0.61 Rru_A2947 Glucose-6-phosphate isomerase (NCBI) — —
Sphingomonas koreensis DSMZ 15582 0.42 Ga0059261_3786 Malic enzyme 0.29 Ga0059261_1948 Glucose-6-phosphate isomerase low > 68
Brevundimonas sp. GW460-12-10-14-LB2 0.41 A4249_RS13295 NADP-dependent malic enzyme 0.37 A4249_RS14585 glucose-6-phosphate isomerase — —

Not shown: 7 genomes with orthologs for GFF2198 only; 25 genomes with orthologs for GFF1396 only