Conservation of cofitness between GFF5146 and GFF1223 in Hydrogenophaga sp. GW460-11-11-14-LB1

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF5146 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) 1.0 GFF1223 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) 0.83 4
Variovorax sp. SCN45 0.84 GFF553 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) 0.74 GFF2572 Protein-export protein SecB (maintains pre-export unfolded state) 0.64 27
Variovorax sp. OAS795 0.81 ABID97_RS17860 peptidylprolyl isomerase 0.75 ABID97_RS07400 protein-export chaperone SecB low > 91
Dechlorosoma suillum PS 0.72 Dsui_3088 peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 0.50 Dsui_1275 protein-export chaperone SecB low > 51
Paraburkholderia sabiae LMG 24235 0.70 QEN71_RS06115 peptidylprolyl isomerase 0.66 QEN71_RS01460 protein-export chaperone SecB low > 153
Burkholderia phytofirmans PsJN 0.70 BPHYT_RS12445 cyclophilin 0.65 BPHYT_RS02605 protein-export protein SecB — —
Paraburkholderia graminis OAS925 0.70 ABIE53_002710 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) 0.64 ABIE53_000666 preprotein translocase subunit SecB low > 113
Paraburkholderia bryophila 376MFSha3.1 0.70 H281DRAFT_00543 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) 0.65 H281DRAFT_02001 protein translocase subunit secB low > 103
Cupriavidus basilensis FW507-4G11 0.70 RR42_RS06335 cyclophilin 0.55 RR42_RS01840 preprotein translocase subunit SecB — —
Acidovorax sp. GW101-3H11 0.69 Ac3H11_41 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) 0.76 Ac3H11_3859 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) low > 79
Ralstonia solanacearum GMI1000 0.68 RS_RS05800 cyclophilin 0.65 RS_RS01755 protein-export protein SecB — —
Ralstonia solanacearum PSI07 0.67 RPSI07_RS18390 cyclophilin 0.65 RPSI07_RS22395 protein-export chaperone SecB — —
Ralstonia solanacearum IBSBF1503 0.66 RALBFv3_RS14985 cyclophilin 0.65 RALBFv3_RS10915 protein-export chaperone SecB — —
Ralstonia solanacearum UW163 0.66 UW163_RS12455 cyclophilin 0.65 UW163_RS02665 protein-export chaperone SecB — —
Castellaniella sp019104865 MT123 0.66 ABCV34_RS00375 peptidylprolyl isomerase 0.56 ABCV34_RS14255 protein-export chaperone SecB low > 48
Pseudomonas putida KT2440 0.65 PP_2903 peptidyl-prolyl cis-trans isomerase B (rotamase B) 0.38 PP_5053 Protein-export protein SecB low > 96
Herbaspirillum seropedicae SmR1 0.63 HSERO_RS09310 cyclophilin 0.63 HSERO_RS00805 preprotein translocase subunit SecB — —
Pseudomonas fluorescens FW300-N2E3 0.62 AO353_27825 peptidylprolyl isomerase 0.38 AO353_12130 preprotein translocase subunit SecB low > 101
Pseudomonas sp. S08-1 0.61 OH686_03750 Peptidyl-prolyl cis-trans isomerase PpiB 0.35 OH686_14670 protein-export chaperone SecB 0.48 70
Pseudomonas fluorescens GW456-L13 0.61 PfGW456L13_2608 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) 0.39 PfGW456L13_350 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) low > 87
Pseudomonas stutzeri RCH2 0.61 Psest_2304 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 0.36 Psest_0165 protein-export chaperone SecB low > 67
Pseudomonas fluorescens FW300-N2E2 0.61 Pf6N2E2_151 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) 0.38 Pf6N2E2_3829 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) — —
Pseudomonas simiae WCS417 0.61 PS417_16900 peptidylprolyl isomerase 0.37 PS417_01620 preprotein translocase subunit SecB — —
Pseudomonas fluorescens FW300-N2C3 0.61 AO356_01015 peptidylprolyl isomerase 0.39 AO356_09755 preprotein translocase subunit SecB low > 104
Rahnella sp. WP5 0.60 EX31_RS22640 peptidylprolyl isomerase B 0.41 EX31_RS14345 protein-export chaperone SecB — —
Pseudomonas fluorescens SBW25 0.60 PFLU_RS18885 peptidyl-prolyl cis-trans isomerase 0.37 PFLU_RS01670 protein-export chaperone SecB low > 109
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS18885 peptidyl-prolyl cis-trans isomerase 0.37 PFLU_RS01670 protein-export chaperone SecB low > 109
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_4004 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) 0.39 Pf1N1B4_1614 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) low > 87
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_1733 Peptidyl-prolyl cis-trans isomerase, cyclophilin type 0.38 Psyr_4882 protein translocase subunit secB low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_1733 Peptidyl-prolyl cis-trans isomerase, cyclophilin type 0.38 Psyr_4882 protein translocase subunit secB low > 86
Pseudomonas sp. RS175 0.59 PFR28_02745 Peptidyl-prolyl cis-trans isomerase cyp18 0.37 PFR28_04941 Protein-export protein SecB low > 88
Acinetobacter radioresistens SK82 0.59 MPMX26_01727 Peptidyl-prolyl cis-trans isomerase cyp18 0.30 MPMX26_02634 Protein-export protein SecB low > 36
Shewanella sp. ANA-3 0.59 Shewana3_2665 peptidyl-prolyl cis-trans isomerase, cyclophilin type (RefSeq) 0.40 Shewana3_0053 preprotein translocase subunit SecB (RefSeq) — —
Escherichia coli ECRC62 0.58 BNILDI_22245 ppiB peptidylprolyl isomerase B 0.39 BNILDI_03885 secB protein-export chaperone SecB — —
Escherichia fergusonii Becca 0.58 EFB2_03536 Peptidyl-prolyl cis-trans isomerase B 0.39 EFB2_00201 Protein-export protein SecB — —
Escherichia coli ECRC101 0.58 OKFHMN_07825 ppiB peptidylprolyl isomerase B 0.39 OKFHMN_15750 secB protein-export chaperone SecB — —
Escherichia coli ECRC99 0.58 KEDOAH_20145 ppiB peptidylprolyl isomerase B 0.39 KEDOAH_12400 secB protein-export chaperone SecB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.58 OHPLBJKB_03156 Peptidyl-prolyl cis-trans isomerase B 0.39 OHPLBJKB_00090 Protein-export protein SecB — —
Escherichia coli ECRC102 0.58 NIAGMN_05880 ppiB peptidylprolyl isomerase B 0.39 NIAGMN_13510 secB protein-export chaperone SecB — —
Escherichia coli ECRC101 0.58 MCAODC_27045 ppiB peptidylprolyl isomerase B 0.39 MCAODC_06260 secB protein-export chaperone SecB — —
Escherichia coli ECOR27 0.58 NOLOHH_00815 ppiB peptidylprolyl isomerase B 0.39 NOLOHH_07630 secB protein-export chaperone SecB — —
Escherichia coli BW25113 0.58 b0525 ppiB peptidyl-prolyl cis-trans isomerase B (rotamase B) (NCBI) 0.39 b3609 secB export protein SecB (NCBI) — —
Escherichia coli ECRC98 0.58 JDDGAC_11475 ppiB peptidylprolyl isomerase B 0.39 JDDGAC_19375 secB protein-export chaperone SecB — —
Escherichia coli BL21 0.58 ECD_00475 peptidyl-prolyl cis-trans isomerase B (rotamase B) 0.39 ECD_03467 protein export chaperone — —
Shewanella oneidensis MR-1 0.58 SO1790 ppiB-1 peptidyl-prolyl cis-trans isomerase B (NCBI ptt file) 0.40 SO0052 secB protein-export protein SecB (NCBI ptt file) — —
Escherichia coli Nissle 1917 0.58 ECOLIN_RS03045 peptidylprolyl isomerase B 0.39 ECOLIN_RS20600 protein-export chaperone SecB — —
Pantoea sp. MT58 0.58 IAI47_14340 peptidylprolyl isomerase B 0.38 IAI47_00735 protein-export chaperone SecB — —
Escherichia coli ECOR38 0.58 HEPCGN_06465 ppiB peptidylprolyl isomerase B 0.39 HEPCGN_14590 secB protein-export chaperone SecB — —
Serratia liquefaciens MT49 0.58 IAI46_05385 peptidylprolyl isomerase B 0.39 IAI46_24695 protein-export chaperone SecB low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF4441 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) 0.40 GFF401 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) — —
Alteromonas macleodii MIT1002 0.58 MIT1002_02501 Peptidyl-prolyl cis-trans isomerase B 0.39 MIT1002_00486 Protein-export protein SecB low > 70
Klebsiella michiganensis M5al 0.57 BWI76_RS07085 peptidyl-prolyl cis-trans isomerase 0.39 BWI76_RS27215 protein-export protein SecB — —
Enterobacter asburiae PDN3 0.57 EX28DRAFT_2455 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 0.39 EX28DRAFT_3860 protein-export chaperone SecB — —
Erwinia tracheiphila SCR3 0.57 LU632_RS15235 ppiB peptidylprolyl isomerase B 0.38 LU632_RS21880 secB protein-export chaperone SecB — —
Pectobacterium carotovorum WPP14 0.57 HER17_RS06485 peptidylprolyl isomerase B 0.38 HER17_RS20740 protein-export chaperone SecB — —
Enterobacter sp. TBS_079 0.57 MPMX20_01101 Peptidyl-prolyl cis-trans isomerase B 0.39 MPMX20_00124 Protein-export protein SecB — —
Shewanella loihica PV-4 0.57 Shew_2512 peptidylprolyl isomerase (RefSeq) 0.41 Shew_3804 preprotein translocase subunit SecB (RefSeq) — —
Dickeya dadantii 3937 0.56 DDA3937_RS15095 peptidylprolyl isomerase B 0.38 DDA3937_RS20410 protein-export chaperone SecB — —
Marinobacter adhaerens HP15 0.56 HP15_2190 peptidyl-prolyl cis-trans isomerase B 0.40 HP15_3003 protein-export protein SecB low > 73
Dickeya dianthicola ME23 0.56 DZA65_RS15980 peptidylprolyl isomerase B 0.38 DZA65_RS00845 protein-export chaperone SecB — —
Dickeya dianthicola 67-19 0.56 HGI48_RS15175 peptidylprolyl isomerase B 0.38 HGI48_RS00790 protein-export chaperone SecB low > 71
Shewanella amazonensis SB2B 0.54 Sama_1220 peptidyl-prolyl cis-trans isomerase B (RefSeq) 0.42 Sama_0062 preprotein translocase subunit SecB (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.54 CSW01_09260 peptidylprolyl isomerase 0.36 CSW01_13410 protein-export protein SecB low > 62

Not shown: 5 genomes with orthologs for GFF5146 only; 13 genomes with orthologs for GFF1223 only