Conservation of cofitness between PS417_00160 and PS417_05575 in Pseudomonas simiae WCS417

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_00160 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 1.0 PS417_05575 Glycerol kinase (EC 2.7.1.30) (from data) 0.63 1
Pseudomonas fluorescens SBW25 0.99 PFLU_RS00155 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.98 PFLU_RS05660 glycerol kinase GlpK 0.87 2
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS00155 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.98 PFLU_RS05660 glycerol kinase GlpK 0.60 1
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_399 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) 0.98 Pf1N1B4_767 Glycerol kinase (EC 2.7.1.30) low > 87
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_20285 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.98 AO356_18250 glycerol kinase 0.28 8
Pseudomonas fluorescens FW300-N2E2 0.88 Pf6N2E2_5976 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) 0.98 Pf6N2E2_5574 Glycerol kinase (EC 2.7.1.30) 0.35 5
Pseudomonas sp. RS175 0.87 PFR28_02986 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.96 PFR28_03368 Glycerol kinase low > 88
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_01265 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.97 AO353_04180 glycerol kinase low > 101
Pseudomonas syringae pv. syringae B728a 0.85 Psyr_1988 2-keto-3-deoxy-phosphogalactonate aldolase 0.90 Psyr_3905 glycerol kinase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.85 Psyr_1988 2-keto-3-deoxy-phosphogalactonate aldolase 0.90 Psyr_3905 glycerol kinase — —
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_2127 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) 0.96 PfGW456L13_1734 Glycerol kinase (EC 2.7.1.30) low > 87
Herbaspirillum seropedicae SmR1 0.68 HSERO_RS05155 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.55 HSERO_RS04875 glycerol kinase low > 78
Escherichia coli Nissle 1917 0.62 ECOLIN_RS22095 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.76 ECOLIN_RS22610 glycerol kinase GlpK low > 52
Escherichia fergusonii Becca 0.62 EFB2_04786 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.76 EFB2_04692 Glycerol kinase low > 86
Escherichia coli BL21 0.62 ECD_03722 hypothetical protein 0.76 ECD_03811 glycerol kinase low > 60
Azospirillum brasilense Sp245 0.62 AZOBR_RS22730 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.49 AZOBR_RS25905 glycerol kinase low > 97
Paraburkholderia graminis OAS925 0.59 ABIE53_003556 2-dehydro-3-deoxyphosphogalactonate aldolase 0.60 ABIE53_003469 glycerol kinase low > 113
Burkholderia phytofirmans PsJN 0.58 BPHYT_RS16945 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.61 BPHYT_RS16495 glycerol kinase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_06295 2-keto-3-deoxy-phosphogalactonate aldolase 0.60 H281DRAFT_04229 glycerol kinase low > 103
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS27105 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.59 QEN71_RS02230 glycerol kinase GlpK low > 153
Azospirillum sp. SherDot2 0.53 MPMX19_03916 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.49 MPMX19_05974 Glycerol kinase low > 112
Variovorax sp. OAS795 0.49 ABID97_RS21215 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.53 ABID97_RS19965 glycerol kinase GlpK low > 91
Rhodanobacter sp. FW510-T8 0.48 OKGIIK_12505 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.55 OKGIIK_00030 glpK glycerol kinase GlpK low > 52
Acidovorax sp. GW101-3H11 0.46 Ac3H11_601 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) 0.53 Ac3H11_789 Glycerol kinase (EC 2.7.1.30) low > 79
Agrobacterium fabrum C58 0.46 Atu0703 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 0.49 Atu3890 glycerol kinase low > 89
Sphingomonas koreensis DSMZ 15582 0.46 Ga0059261_1625 2-keto-3-deoxy-6-phosphogluconate aldolase 0.40 Ga0059261_0833 Glycerol kinase low > 68
Brevundimonas sp. GW460-12-10-14-LB2 0.44 A4249_RS01965 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.43 A4249_RS13260 glycerol kinase GlpK low > 48
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS01450 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.55 ABZR87_RS03055 glycerol kinase GlpK low > 80
Ralstonia solanacearum GMI1000 0.44 RS_RS13770 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.55 RS_RS15335 glycerol kinase low > 80
Serratia liquefaciens MT49 0.44 IAI46_03170 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.75 IAI46_24600 glycerol kinase GlpK low > 86
Ralstonia solanacearum PSI07 0.44 RPSI07_RS11420 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.55 RPSI07_RS09850 glycerol kinase low > 81
Variovorax sp. SCN45 0.43 GFF6770 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) 0.54 GFF2679 Glycerol kinase (EC 2.7.1.30) low > 127
Dickeya dianthicola 67-19 0.43 HGI48_RS06935 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.76 HGI48_RS20485 glycerol kinase GlpK low > 71
Dickeya dianthicola ME23 0.43 DZA65_RS07280 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.76 DZA65_RS21530 glycerol kinase GlpK low > 75
Pantoea sp. MT58 0.43 IAI47_00040 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.74 IAI47_00825 glycerol kinase GlpK low > 76
Escherichia coli ECRC62 0.42 BNILDI_04325 dgoA 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.76 BNILDI_05620 glpK glycerol kinase GlpK — —
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS01220 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.61 ABZR86_RS20035 glycerol kinase GlpK low > 74
Escherichia coli ECOR27 0.42 NOLOHH_07205 dgoA 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.76 NOLOHH_05910 glpK glycerol kinase GlpK low > 57
Escherichia coli BW25113 0.42 b4477 dgoA 2-dehydro-3-deoxy-6-phosphogalactonate aldolase (NCBI) 0.76 b3926 glpK glycerol kinase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_00010 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.76 OHPLBJKB_04125 Glycerol kinase low > 73
Escherichia coli ECOR38 0.41 HEPCGN_13770 dgoA 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.76 HEPCGN_12420 glpK glycerol kinase GlpK low > 85
Enterobacter sp. TBS_079 0.41 MPMX20_00010 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.76 MPMX20_04543 Glycerol kinase low > 85
Rahnella sp. WP5 0.41 EX31_RS10325 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.76 EX31_RS14270 glycerol kinase GlpK low > 89
Enterobacter asburiae PDN3 0.41 EX28DRAFT_3980 2-keto-3-deoxy-6-phosphogluconate aldolase 0.76 EX28DRAFT_4399 glycerol kinase low > 76
Dinoroseobacter shibae DFL-12 0.40 Dshi_1241 KDPG and KHG aldolase (RefSeq) 0.50 Dshi_3420 Glycerol kinase (EC 2.7.1.30) (from data) low > 64
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF1764 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) 0.75 GFF2307 Glycerol kinase (EC 2.7.1.30) low > 78
Sinorhizobium meliloti 1021 0.40 SMc00882 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.50 SM_b21009 Glycerol kinase (EC 2.7.1.30) (from data) low > 103
Phaeobacter inhibens DSM 17395 0.40 PGA1_c07350 2-dehydro-3-deoxy-6-phosphogalactonate aldolase DgoA 0.50 PGA1_c32030 glycerol kinase GlpK low > 62
Rhizobium sp. OAE497 0.39 ABIE40_RS05265 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.50 ABIE40_RS13710 glycerol kinase GlpK low > 107
Klebsiella michiganensis M5al 0.39 BWI76_RS03910 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.75 BWI76_RS27515 glycerol kinase low > 92
Caulobacter crescentus NA1000 Δfur 0.38 CCNA_00825 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.44 CCNA_01281 glycerol kinase low > 67
Caulobacter crescentus NA1000 0.38 CCNA_00825 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 0.44 CCNA_01281 glycerol kinase low > 66
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.3079.1 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) 0.63 Xcc-8004.469.1 Glycerol kinase (EC 2.7.1.30) low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.25 Echvi_3770 2-keto-3-deoxy-6-phosphogluconate aldolase 0.59 Echvi_1770 glycerol kinase low > 79
Pontibacter actiniarum KMM 6156, DSM 19842 0.22 CA264_14015 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.58 CA264_11350 glycerol kinase low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.19 CA265_RS19860 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14) (from data) 0.58 CA265_RS07870 glycerol kinase low > 88
Phocaeicola vulgatus CL09T03C04 0.15 HMPREF1058_RS01685 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.46 HMPREF1058_RS02700 glycerol kinase GlpK low > 67
Phocaeicola dorei CL03T12C01 0.15 ABI39_RS15380 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.46 ABI39_RS01980 glycerol kinase GlpK low > 72

Not shown: 3 genomes with orthologs for PS417_00160 only; 35 genomes with orthologs for PS417_05575 only