Conservation of cofitness between EX31_RS12190 and EX31_RS21480 in Rahnella sp. WP5

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rahnella sp. WP5 1.0 EX31_RS12190 50S ribosomal protein L11 methyltransferase 1.0 EX31_RS21480 5-formyltetrahydrofolate cyclo-ligase 0.40 14
Dickeya dianthicola ME23 0.88 DZA65_RS01360 50S ribosomal protein L11 methyltransferase 0.59 DZA65_RS02475 5-formyltetrahydrofolate cyclo-ligase low > 75
Dickeya dianthicola 67-19 0.88 HGI48_RS01300 50S ribosomal protein L11 methyltransferase 0.62 HGI48_RS02370 5-formyltetrahydrofolate cyclo-ligase low > 71
Dickeya dadantii 3937 0.88 DDA3937_RS01380 50S ribosomal protein L11 methyltransferase 0.63 DDA3937_RS02410 5-formyltetrahydrofolate cyclo-ligase low > 74
Serratia liquefaciens MT49 0.87 IAI46_22770 50S ribosomal protein L11 methyltransferase 0.65 IAI46_20895 5-formyltetrahydrofolate cyclo-ligase low > 86
Pectobacterium carotovorum WPP14 0.86 HER17_RS20225 50S ribosomal protein L11 methyltransferase 0.69 HER17_RS19095 5-formyltetrahydrofolate cyclo-ligase low > 75
Pantoea sp. MT58 0.84 IAI47_02390 50S ribosomal protein L11 methyltransferase 0.56 IAI47_03730 5-formyltetrahydrofolate cyclo-ligase low > 76
Erwinia tracheiphila SCR3 0.81 LU632_RS21500 prmA 50S ribosomal protein L11 methyltransferase 0.53 LU632_RS05860 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia coli ECOR38 0.81 HEPCGN_16510 prmA 50S ribosomal protein L11 methyltransferase 0.62 HEPCGN_18775 ygfA 5-formyltetrahydrofolate cyclo-ligase low > 87
Escherichia coli ECRC98 0.81 JDDGAC_21315 prmA 50S ribosomal protein L11 methyltransferase 0.62 JDDGAC_23125 ygfA 5-formyltetrahydrofolate cyclo-ligase low > 86
Escherichia coli ECRC102 0.81 NIAGMN_15450 prmA 50S ribosomal protein L11 methyltransferase 0.62 NIAGMN_17250 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia fergusonii Becca 0.81 EFB2_00565 Ribosomal protein L11 methyltransferase 0.62 EFB2_00991 5-formyltetrahydrofolate cyclo-ligase low > 86
Escherichia coli ECRC99 0.81 KEDOAH_10460 prmA 50S ribosomal protein L11 methyltransferase 0.62 KEDOAH_08655 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.81 OHPLBJKB_00446 Ribosomal protein L11 methyltransferase 0.60 OHPLBJKB_00804 5-formyltetrahydrofolate cyclo-ligase low > 73
Escherichia coli ECRC101 0.81 MCAODC_08210 prmA 50S ribosomal protein L11 methyltransferase 0.62 MCAODC_10005 ygfA 5-formyltetrahydrofolate cyclo-ligase low > 87
Escherichia coli Nissle 1917 0.81 ECOLIN_RS18720 50S ribosomal protein L11 methyltransferase 0.62 ECOLIN_RS16205 5-formyltetrahydrofolate cyclo-ligase low > 55
Escherichia coli BL21 0.81 ECD_03117 methyltransferase for 50S ribosomal subunit protein L11 0.60 ECD_02743 5-formyltetrahydrofolate cyclo-ligase family protein low > 61
Escherichia coli ECRC62 0.81 BNILDI_02045 prmA 50S ribosomal protein L11 methyltransferase 0.62 BNILDI_09930 ygfA 5-formyltetrahydrofolate cyclo-ligase low > 75
Escherichia coli BW25113 0.81 b3259 prmA ribosomal protein L11 methyltransferase (NCBI) 0.60 b2912 ygfA putative ligase (VIMSS) low > 76
Escherichia coli ECRC100 0.81 OKFHMN_17690 prmA 50S ribosomal protein L11 methyltransferase 0.62 OKFHMN_19485 ygfA 5-formyltetrahydrofolate cyclo-ligase low > 80
Escherichia coli ECOR27 0.81 NOLOHH_09475 prmA 50S ribosomal protein L11 methyltransferase 0.62 NOLOHH_11395 ygfA 5-formyltetrahydrofolate cyclo-ligase low > 75
Klebsiella michiganensis M5al 0.81 BWI76_RS25555 50S ribosomal protein L11 methyltransferase 0.60 BWI76_RS23915 5-formyltetrahydrofolate cyclo-ligase 0.20 73
Enterobacter sp. TBS_079 0.79 MPMX20_04167 Ribosomal protein L11 methyltransferase 0.60 MPMX20_03770 5-formyltetrahydrofolate cyclo-ligase low > 85
Enterobacter asburiae PDN3 0.79 EX28DRAFT_3311 ribosomal protein L11 methyltransferase 0.55 EX28DRAFT_2964 5,10-methenyltetrahydrofolate synthetase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.78 GFF2125 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) 0.58 GFF3012 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) low > 78
Vibrio cholerae E7946 ATCC 55056 0.73 CSW01_01500 50S ribosomal protein L11 methyltransferase 0.51 CSW01_12545 5-formyltetrahydrofolate cyclo-ligase low > 62
Shewanella sp. ANA-3 0.69 Shewana3_0400 prmA ribosomal protein L11 methyltransferase (RefSeq) 0.50 Shewana3_3506 5-formyltetrahydrofolate cyclo-ligase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.69 SO0395 prmA ribosomal protein L11 methyltransferase (NCBI ptt file) 0.51 SO0774 5-formyltetrahydrofolate cyclo-ligase family protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.63 Sama_3224 prmA ribosomal protein L11 methyltransferase (RefSeq) 0.41 Sama_2726 5-formyltetrahydrofolate cyclo-ligase family protein (RefSeq) low > 62
Shewanella loihica PV-4 0.61 Shew_0331 prmA ribosomal protein L11 methyltransferase (RefSeq) 0.52 Shew_3069 5-formyltetrahydrofolate cyclo-ligase (RefSeq) low > 60
Pseudomonas stutzeri RCH2 0.57 Psest_1018 ribosomal protein L11 methyltransferase 0.31 Psest_0170 5,10-methenyltetrahydrofolate synthetase low > 67
Pseudomonas sp. S08-1 0.54 OH686_07600 ribosomal protein L11 methyltransferase 0.24 OH686_11225 5-formyltetrahydrofolate cyclo-ligase low > 80
Pseudomonas fluorescens SBW25-INTG 0.52 PFLU_RS03035 50S ribosomal protein L11 methyltransferase 0.27 PFLU_RS28965 5-formyltetrahydrofolate cyclo-ligase low > 109
Pseudomonas fluorescens SBW25 0.52 PFLU_RS03035 50S ribosomal protein L11 methyltransferase 0.27 PFLU_RS28965 5-formyltetrahydrofolate cyclo-ligase low > 109
Pseudomonas simiae WCS417 0.52 PS417_02960 ribosomal protein L11 methyltransferase 0.28 PS417_27305 5-formyltetrahydrofolate cyclo-ligase low > 88
Pseudomonas fluorescens FW300-N2E3 0.52 AO353_13670 ribosomal protein L11 methyltransferase 0.26 AO353_08780 5-formyltetrahydrofolate cyclo-ligase low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.52 Psyr_4402 [LSU ribosomal protein L11P]-lysine N-methyltransferase 0.29 Psyr_0317 5-formyltetrahydrofolate cyclo-ligase low > 86
Pseudomonas fluorescens FW300-N2E2 0.52 Pf6N2E2_3514 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) 0.24 Pf6N2E2_4476 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) low > 103
Pseudomonas putida KT2440 0.52 PP_4818 ribosomal protein L11 methyltransferase 0.25 PP_5203 5-formyltetrahydrofolate cyclo-ligase low > 96
Pseudomonas syringae pv. syringae B728a 0.52 Psyr_4402 [LSU ribosomal protein L11P]-lysine N-methyltransferase 0.29 Psyr_0317 5-formyltetrahydrofolate cyclo-ligase low > 86
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_08205 ribosomal protein L11 methyltransferase 0.24 AO356_12990 5-formyltetrahydrofolate cyclo-ligase low > 104
Kangiella aquimarina DSM 16071 0.51 B158DRAFT_0162 ribosomal protein L11 methyltransferase 0.28 B158DRAFT_0528 5-formyltetrahydrofolate cyclo-ligase low > 40
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_1310 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) 0.25 Pf1N1B4_2225 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) low > 87
Pseudomonas fluorescens GW456-L13 0.51 PfGW456L13_53 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) 0.26 PfGW456L13_892 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) low > 87
Pseudomonas sp. RS175 0.50 PFR28_05218 Ribosomal protein L11 methyltransferase 0.25 PFR28_04325 5-formyltetrahydrofolate cyclo-ligase low > 88
Marinobacter adhaerens HP15 0.48 HP15_3223 ribosomal protein L11 methyltransferase 0.28 HP15_3211 5-formyltetrahydrofolate cyclo-ligase low > 73
Acinetobacter radioresistens SK82 0.43 MPMX26_01144 Ribosomal protein L11 methyltransferase 0.24 MPMX26_02298 5-formyltetrahydrofolate cyclo-ligase low > 36
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS17065 50S ribosomal protein L11 methyltransferase 0.16 ABZR86_RS11995 5-formyltetrahydrofolate cyclo-ligase low > 74
Rhodanobacter denitrificans MT42 0.41 LRK55_RS06555 50S ribosomal protein L11 methyltransferase 0.19 LRK55_RS11395 5-formyltetrahydrofolate cyclo-ligase low > 63
Rhodanobacter denitrificans FW104-10B01 0.41 LRK54_RS06810 50S ribosomal protein L11 methyltransferase 0.19 LRK54_RS11670 5-formyltetrahydrofolate cyclo-ligase low > 59
Rhodanobacter sp. FW510-T8 0.39 OKGIIK_16820 prmA 50S ribosomal protein L11 methyltransferase 0.20 OKGIIK_12225 5-formyltetrahydrofolate cyclo-ligase low > 52
Paraburkholderia sabiae LMG 24235 0.39 QEN71_RS27175 50S ribosomal protein L11 methyltransferase 0.15 QEN71_RS28640 5-formyltetrahydrofolate cyclo-ligase low > 153
Lysobacter sp. OAE881 0.38 ABIE51_RS17745 50S ribosomal protein L11 methyltransferase 0.23 ABIE51_RS17355 5-formyltetrahydrofolate cyclo-ligase low > 62
Ralstonia sp. UNC404CL21Col 0.37 ABZR87_RS01660 50S ribosomal protein L11 methyltransferase 0.15 ABZR87_RS04880 5-formyltetrahydrofolate cyclo-ligase low > 80
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS01920 50S ribosomal protein L11 methyltransferase 0.17 HSERO_RS21420 5-formyltetrahydrofolate cyclo-ligase low > 78
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS17705 ribosomal protein L11 methyltransferase 0.13 RR42_RS01400 5-formyltetrahydrofolate cyclo-ligase low > 128
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.675.1 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) 0.23 Xcc-8004.1138.1 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) low > 74
Castellaniella sp019104865 MT123 0.31 ABCV34_RS10670 50S ribosomal protein L11 methyltransferase 0.15 ABCV34_RS13555 5-formyltetrahydrofolate cyclo-ligase — —
Sphingomonas koreensis DSMZ 15582 0.18 Ga0059261_1324 [LSU ribosomal protein L11P]-lysine N-methyltransferase (EC 2.1.1.-) 0.19 Ga0059261_0735 5,10-methenyltetrahydrofolate synthetase low > 68

Not shown: 13 genomes with orthologs for EX31_RS12190 only; 20 genomes with orthologs for EX31_RS21480 only