| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Rahnella sp. WP5 | 1.0 | EX31_RS21460 | | LysR family transcriptional regulator ArgP | 1.0 | EX31_RS07900 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.81 | 5 |
| Serratia liquefaciens MT49 | 0.93 | IAI46_20910 | | LysR family transcriptional regulator ArgP | 0.87 | IAI46_03690 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | low | > 86 |
| Pantoea sp. MT58 | 0.92 | IAI47_03715 | | LysR family transcriptional regulator ArgP | 0.84 | IAI47_04155 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.43 | 32 |
| Pectobacterium carotovorum WPP14 | 0.92 | HER17_RS02715 | | LysR family transcriptional regulator ArgP | 0.86 | HER17_RS04240 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.70 | 49 |
| Dickeya dadantii 3937 | 0.91 | DDA3937_RS18490 | | LysR family transcriptional regulator ArgP | 0.86 | DDA3937_RS16940 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.84 | 28 |
| Enterobacter sp. TBS_079 | 0.91 | MPMX20_03773 | | HTH-type transcriptional regulator ArgP | 0.83 | MPMX20_03642 | | Sulfite reductase [NADPH] hemoprotein beta-component | low | > 85 |
| Enterobacter asburiae PDN3 | 0.91 | EX28DRAFT_2967 | | transcriptional regulator, ArgP family | 0.82 | EX28DRAFT_2852 | | sulfite reductase (NADPH) hemoprotein, beta-component | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.91 | LU632_RS05845 | | LysR family transcriptional regulator ArgP | 0.83 | LU632_RS06405 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.54 | 27 |
| Dickeya dianthicola ME23 | 0.91 | DZA65_RS19550 | | LysR family transcriptional regulator ArgP | 0.86 | DZA65_RS18085 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.57 | 37 |
| Dickeya dianthicola 67-19 | 0.91 | HGI48_RS18415 | | LysR family transcriptional regulator ArgP | 0.86 | HGI48_RS17010 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.80 | 18 |
| Klebsiella michiganensis M5al | 0.91 | BWI76_RS23930 | | transcriptional regulator ArgP | 0.82 | BWI76_RS22760 | | sulfite reductase subunit beta | 0.34 | 54 |
| Escherichia coli BW25113 | 0.90 | b2916 | argP | chromosome replication initiation inhibitor protein (NCBI) | 0.82 | b2763 | cysI | sulfite reductase, beta subunit, NAD(P)-binding, heme-binding (NCBI) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.90 | ECOLIN_RS16225 | | DNA-binding transcriptional regulator ArgP | 0.82 | ECOLIN_RS15405 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | — | — |
| Escherichia coli BL21 | 0.90 | ECD_02747 | | transcriptional regulator for arginine transport and DNA replication genes; replication initiation inhibitor | 0.82 | ECD_02608 | | sulfite reductase, beta subunit, NAD(P)-binding, heme-binding | low | > 61 |
| Escherichia coli ECOR27 | 0.90 | NOLOHH_11355 | argP | DNA-binding transcriptional regulator ArgP | 0.82 | NOLOHH_12190 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | low | > 75 |
| Escherichia fergusonii Becca | 0.90 | EFB2_00987 | | HTH-type transcriptional regulator ArgP | 0.82 | EFB2_01154 | | Sulfite reductase [NADPH] hemoprotein beta-component | low | > 86 |
| Escherichia coli ECRC99 | 0.90 | KEDOAH_08690 | argP | DNA-binding transcriptional regulator ArgP | 0.82 | KEDOAH_07750 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | — | — |
| Escherichia coli ECRC98 | 0.90 | JDDGAC_23090 | argP | DNA-binding transcriptional regulator ArgP | 0.82 | JDDGAC_24040 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | low | > 86 |
| Escherichia coli ECRC101 | 0.90 | MCAODC_09970 | argP | DNA-binding transcriptional regulator ArgP | 0.82 | MCAODC_10900 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | low | > 87 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.90 | GFF3015 | | Chromosome initiation inhibitor | 0.82 | GFF4819 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | low | > 78 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.90 | OHPLBJKB_00800 | | HTH-type transcriptional regulator ArgP | 0.82 | OHPLBJKB_00970 | | Sulfite reductase [NADPH] hemoprotein beta-component | low | > 73 |
| Escherichia coli ECRC62 | 0.90 | BNILDI_09890 | argP | DNA-binding transcriptional regulator ArgP | 0.82 | BNILDI_10740 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | low | > 75 |
| Escherichia coli ECOR38 | 0.90 | HEPCGN_18750 | argP | DNA-binding transcriptional regulator ArgP | 0.82 | HEPCGN_19090 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | low | > 87 |
| Escherichia coli ECRC102 | 0.90 | NIAGMN_17215 | argP | DNA-binding transcriptional regulator ArgP | 0.82 | NIAGMN_18145 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | — | — |
| Escherichia coli ECRC100 | 0.90 | OKFHMN_19450 | argP | DNA-binding transcriptional regulator ArgP | 0.82 | OKFHMN_20375 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | low | > 80 |
| Vibrio cholerae E7946 ATCC 55056 | 0.46 | CSW01_02560 | | chromosome initiation inhibitor | 0.75 | CSW01_02015 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | low | > 62 |
| Shewanella amazonensis SB2B | 0.39 | Sama_2987 | | chromosome replication initiation inhibitor protein (RefSeq) | 0.72 | Sama_2838 | | sulfite reductase subunit beta (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.34 | Shew_1844 | | chromosome replication initiation inhibitor protein (RefSeq) | 0.58 | Shew_0666 | | sulfite reductase subunit beta (RefSeq) | low | > 60 |
| Shewanella oneidensis MR-1 | 0.33 | SO2866 | iciA | chromosome initiation inhibitor (NCBI ptt file) | 0.57 | SO3737 | cysI | sulfite reductase (NADPH) hemoprotein beta-component (cysI) (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.33 | Shewana3_1652 | | chromosome replication initiation inhibitor protein (RefSeq) | 0.58 | Shewana3_0856 | | sulfite reductase subunit beta (RefSeq) | low | > 73 |
| Pseudomonas fluorescens FW300-N2C3 | 0.30 | AO356_04995 | | LysR family transcriptional regulator | 0.07 | AO356_00555 | | sulfite reductase | low | > 104 |
| Pseudomonas sp. RS175 | 0.30 | PFR28_00608 | | HTH-type transcriptional regulator ArgP | 0.07 | PFR28_01366 | | Sulfite reductase [ferredoxin] | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.30 | Pf1N1B4_708 | | Chromosome initiation inhibitor | 0.08 | Pf1N1B4_4656 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | low | > 87 |
| Pseudomonas simiae WCS417 | 0.30 | PS417_22165 | | LysR family transcriptional regulator | 0.07 | PS417_12290 | | sulfite reductase | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.30 | PfGW456L13_1782 | | Chromosome initiation inhibitor | 0.08 | PfGW456L13_3285 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.30 | AO353_03915 | | LysR family transcriptional regulator | 0.07 | AO353_22800 | | sulfite reductase | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.30 | Pf6N2E2_2849 | | Chromosome initiation inhibitor | 0.07 | Pf6N2E2_2073 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | low | > 103 |
| Pseudomonas fluorescens SBW25 | 0.29 | PFLU_RS23790 | | LysR family transcriptional regulator ArgP | 0.07 | PFLU_RS12980 | | nitrite/sulfite reductase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.29 | PFLU_RS23790 | | LysR family transcriptional regulator ArgP | 0.07 | PFLU_RS12980 | | nitrite/sulfite reductase | low | > 109 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.29 | Psyr_4057 | | regulatory protein, LysR:LysR, substrate-binding protein | 0.07 | Psyr_2462 | | Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.29 | Psyr_4057 | | regulatory protein, LysR:LysR, substrate-binding protein | 0.07 | Psyr_2462 | | Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region | low | > 86 |
| Dyella japonica UNC79MFTsu3.2 | 0.28 | ABZR86_RS10990 | | LysR family transcriptional regulator ArgP | 0.48 | ABZR86_RS05900 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | low | > 74 |
| Pseudomonas putida KT2440 | 0.27 | PP_0917 | | Chromosome initiation inhibitor | 0.07 | PP_2371 | | Sulphite reductase hemoprotein, beta subunit | low | > 96 |
| Rhodanobacter sp. FW510-T8 | 0.27 | OKGIIK_01770 | | Transcriptional regulator ArgP | 0.45 | OKGIIK_05965 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | low | > 52 |
| Acidovorax sp. GW101-3H11 | 0.27 | Ac3H11_4846 | | Transcriptional regulator | 0.06 | Ac3H11_577 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | low | > 79 |
| Ralstonia solanacearum IBSBF1503 | 0.27 | RALBFv3_RS18360 | | transcriptional regulator ArgP | 0.07 | RALBFv3_RS04600 | | sulfite reductase | low | > 76 |
| Ralstonia solanacearum UW163 | 0.27 | UW163_RS20770 | | transcriptional regulator ArgP | 0.07 | UW163_RS09070 | | sulfite reductase | — | — |
| Azospirillum sp. SherDot2 | 0.27 | MPMX19_01759 | | putative HTH-type transcriptional regulator | 0.08 | MPMX19_00652 | | Sulfite reductase [ferredoxin] | low | > 112 |
| Ralstonia sp. UNC404CL21Col | 0.27 | ABZR87_RS14025 | | LysR family transcriptional regulator ArgP | 0.07 | ABZR87_RS00210 | | nitrite/sulfite reductase | low | > 80 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.26 | Xcc-8004.1463.1 | | Transcriptional regulator lysR family | 0.43 | Xcc-8004.1257.1 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | low | > 74 |
| Agrobacterium fabrum C58 | 0.26 | Atu0928 | | transcriptional regulator, LysR family | 0.06 | Atu1456 | | sulfite reductase (NADPH) hemoprotein beta-component | low | > 89 |
| Ralstonia solanacearum PSI07 | 0.25 | RPSI07_RS03900 | | transcriptional regulator ArgP | 0.07 | RPSI07_RS12775 | | nitrite/sulfite reductase | low | > 81 |
| Alteromonas macleodii MIT1002 | 0.25 | MIT1002_00129 | | OriC replication inhibitor | 0.77 | MIT1002_03379 | | Sulfite reductase [NADPH] hemoprotein beta-component | — | — |
| Burkholderia phytofirmans PsJN | 0.25 | BPHYT_RS07440 | | LysR family transcriptional regulator | 0.06 | BPHYT_RS04725 | | sulfite reductase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.25 | H281DRAFT_04882 | | transcriptional regulator, LysR family | 0.06 | H281DRAFT_00114 | | sulfite reductase (NADPH) beta subunit | — | — |
| Rhodospirillum rubrum S1H | 0.25 | Rru_A0658 | | Transcriptional Regulator, LysR family (NCBI) | 0.08 | Rru_A1931 | | Ferredoxin--nitrite reductase (NCBI) | — | — |
| Paraburkholderia graminis OAS925 | 0.24 | ABIE53_001719 | | LysR family transcriptional regulator (chromosome initiation inhibitor) | 0.07 | ABIE53_001226 | | sulfite reductase (NADPH) hemoprotein beta-component | low | > 113 |
| Cupriavidus basilensis FW507-4G11 | 0.24 | RR42_RS31465 | | LysR family transcriptional regulator | 0.06 | RR42_RS16270 | | sulfite reductase | low | > 128 |
| Mycobacterium tuberculosis H37Rv | 0.24 | Rv1985c | | Probable transcriptional regulatory protein (probably LysR-family) | 0.10 | Rv2391 | | Ferredoxin-dependent sulfite reductase SirA | — | — |
| Phaeobacter inhibens DSM 17395 | 0.23 | PGA1_c21740 | | transcriptional regulator, ArgP family | 0.07 | PGA1_c20760 | | putative nitrite/sulfite reductase | — | — |
| Variovorax sp. SCN45 | 0.21 | GFF2318 | | Transcriptional regulator ArgP, LysR family | 0.06 | GFF1206 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | low | > 127 |
Not shown: 10 genomes with orthologs for EX31_RS21460 only; 13 genomes with orthologs for EX31_RS07900 only