| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Enterobacter asburiae PDN3 | 1.0 | EX28DRAFT_1683 | | cysteine desulfurases, SufSfamily | 1.0 | EX28DRAFT_0039 | | 16S rRNA (cytosine(967)-C(5))-methyltransferase | 0.85 | 19 |
| Enterobacter sp. TBS_079 | 0.96 | MPMX20_01947 | | Cysteine desulfurase | 0.95 | MPMX20_04196 | | Ribosomal RNA small subunit methyltransferase B | low | > 85 |
| Escherichia coli Nissle 1917 | 0.85 | ECOLIN_RS09395 | | cysteine desulfurase SufS | 0.89 | ECOLIN_RS18875 | | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | — | — |
| Escherichia coli ECRC62 | 0.85 | BNILDI_16580 | sufS | cysteine desulfurase SufS | 0.89 | BNILDI_02200 | rsmB | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.85 | OHPLBJKB_02044 | | Cysteine desulfurase | 0.89 | OHPLBJKB_00415 | | Ribosomal RNA small subunit methyltransferase B | low | > 74 |
| Escherichia coli BL21 | 0.85 | ECD_01649 | | cysteine desulfurase, stimulated by SufE; selenocysteine lyase, PLP-dependent | 0.89 | ECD_03139 | | 16S rRNA m(5)C967 methyltransferase, SAM-dependent | low | > 61 |
| Escherichia coli ECRC99 | 0.85 | KEDOAH_00840 | sufS | cysteine desulfurase SufS | 0.89 | KEDOAH_10620 | rsmB | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | — | — |
| Escherichia coli ECRC98 | 0.85 | JDDGAC_01845 | sufS | cysteine desulfurase SufS | 0.89 | JDDGAC_21150 | rsmB | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | low | > 87 |
| Escherichia coli ECRC100 | 0.85 | OKFHMN_27270 | sufS | cysteine desulfurase SufS | 0.89 | OKFHMN_17520 | rsmB | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | low | > 79 |
| Escherichia coli BW25113 | 0.85 | b1680 | sufS | selenocysteine lyase (NCBI) | 0.89 | b3289 | rsmB | 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI) | low | > 76 |
| Escherichia coli ECOR27 | 0.85 | NOLOHH_17790 | sufS | cysteine desulfurase SufS | 0.89 | NOLOHH_09320 | rsmB | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | low | > 76 |
| Escherichia coli ECRC101 | 0.85 | MCAODC_18140 | sufS | cysteine desulfurase SufS | 0.89 | MCAODC_08050 | rsmB | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | low | > 87 |
| Escherichia coli ECRC102 | 0.85 | NIAGMN_00795 | sufS | cysteine desulfurase SufS | 0.89 | NIAGMN_15290 | rsmB | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | low | > 80 |
| Escherichia fergusonii Becca | 0.85 | EFB2_02312 | | Cysteine desulfurase | 0.89 | EFB2_00535 | | Ribosomal RNA small subunit methyltransferase B | low | > 86 |
| Escherichia coli ECOR38 | 0.85 | HEPCGN_05655 | sufS | cysteine desulfurase SufS | 0.89 | HEPCGN_16350 | rsmB | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | low | > 88 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.84 | GFF3562 | | Cysteine desulfurase (EC 2.8.1.7), SufS subfamily | 0.87 | GFF2390 | | 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 | low | > 78 |
| Klebsiella michiganensis M5al | 0.83 | BWI76_RS16980 | | bifunctional cysteine desulfurase/selenocysteine lyase | 0.88 | BWI76_RS25680 | | 16S rRNA m5C967 methyltransferase | low | > 92 |
| Klebsiella pneumoniae MKP103 | 0.81 | KDGMDA_24150 | | cysteine desulfurase SufS | 0.87 | KDGMDA_06550 | | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | low | > 95 |
| Serratia liquefaciens MT49 | 0.75 | IAI46_11165 | | cysteine desulfurase SufS | 0.75 | IAI46_23275 | | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | low | > 87 |
| Pectobacterium carotovorum WPP14 | 0.75 | HER17_RS08940 | | cysteine desulfurase SufS | 0.73 | HER17_RS02215 | | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | low | > 75 |
| Erwinia amylovora T8 | 0.74 | OLJFJH_14575 | | cysteine desulfurase SufS | 0.74 | OLJFJH_03720 | | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | — | — |
| Rahnella sp. WP5 | 0.73 | EX31_RS13890 | | cysteine desulfurase SufS | 0.72 | EX31_RS15985 | | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | — | — |
| Dickeya dadantii 3937 | 0.73 | DDA3937_RS12760 | | cysteine desulfurase SufS | 0.75 | DDA3937_RS19135 | | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | low | > 74 |
| Dickeya dianthicola ME23 | 0.72 | DZA65_RS13290 | | cysteine desulfurase SufS | 0.74 | DZA65_RS20350 | | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | low | > 75 |
| Dickeya dianthicola 67-19 | 0.72 | HGI48_RS12825 | | cysteine desulfurase SufS | 0.74 | HGI48_RS19225 | | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | low | > 71 |
| Pantoea agglomerans CFBP13505 P0401 | 0.72 | PagCFBP13505_RS17730 | | cysteine desulfurase SufS | 0.70 | PagCFBP13505_RS22525 | | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | — | — |
| Pantoea sp. MT58 | 0.72 | IAI47_10860 | | cysteine desulfurase SufS | 0.71 | IAI47_02280 | | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | — | — |
| Erwinia tracheiphila HP pepo 2.2 | 0.71 | IJEDHG_25280 | sufS | cysteine desulfurase SufS | 0.72 | IJEDHG_12470 | rsmB | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | — | — |
| Erwinia tracheiphila SCR3 | 0.71 | LU632_RS11075 | sufS | cysteine desulfurase SufS | 0.72 | LU632_RS22480 | rsmB | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.53 | AO353_24935 | | cysteine sulfinate desulfinase | 0.42 | AO353_10630 | | 16S rRNA methyltransferase | low | > 101 |
| Castellaniella sp019104865 MT123 | 0.50 | ABCV34_RS04680 | | cysteine desulfurase | 0.31 | ABCV34_RS14225 | | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | — | — |
| Marinobacter adhaerens HP15 | 0.49 | HP15_2987 | | cysteine desulfurase, SufS subfamily | 0.40 | HP15_3742 | | Fmu, rRNA SAM-dependent methyltransferase | — | — |
| Azospirillum brasilense Sp245 | 0.49 | AZOBR_RS14845 | | cysteine desulfurase | 0.22 | AZOBR_RS00235 | | MFS transporter | — | — |
| Lysobacter sp. OAE881 | 0.48 | ABIE51_RS15745 | | cysteine desulfurase | 0.35 | ABIE51_RS02255 | | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | — | — |
| Rhodospirillum rubrum S1H | 0.48 | Rru_A2570 | | Cysteine desulphurases, SufS (NCBI) | 0.21 | Rru_A3660 | | tRNA and rRNA cytosine-C5-methylase (NCBI) | — | — |
| Xanthobacter sp. DMC5 | 0.48 | GFF4589 | | Cysteine desulfurase | 0.24 | GFF3851 | | Ribosomal RNA small subunit methyltransferase B | — | — |
| Azospirillum sp. SherDot2 | 0.48 | MPMX19_04833 | | Cysteine desulfurase | 0.22 | MPMX19_02327 | | Ribosomal RNA small subunit methyltransferase B | — | — |
| Alteromonas macleodii MIT1002 | 0.48 | MIT1002_02797 | | putative cysteine desulfurase | 0.42 | MIT1002_00018 | | Ribosomal RNA small subunit methyltransferase B | — | — |
| Sphingobium sp. HT1-2 | 0.47 | GFF970 | | Cysteine desulfurase (EC 2.8.1.7) => SufS | 0.20 | GFF3272 | | 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) | — | — |
| Synechocystis sp000284455 PCC 6803 | 0.47 | SGL_RS15265 | | SufS family cysteine desulfurase | 0.24 | SGL_RS03855 | | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | — | — |
| Rhodanobacter sp000427505 FW510-R12 | 0.47 | LRK53_RS06890 | | cysteine desulfurase | 0.28 | LRK53_RS02905 | | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | — | — |
| Caulobacter crescentus NA1000 | 0.47 | CCNA_01936 | | cysteine desulfurase/selenocysteine lyase | 0.21 | CCNA_00101 | | 16S rRNA m5C methyltransferase RsmB | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.47 | CCNA_01936 | | cysteine desulfurase/selenocysteine lyase | 0.21 | CCNA_00101 | | 16S rRNA m5C methyltransferase RsmB | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.47 | ABZR86_RS09460 | | cysteine desulfurase | 0.32 | ABZR86_RS13890 | | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | — | — |
| Rhodanobacter sp. FW510-T8 | 0.47 | OKGIIK_09950 | sufS,csdA | cysteine desulfurase CsdA | 0.32 | OKGIIK_13790 | rsmB | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.46 | LRK54_RS03080 | | cysteine desulfurase | 0.29 | LRK54_RS10125 | | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | — | — |
| Rhodanobacter denitrificans MT42 | 0.46 | LRK55_RS02830 | | cysteine desulfurase | 0.29 | LRK55_RS09765 | | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.46 | A4249_RS04590 | | cysteine desulfurase | 0.17 | A4249_RS13165 | | RsmB/NOP family class I SAM-dependent RNA methyltransferase | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.46 | Xcc-8004.1697.1 | | Cysteine desulfurase (EC 2.8.1.7), SufS subfamily | 0.32 | Xcc-8004.4741.1 | | hypothetical protein | — | — |
| Shewanella oneidensis MR-1 | 0.45 | SO3789 | | aminotransferase, class V (NCBI ptt file) | 0.47 | SO0030 | sun | sun protein (NCBI ptt file) | low | > 76 |
| Sphingomonas koreensis DSMZ 15582 | 0.45 | Ga0059261_1475 | | cysteine desulfurases, SufSfamily | 0.17 | Ga0059261_2239 | | tRNA and rRNA cytosine-C5-methylases | — | — |
| Agrobacterium fabrum C58 | 0.45 | Atu1821 | | cysteine desulfurase | 0.20 | Atu2825 | | Sun protein | — | — |
| Rhizobium sp. OAE497 | 0.45 | ABIE40_RS09990 | | cysteine desulfurase | 0.22 | ABIE40_RS19140 | | RsmB/NOP family class I SAM-dependent RNA methyltransferase | — | — |
| Shewanella loihica PV-4 | 0.45 | Shew_0735 | | SufS subfamily cysteine desulfurase (RefSeq) | 0.48 | Shew_3738 | | sun protein (RefSeq) | low | > 60 |
| Bosea sp. OAE506 | 0.44 | ABIE41_RS16975 | | cysteine desulfurase | 0.21 | ABIE41_RS05105 | | RsmB/NOP family class I SAM-dependent RNA methyltransferase | — | — |
| Phaeobacter inhibens DSM 17395 | 0.44 | PGA1_c15430 | | cysteine desulfurase SufS | 0.18 | PGA1_c32880 | | putative ribosomal RNA small subunit methyltransferase B | — | — |
| Dinoroseobacter shibae DFL-12 | 0.44 | Dshi_1623 | | cysteine desulfurase, SufS subfamily (RefSeq) | 0.20 | Dshi_3033 | | Fmu (Sun) domain protein (RefSeq) | — | — |
| Shewanella sp. ANA-3 | 0.44 | Shewana3_0808 | | cysteine desulfurase (RefSeq) | 0.48 | Shewana3_0033 | | sun protein (RefSeq) | low | > 73 |
| Mycobacterium tuberculosis H37Rv | 0.43 | Rv1464 | | Probable cysteine desulfurase Csd | 0.15 | Rv1407 | | Probable Fmu protein (sun protein) | — | — |
| Shewanella amazonensis SB2B | 0.42 | Sama_2777 | | aminotransferase, class V (RefSeq) | 0.48 | Sama_0041 | | sun protein (RefSeq) | low | > 62 |
| Pseudomonas aeruginosa MRSN321 | 0.37 | DY961_RS14640 | | cysteine desulfurase | 0.44 | DY961_RS26285 | rsmB;go_function=RNA | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | low | > 100 |
| Pseudomonas aeruginosa PA14 | 0.37 | IKLFDK_18725 | | putative cysteine desulfurase | 0.44 | IKLFDK_25475 | | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | low | > 98 |
| Pseudomonas aeruginosa PUPa3 | 0.37 | DQ20_RS42485 | | cysteine desulfurase | 0.44 | DQ20_RS58690 | rsmB;go_function=RNA | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | low | > 101 |
| Pseudomonas sp. RS175 | 0.34 | PFR28_00389 | | Cysteine desulfurase SufS | 0.42 | PFR28_04663 | | Ribosomal RNA small subunit methyltransferase B | low | > 88 |
| Cupriavidus basilensis FW507-4G11 | 0.21 | RR42_RS21580 | | cysteine desulfurase | 0.30 | RR42_RS20450 | | 16S rRNA methyltransferase | low | > 128 |
| Paraburkholderia sabiae LMG 24235 | 0.13 | QEN71_RS41165 | | aminotransferase class V-fold PLP-dependent enzyme | 0.32 | QEN71_RS00175 | | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | low | > 153 |
Not shown: 11 genomes with orthologs for EX28DRAFT_1683 only; 43 genomes with orthologs for EX28DRAFT_0039 only