Conservation of cofitness between ECD_00877 and ECD_03883 in Escherichia coli BL21

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00877 HCP oxidoreductase, NADH-dependent 1.0 ECD_03883 IMP cyclohydrolase and phosphoribosylaminoimidazolecarboxamide formyltransferase low > 61
Escherichia coli ECOR27 1.00 NOLOHH_22235 hcr NADH oxidoreductase 1.00 NOLOHH_05455 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 75
Escherichia coli BW25113 1.00 b0872 hcr HCP oxidoreductase, NADH-dependent (NCBI) 1.00 b4006 purH bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (NCBI) low > 76
Escherichia coli ECRC62 1.00 BNILDI_20490 hcr NADH oxidoreductase 0.99 BNILDI_06065 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 75
Escherichia coli Nissle 1917 0.99 ECOLIN_RS04640 NADH oxidoreductase 0.99 ECOLIN_RS23100 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 55
Escherichia fergusonii Becca 0.99 EFB2_03189 NADH oxidoreductase HCR 0.99 EFB2_04604 Bifunctional purine biosynthesis protein PurH low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_02796 NADH oxidoreductase HCR 0.99 OHPLBJKB_04043 Bifunctional purine biosynthesis protein PurH low > 73
Escherichia coli ECOR38 0.99 HEPCGN_02175 hcr NADH oxidoreductase 0.99 HEPCGN_11950 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 87
Escherichia coli ECRC102 0.99 NIAGMN_03880 hcr NADH oxidoreductase 1.00 NIAGMN_11060 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Escherichia coli ECRC98 0.99 JDDGAC_09475 hcr NADH oxidoreductase 1.00 JDDGAC_16935 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 86
Escherichia coli ECRC100 0.99 OKFHMN_05840 hcr NADH oxidoreductase 1.00 OKFHMN_13310 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 80
Escherichia coli ECRC101 0.99 MCAODC_25055 hcr NADH oxidoreductase 1.00 MCAODC_03810 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 87
Escherichia coli ECRC99 0.99 KEDOAH_22070 hcr NADH oxidoreductase 1.00 KEDOAH_14850 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF4910 NADH oxidoreductase hcr (EC 1.-.-.-) 0.96 GFF4186 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) low > 78
Enterobacter sp. TBS_079 0.91 MPMX20_01534 NADH oxidoreductase HCR 0.94 MPMX20_00226 Bifunctional purine biosynthesis protein PurH low > 85
Klebsiella michiganensis M5al 0.91 BWI76_RS09565 hybrid-cluster NAD(P)-dependent oxidoreductase 0.94 BWI76_RS01615 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase low > 92
Enterobacter asburiae PDN3 0.89 EX28DRAFT_2060 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 0.94 EX28DRAFT_4545 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Pectobacterium carotovorum WPP14 0.62 HER17_RS12430 NADH oxidoreductase 0.90 HER17_RS20335 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 75
Serratia liquefaciens MT49 0.59 IAI46_08470 NADH oxidoreductase 0.89 IAI46_01365 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 86
Dickeya dadantii 3937 0.59 DDA3937_RS09535 NADH oxidoreductase 0.91 DDA3937_RS01220 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 74
Dickeya dianthicola 67-19 0.57 HGI48_RS09550 NADH oxidoreductase 0.90 HGI48_RS01215 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 71
Dickeya dianthicola ME23 0.57 DZA65_RS09860 NADH oxidoreductase 0.90 DZA65_RS01260 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 75
Rahnella sp. WP5 0.53 EX31_RS18595 NADH oxidoreductase 0.88 EX31_RS16860 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 89
Shewanella sp. ANA-3 0.27 Shewana3_3010 oxidoreductase FAD-binding subunit (RefSeq) 0.74 Shewana3_0441 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (RefSeq) low > 73
Shewanella loihica PV-4 0.27 Shew_1070 oxidoreductase FAD-binding subunit (RefSeq) 0.77 Shew_3412 purH bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.27 SO1364 iron-sulfur cluster-binding protein (NCBI ptt file) 0.73 SO0442 purH phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.26 Sama_0896 iron-sulfur cluster-binding protein (RefSeq) 0.76 Sama_0395 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (RefSeq) low > 62
Ralstonia solanacearum GMI1000 0.23 RS_RS17500 hybrid-cluster NAD(P)-dependent oxidoreductase 0.59 RS_RS02505 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase
Sinorhizobium meliloti 1021 0.23 SMc00981 ferredoxin protein 0.47 SMc04088 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 103
Paraburkholderia sabiae LMG 24235 0.22 QEN71_RS08350 hybrid-cluster NAD(P)-dependent oxidoreductase 0.60 QEN71_RS26780 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 153
Pseudomonas simiae WCS417 0.22 PS417_26215 ferredoxin 0.69 PS417_02940 phosphoribosylaminoimidazolecarboxamide formyltransferase
Pseudomonas fluorescens SBW25-INTG 0.22 PFLU_RS27860 glycine-betaine demethylase subunit GbcB 0.69 PFLU_RS03015 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH
Pseudomonas fluorescens SBW25 0.22 PFLU_RS27860 glycine-betaine demethylase subunit GbcB 0.69 PFLU_RS03015 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH low > 109
Paraburkholderia graminis OAS925 0.21 ABIE53_006130 ferredoxin-NADP reductase 0.61 ABIE53_003491 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Pseudomonas fluorescens GW456-L13 0.21 PfGW456L13_1112 GbcB Glycine betaine demethylase subunit B 0.69 PfGW456L13_57 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_00630 ferredoxin 0.69 AO356_08225 phosphoribosylaminoimidazolecarboxamide formyltransferase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_4775 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region 0.68 Psyr_4406 IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase
Pseudomonas fluorescens FW300-N2E3 0.21 AO353_07675 ferredoxin 0.69 AO353_13650 phosphoribosylaminoimidazolecarboxamide formyltransferase
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS25220 ferredoxin oxidoreductase 0.60 BPHYT_RS16595 bifunctional purine biosynthesis protein PurH
Pseudomonas sp. RS175 0.21 PFR28_04139 3-ketosteroid-9-alpha-monooxygenase, ferredoxin reductase component 0.69 PFR28_05214 Bifunctional purine biosynthesis protein PurH
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_02476 Ferredoxin-NADP reductase 0.61 H281DRAFT_04251 IMP cyclohydrolase /phosphoribosylaminoimidazolecarboxamide formyltransferase
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_4714 GbcB Glycine betaine demethylase subunit B 0.69 Pf6N2E2_3519 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_4775 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region 0.68 Psyr_4406 IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase
Pseudomonas putida KT2440 0.21 PP_0316 putative glycine-betaine dioxygenase subunit 0.68 PP_4822 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Pseudomonas fluorescens FW300-N1B4 0.21 Pf1N1B4_2448 GbcB Glycine betaine demethylase subunit B 0.70 Pf1N1B4_1315 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) low > 87
Agrobacterium fabrum C58 0.20 Atu0727 ferredoxin I 0.46 Atu2823 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Azospirillum sp. SherDot2 0.20 MPMX19_04719 3-ketosteroid-9-alpha-monooxygenase, ferredoxin reductase component 0.54 MPMX19_02325 Bifunctional purine biosynthesis protein PurH
Echinicola vietnamensis KMM 6221, DSM 17526 0.19 Echvi_0363 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 0.33 Echvi_1469 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Pseudomonas sp. S08-1 0.19 OH686_04175 Flavodoxin (ferredoxin-NADPH reductases) family 1 0.69 OH686_07620 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Phaeobacter inhibens DSM 17395 0.17 PGA1_c25310 putative NADH oxidoreductase 0.52 PGA1_c32860 bifunctional purine biosynthesis protein PurH
Pedobacter sp. GW460-11-11-14-LB5 0.16 CA265_RS25075 phenylacetic acid degradation protein 0.37 CA265_RS02705 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Mucilaginibacter yixingensis YX-36 DSM 26809 0.16 ABZR88_RS20745 ferredoxin--NADP reductase 0.35 ABZR88_RS16970 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Cupriavidus basilensis FW507-4G11 0.16 RR42_RS23745 phenylacetic acid degradation protein 0.59 RR42_RS02720 phosphoribosylaminoimidazolecarboxamide formyltransferase
Acinetobacter radioresistens SK82 0.15 MPMX26_01556 1,2-phenylacetyl-CoA epoxidase, subunit E 0.69 MPMX26_01141 Bifunctional purine biosynthesis protein PurH
Rhodopseudomonas palustris CGA009 0.15 TX73_019490 phenylacetate-CoA oxygenase/reductase subunit PaaK 0.52 TX73_000145 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Herbaspirillum seropedicae SmR1 0.15 HSERO_RS20630 phenylacetic acid degradation protein 0.58 HSERO_RS02060 purine biosynthesis protein purH
Marinobacter adhaerens HP15 0.15 HP15_2701 phenylacetic acid degradation oxidoreductase PaaK 0.72 HP15_3227 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Variovorax sp. SCN45 0.14 GFF6097 1,2-phenylacetyl-CoA epoxidase, subunit E (EC 1.14.13.149) 0.55 GFF2146 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)
Ralstonia solanacearum PSI07 0.14 RPSI07_RS02150 phenylacetate-CoA oxygenase/reductase subunit PaaK 0.59 RPSI07_RS21530 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH
Ralstonia solanacearum UW163 0.14 UW163_RS18535 phenylacetate-CoA oxygenase/reductase subunit PaaK 0.59 UW163_RS01900 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH
Ralstonia solanacearum IBSBF1503 0.14 RALBFv3_RS20640 phenylacetate-CoA oxygenase/reductase subunit PaaK 0.59 RALBFv3_RS11685 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH
Variovorax sp. OAS795 0.13 ABID97_RS22805 1,2-phenylacetyl-CoA epoxidase subunit PaaE 0.55 ABID97_RS24725 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Dinoroseobacter shibae DFL-12 0.13 Dshi_3822 phenylacetate-CoA oxygenase/reductase, PaaK subunit (RefSeq) 0.50 Dshi_0358 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (RefSeq)
Hydrogenophaga sp. GW460-11-11-14-LB1 0.13 GFF1689 Phenylacetate-CoA oxygenase/reductase, PaaK subunit 0.56 GFF636 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)
Xanthomonas campestris pv. campestris strain 8004 0.11 Xcc-8004.4922.1 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 0.56 Xcc-8004.659.1 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) low > 74

Not shown: 0 genomes with orthologs for ECD_00877 only; 35 genomes with orthologs for ECD_03883 only