Conservation of cofitness between ECD_03281 and ECD_03283 in Escherichia coli BL21

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03281 glycogen synthase 1.0 ECD_03283 glycogen debranching enzyme 0.49 8
Escherichia coli ECRC98 1.00 JDDGAC_20530 glgA glycogen synthase GlgA 1.00 JDDGAC_20520 glgX glycogen debranching protein GlgX low > 86
Escherichia coli ECRC100 1.00 OKFHMN_16900 glgA glycogen synthase GlgA 1.00 OKFHMN_16890 glgX glycogen debranching protein GlgX low > 80
Escherichia coli Nissle 1917 1.00 ECOLIN_RS19625 glycogen synthase GlgA 0.99 ECOLIN_RS19635 glycogen debranching protein GlgX low > 55
Escherichia coli ECOR27 1.00 NOLOHH_08690 glgA glycogen synthase GlgA 0.99 NOLOHH_08680 glgX glycogen debranching protein GlgX 0.55 56
Escherichia coli ECRC102 1.00 NIAGMN_14670 glgA glycogen synthase GlgA 1.00 NIAGMN_14660 glgX glycogen debranching protein GlgX
Escherichia coli ECOR38 1.00 HEPCGN_15715 glgA glycogen synthase GlgA 1.00 HEPCGN_15705 glgX glycogen debranching protein GlgX low > 87
Escherichia coli ECRC101 1.00 MCAODC_07430 glgA glycogen synthase GlgA 1.00 MCAODC_07420 glgX glycogen debranching protein GlgX low > 87
Escherichia fergusonii Becca 1.00 EFB2_00390 Glycogen synthase 0.99 EFB2_00388 Glycogen debranching enzyme low > 86
Escherichia coli ECRC99 1.00 KEDOAH_11240 glgA glycogen synthase GlgA 1.00 KEDOAH_11250 glgX glycogen debranching protein GlgX
Escherichia coli ECRC62 1.00 BNILDI_02825 glgA glycogen synthase GlgA 0.99 BNILDI_02835 glgX glycogen debranching protein GlgX low > 75
Escherichia coli BW25113 1.00 b3429 glgA glycogen synthase (NCBI) 1.00 b3431 glgX glycogen debranching enzyme (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00272 Glycogen synthase 1.00 OHPLBJKB_00270 Glycogen debranching enzyme low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF578 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.87 GFF576 Glycogen debranching enzyme (EC 3.2.1.-) low > 78
Enterobacter asburiae PDN3 0.93 EX28DRAFT_4118 glycogen/starch synthase, ADP-glucose type 0.81 EX28DRAFT_4116 glycogen debranching enzyme GlgX 0.63 25
Enterobacter sp. TBS_079 0.93 MPMX20_04311 Glycogen synthase 0.81 MPMX20_04313 Glycogen debranching enzyme 0.28 57
Klebsiella michiganensis M5al 0.92 BWI76_RS26200 starch synthase 0.79 BWI76_RS26210 glycogen debranching enzyme low > 92
Pantoea sp. MT58 0.83 IAI47_01695 glycogen synthase GlgA 0.69 IAI47_01685 glycogen debranching protein GlgX 0.65 2
Dickeya dadantii 3937 0.81 DDA3937_RS19730 glycogen synthase GlgA 0.61 DDA3937_RS19740 glycogen debranching protein GlgX 0.62 4
Dickeya dianthicola 67-19 0.80 HGI48_RS19840 glycogen synthase GlgA 0.61 HGI48_RS19850 glycogen debranching protein GlgX low > 71
Dickeya dianthicola ME23 0.80 DZA65_RS20915 glycogen synthase GlgA 0.60 DZA65_RS20925 glycogen debranching protein GlgX 0.42 43
Pectobacterium carotovorum WPP14 0.79 HER17_RS01500 glycogen synthase GlgA 0.64 HER17_RS01490 glycogen debranching protein GlgX low > 75
Serratia liquefaciens MT49 0.74 IAI46_23925 glycogen synthase GlgA 0.61 IAI46_23935 glycogen debranching protein GlgX low > 86
Rahnella sp. WP5 0.71 EX31_RS05010 glycogen synthase GlgA 0.59 EX31_RS05020 glycogen debranching protein GlgX low > 89
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS07615 glycogen synthase 0.41 BPHYT_RS33785 glycogen debranching protein low > 109
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_04861 starch synthase 0.42 H281DRAFT_02812 glycogen operon protein low > 103
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS23430 glycogen synthase GlgA 0.42 QEN71_RS10560 glycogen debranching protein GlgX low > 153
Variovorax sp. SCN45 0.48 GFF7302 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.42 GFF7304 Limit dextrin alpha-1,6-maltotetraose-hydrolase (EC 3.2.1.196) low > 127
Variovorax sp. OAS795 0.48 ABID97_RS04535 glycogen synthase GlgA 0.41 ABID97_RS04545 glycogen debranching protein GlgX 0.50 37
Rhodopseudomonas palustris CGA009 0.45 TX73_001985 glycogen synthase GlgA 0.40 TX73_018890 glycogen debranching protein GlgX low > 86
Paraburkholderia graminis OAS925 0.45 ABIE53_001742 starch synthase 0.41 ABIE53_005979 isoamylase low > 113
Azospirillum brasilense Sp245 0.45 AZOBR_RS00855 glycogen synthase 0.44 AZOBR_RS09470 glycogen debranching protein
Azospirillum sp. SherDot2 0.43 MPMX19_02225 Glycogen synthase 0.44 MPMX19_03850 Glycogen operon protein GlgX
Magnetospirillum magneticum AMB-1 0.43 AMB_RS10650 glycogen synthase 0.40 AMB_RS15425 glycogen debranching enzyme GlgX
Sinorhizobium meliloti 1021 0.41 SMc03924 glycogen synthase 0.40 SM_b21446 glycosyl hydrolase low > 103
Agrobacterium fabrum C58 0.39 Atu4075 glycogen synthase 0.35 Atu4073 glycogen debranching protein low > 89
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_2992 Starch (bacterial glycogen) synthase 0.42 Psyr_2997 Glycoside hydrolase, family 13, N-terminal:Alpha amylase, catalytic region low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_2992 Starch (bacterial glycogen) synthase 0.42 Psyr_2997 Glycoside hydrolase, family 13, N-terminal:Alpha amylase, catalytic region low > 86
Pseudomonas sp. S08-1 0.37 OH686_01280 Glycogen synthase, ADP-glucose transglucosylase 0.44 OH686_01305 glycogen debranching enzyme GlgX low > 80
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_23775 glycogen synthase 0.41 AO353_23750 glycogen debranching protein low > 101
Pseudomonas sp. RS175 0.36 PFR28_02145 Glycogen synthase 0.41 PFR28_02150 Glycogen operon protein GlgX 0.46 17
Ralstonia solanacearum PSI07 0.36 RPSI07_RS00900 glycogen synthase GlgA 0.41 RPSI07_RS00880 glycogen debranching enzyme GlgX low > 81
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS16410 glycogen synthase GlgA 0.41 PFLU_RS16435 glycogen debranching protein GlgX 0.96 1
Pseudomonas simiae WCS417 0.36 PS417_14480 glycogen synthase 0.41 PS417_14505 glycogen debranching protein low > 88
Pseudomonas fluorescens SBW25 0.36 PFLU_RS16410 glycogen synthase GlgA 0.41 PFLU_RS16435 glycogen debranching protein GlgX low > 109
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_3245 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.41 PfGW456L13_3250 Glycogen debranching enzyme (EC 3.2.1.-) low > 87
Pseudomonas stutzeri RCH2 0.36 Psest_2172 glycogen/starch synthases, ADP-glucose type 0.43 Psest_2167 glycogen debranching enzyme GlgX 0.23 12
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_1078 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.41 Pf6N2E2_1073 Glycogen debranching enzyme (EC 3.2.1.-) 0.40 2
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_26025 glycogen synthase 0.41 AO356_26000 glycogen debranching protein 0.56 7
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_4687 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.42 Pf1N1B4_4682 Glycogen debranching enzyme (EC 3.2.1.-) low > 87
Pseudomonas putida KT2440 0.35 PP_4050 glycogen synthase 0.42 PP_4055 Glycogen debranching enzyme 0.30 12
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS22290 glycogen synthase GlgA 0.40 RALBFv3_RS22310 glycogen debranching enzyme GlgX low > 76
Ralstonia solanacearum UW163 0.35 UW163_RS22835 glycogen synthase GlgA 0.40 UW163_RS22855 glycogen debranching enzyme GlgX
Ralstonia solanacearum GMI1000 0.34 RS_RS18320 glycogen synthase 0.42 RS_RS18300 glycogen debranching enzyme GlgX low > 80
Herbaspirillum seropedicae SmR1 0.33 HSERO_RS12515 glycogen synthase 0.40 HSERO_RS12505 glycogen debranching protein low > 78
Bosea sp. OAE506 0.33 ABIE41_RS13060 glycogen synthase GlgA 0.39 ABIE41_RS13065 glycogen debranching protein GlgX low > 77
Xanthomonas campestris pv. campestris strain 8004 0.33 Xcc-8004.537.1 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.46 Xcc-8004.1331.1 Glycogen debranching enzyme (EC 3.2.1.-) low > 74
Alteromonas macleodii MIT1002 0.30 MIT1002_00235 Glycogen synthase 0.31 MIT1002_02398 Glycogen debranching enzyme low > 70
Fusobacterium nucleatum SB010 0.30 HUW76_05855 glycogen synthase 0.24 HUW76_06915 glycogen-debranching protein low > 35
Synechococcus elongatus PCC 7942 0.28 Synpcc7942_2518 glgA glycogen synthase 0.32 Synpcc7942_0086 glgX isoamylase. Glycosyl Hydrolase family 13. low > 38
Vibrio cholerae E7946 ATCC 55056 0.27 CSW01_08685 glycogen synthase 0.30 CSW01_19235 glycogen debranching enzyme GlgX low > 62
Mucilaginibacter yixingensis YX-36 DSM 26809 0.26 ABZR88_RS18980 glycogen synthase 0.42 ABZR88_RS11805 glycogen debranching protein GlgX 0.58 21
Shewanella amazonensis SB2B 0.16 Sama_2449 starch synthase (RefSeq) 0.37 Sama_2452 glycogen operon protein (RefSeq) low > 62
Shewanella oneidensis MR-1 0.15 SO1499 glgA glycogen synthase (NCBI ptt file) 0.39 SO1495 glgX glycogen operon protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.15 Shewana3_2930 starch synthase catalytic subunit (RefSeq) 0.39 Shewana3_2933 glycogen debranching enzyme GlgX (RefSeq) low > 73
Shewanella loihica PV-4 0.13 Shew_1172 starch synthase (RefSeq) 0.42 Shew_1169 glycogen debranching enzyme GlgX (RefSeq) low > 60

Not shown: 8 genomes with orthologs for ECD_03281 only; 4 genomes with orthologs for ECD_03283 only