Conservation of cofitness between ECD_03274 and ECD_03070 in Escherichia coli BL21

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03274 DNA-binding transcriptional repressor 1.0 ECD_03070 adaptor protein for GlmZ/GlmY sRNA decay, glucosamine-6-phosphate-regulated; NTPase 0.66 4
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00281 Glycerol-3-phosphate regulon repressor 1.00 OHPLBJKB_00495 RNase adapter protein RapZ low > 73
Escherichia coli ECOR38 0.99 HEPCGN_15760 glpR DeoR/GlpR family transcriptional regulator 1.00 HEPCGN_16800 rapZ RNase adapter RapZ 0.57 77
Escherichia coli ECRC62 0.99 BNILDI_02780 glpR DeoR/GlpR family transcriptional regulator 1.00 BNILDI_01810 rapZ RNase adapter RapZ low > 75
Escherichia coli BW25113 0.99 b3423 glpR DNA-binding transcriptional repressor (NCBI) 1.00 b3205 yhbJ hypothetical protein (NCBI) 0.34 9
Escherichia coli ECOR27 0.99 NOLOHH_08735 glpR DeoR/GlpR family transcriptional regulator 1.00 NOLOHH_09725 rapZ RNase adapter RapZ low > 75
Escherichia coli ECRC101 0.99 MCAODC_07470 glpR DeoR/GlpR family transcriptional regulator 1.00 MCAODC_08445 rapZ RNase adapter RapZ 0.59 63
Escherichia coli ECRC100 0.99 OKFHMN_16940 glpR DeoR/GlpR family transcriptional regulator 1.00 OKFHMN_17925 rapZ RNase adapter RapZ low > 80
Escherichia coli ECRC99 0.99 KEDOAH_11200 glpR DeoR/GlpR family transcriptional regulator 1.00 KEDOAH_10225 rapZ RNase adapter RapZ
Escherichia coli ECRC98 0.99 JDDGAC_20570 glpR DeoR/GlpR family transcriptional regulator 1.00 JDDGAC_21550 rapZ RNase adapter RapZ 0.94 11
Escherichia coli ECRC102 0.99 NIAGMN_14710 glpR DeoR/GlpR family transcriptional regulator 1.00 NIAGMN_15685 rapZ RNase adapter RapZ
Escherichia coli Nissle 1917 0.98 ECOLIN_RS19540 DeoR/GlpR family transcriptional regulator 1.00 ECOLIN_RS18440 RNase adapter RapZ
Escherichia fergusonii Becca 0.98 EFB2_00406 Glycerol-3-phosphate regulon repressor 1.00 EFB2_00618 RNase adapter protein RapZ low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF590 Glycerol-3-phosphate regulon repressor, DeoR family 0.99 GFF2949 Hypothetical ATP-binding protein UPF0042, contains P-loop low > 78
Enterobacter asburiae PDN3 0.91 EX28DRAFT_4123 transcriptional regulator, DeoR family 0.98 EX28DRAFT_3259 Predicted P-loop-containing kinase low > 76
Klebsiella michiganensis M5al 0.90 BWI76_RS26175 DeoR/GlpR family transcriptional regulator 0.97 BWI76_RS25280 RNase adaptor protein RapZ 0.21 71
Enterobacter sp. TBS_079 0.90 MPMX20_04306 Glycerol-3-phosphate regulon repressor 0.99 MPMX20_04111 RNase adapter protein RapZ low > 85
Dickeya dadantii 3937 0.81 DDA3937_RS19670 DeoR/GlpR family transcriptional regulator 0.95 DDA3937_RS01515 RNase adapter RapZ 0.44 31
Pectobacterium carotovorum WPP14 0.81 HER17_RS01530 DeoR/GlpR family transcriptional regulator 0.96 HER17_RS20075 RNase adapter RapZ low > 75
Dickeya dianthicola 67-19 0.81 HGI48_RS19800 DeoR/GlpR family transcriptional regulator 0.95 HGI48_RS01430 RNase adapter RapZ low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS20890 DeoR/GlpR family transcriptional regulator 0.95 DZA65_RS01495 RNase adapter RapZ
Pantoea sp. MT58 0.80 IAI47_01765 DeoR/GlpR family transcriptional regulator 0.96 IAI47_17200 RNase adapter RapZ low > 76
Serratia liquefaciens MT49 0.79 IAI46_23910 DeoR/GlpR family transcriptional regulator 0.95 IAI46_22485 RNase adapter RapZ low > 86
Rahnella sp. WP5 0.79 EX31_RS04995 DeoR/GlpR family transcriptional regulator 0.95 EX31_RS12385 RNase adapter RapZ low > 89
Erwinia tracheiphila SCR3 0.78 LU632_RS23005 DeoR/GlpR family transcriptional regulator 0.95 LU632_RS21295 rapZ RNase adapter RapZ low > 74
Vibrio cholerae E7946 ATCC 55056 0.65 CSW01_18830 DeoR/GlpR family transcriptional regulator 0.60 CSW01_12830 RNase adaptor protein RapZ low > 62
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_18245 DeoR family transcriptional regulator 0.47 AO356_07050 glmZ(sRNA)-inactivating NTPase low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_3906 regulatory protein, DeoR 0.46 Psyr_4150 Uncharacterized P-loop ATPase protein UPF0042 low > 86
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_3906 regulatory protein, DeoR 0.46 Psyr_4150 Uncharacterized P-loop ATPase protein UPF0042 low > 86
Pseudomonas sp. RS175 0.57 PFR28_03369 Glycerol-3-phosphate regulon repressor 0.46 PFR28_00170 RNase adapter protein RapZ low > 88
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_5573 Glycerol-3-phosphate regulon repressor, DeoR family 0.47 Pf6N2E2_3270 Hypothetical ATP-binding protein UPF0042, contains P-loop 0.28 14
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_04185 DeoR family transcriptional regulator 0.48 AO353_05195 glmZ(sRNA)-inactivating NTPase 0.29 59
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_1733 Glycerol-3-phosphate regulon repressor, DeoR family 0.46 PfGW456L13_5017 Hypothetical ATP-binding protein UPF0042, contains P-loop low > 87
Pseudomonas simiae WCS417 0.56 PS417_05570 DeoR faimly transcriptional regulator 0.47 PS417_04330 glmZ(sRNA)-inactivating NTPase
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_768 Glycerol-3-phosphate regulon repressor, DeoR family 0.48 Pf1N1B4_1083 Hypothetical ATP-binding protein UPF0042, contains P-loop
Pseudomonas fluorescens SBW25 0.56 PFLU_RS05655 DeoR/GlpR family transcriptional regulator 0.47 PFLU_RS04385 RNase adapter RapZ low > 109
Pseudomonas putida KT2440 0.56 PP_1074 DNA-binding transcriptional repressor - GlpR-glycerol-3-phosphate 0.47 PP_0949 putative ATP-binding protein UPF0042 low > 96
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS05655 DeoR/GlpR family transcriptional regulator 0.47 PFLU_RS04385 RNase adapter RapZ low > 109
Pseudomonas stutzeri RCH2 0.54 Psest_2774 Transcriptional regulators of sugar metabolism 0.46 Psest_3316 Predicted P-loop-containing kinase
Pseudomonas sp. S08-1 0.54 OH686_20365 Glycerol-3-phosphate regulon repressor GlpR 0.48 OH686_08560 RNase adapter protein RapZ low > 80
Alteromonas macleodii MIT1002 0.52 MIT1002_00199 Glycerol-3-phosphate regulon repressor 0.59 MIT1002_00824 glmZ(sRNA)-inactivating NTPase low > 70
Marinobacter adhaerens HP15 0.52 HP15_2167 transcriptional repressor for the dissimilation of sn-glycerol 3-phosphate, DeoR family protein 0.51 HP15_2445 protein yhbJ low > 73
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.472.1 Glycerol-3-phosphate regulon repressor, DeoR family 0.45 Xcc-8004.1658.1 hypothetical protein low > 74
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS02250 DeoR/GlpR family DNA-binding transcription regulator 0.42 QEN71_RS01735 RNase adapter RapZ low > 153
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS16470 DeoR faimly transcriptional regulator 0.41 BPHYT_RS02885 glmZ(sRNA)-inactivating NTPase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_04225 transcriptional regulator, DeoR family 0.40 H281DRAFT_01931 UPF0042 nucleotide-binding protein low > 103
Azospirillum sp. SherDot2 0.46 MPMX19_05965 Glycerol-3-phosphate regulon repressor 0.36 MPMX19_02622 Nucleotide-binding protein low > 112
Variovorax sp. SCN45 0.46 GFF2678 Glycerol-3-phosphate regulon repressor GlpR 0.39 GFF2356 RNase adapter protein RapZ low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.45 GFF2808 Glycerol-3-phosphate regulon repressor, DeoR family 0.42 GFF828 Hypothetical ATP-binding protein UPF0042, contains P-loop
Ralstonia solanacearum PSI07 0.45 RPSI07_RS09890 DeoR/GlpR transcriptional regulator 0.44 RPSI07_RS22155 RNase adapter RapZ low > 81
Paraburkholderia graminis OAS925 0.45 ABIE53_003465 DeoR family glycerol-3-phosphate regulon repressor 0.39 ABIE53_000714 UPF0042 nucleotide-binding protein 0.27 54
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS13795 DeoR family transcriptional regulator 0.41 RR42_RS02060 nucleotide-binding protein
Ralstonia solanacearum GMI1000 0.45 RS_RS15295 DeoR/GlpR transcriptional regulator 0.44 RS_RS01995 RNase adaptor protein RapZ low > 80
Ralstonia solanacearum UW163 0.45 UW163_RS06265 DeoR/GlpR transcriptional regulator 0.43 UW163_RS02435 RNase adapter RapZ
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS07355 DeoR/GlpR transcriptional regulator 0.43 RALBFv3_RS11145 RNase adapter RapZ low > 76
Variovorax sp. OAS795 0.44 ABID97_RS19960 DeoR/GlpR family DNA-binding transcription regulator 0.40 ABID97_RS23710 RNase adapter RapZ
Dinoroseobacter shibae DFL-12 0.44 Dshi_0631 transcriptional regulator, DeoR family (RefSeq) 0.34 Dshi_0209 hypothetical protein (RefSeq) low > 64
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS03015 DeoR/GlpR family DNA-binding transcription regulator 0.44 ABZR87_RS07035 RNase adapter RapZ low > 80
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS04835 DeoR faimly transcriptional regulator 0.40 HSERO_RS19535 nucleotide-binding protein
Azospirillum brasilense Sp245 0.43 AZOBR_RS25600 DeoR faimly transcriptional regulator 0.36 AZOBR_RS30485 nucleotide-binding protein
Phaeobacter inhibens DSM 17395 0.32 PGA1_c08250 putative glycerol-3-phosphate regulon repressor glpR 0.33 PGA1_c01180 Predicted P-loop-containing kinase low > 62
Rhodanobacter denitrificans MT42 0.25 LRK55_RS01610 DeoR/GlpR family DNA-binding transcription regulator 0.45 LRK55_RS12560 RNase adapter RapZ low > 63
Rhodanobacter denitrificans FW104-10B01 0.25 LRK54_RS01820 DeoR/GlpR family DNA-binding transcription regulator 0.45 LRK54_RS12860 RNase adapter RapZ low > 59
Fusobacterium nucleatum SB010 0.23 HUW76_01930 DeoR/GlpR transcriptional regulator 0.32 HUW76_06700 RNase adapter RapZ low > 35

Not shown: 4 genomes with orthologs for ECD_03274 only; 19 genomes with orthologs for ECD_03070 only