Conservation of cofitness between ECD_00741 and ECD_02837 in Escherichia coli BL21

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00741 7,8-diaminopelargonic acid synthase, PLP-dependent 1.0 ECD_02837 putative type II secretion protein GspE 0.53 15
Escherichia coli ECOR27 0.99 NOLOHH_22775 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.99 NOLOHH_10980 gspE general secretion pathway protein E low > 57
Escherichia coli ECRC101 0.99 OKFHMN_06405 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.55 OKFHMN_00280 gspE type II secretion system ATPase GspE — —
Escherichia coli ECRC101 0.99 MCAODC_25620 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.55 MCAODC_15270 gspE type II secretion system ATPase GspE — —
Escherichia coli ECRC102 0.99 NIAGMN_04450 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.55 NIAGMN_28600 gspE type II secretion system ATPase GspE — —
Escherichia coli ECRC98 0.99 JDDGAC_10040 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.55 JDDGAC_30300 gspE type II secretion system ATPase GspE — —
Escherichia coli ECOR38 0.99 HEPCGN_01635 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.99 HEPCGN_18055 gspE general secretion pathway protein E low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_02939 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.99 OHPLBJKB_00740 Type II secretion system protein E low > 73
Escherichia fergusonii Becca 0.99 EFB2_03331 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.98 EFB2_00846 Type II secretion system protein E low > 86
Klebsiella michiganensis M5al 0.87 BWI76_RS08755 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.57 BWI76_RS05085 general secretion pathway protein GspE low > 92
Dickeya dadantii 3937 0.76 DDA3937_RS08505 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.61 DDA3937_RS14795 type II secretion system ATPase GspE 0.41 43
Dickeya dianthicola 67-19 0.75 HGI48_RS08670 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.61 HGI48_RS14730 type II secretion system ATPase GspE low > 71
Dickeya dianthicola ME23 0.75 DZA65_RS08960 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.61 DZA65_RS15675 type II secretion system ATPase GspE low > 75
Pectobacterium carotovorum WPP14 0.74 HER17_RS13465 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.56 HER17_RS06690 type II secretion system ATPase GspE low > 75
Erwinia tracheiphila SCR3 0.74 LU632_RS09125 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.51 LU632_RS25235 gspE type II secretion system ATPase GspE — —
Vibrio cholerae E7946 ATCC 55056 0.67 CSW01_05640 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA 0.67 CSW01_13785 type II secretion system protein GspE — —
Alteromonas macleodii MIT1002 0.63 MIT1002_01378 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.62 MIT1002_03977 Type II traffic warden ATPase low > 70
Acinetobacter radioresistens SK82 0.57 MPMX26_02454 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.56 MPMX26_00578 Type II secretion system protein E low > 36
Shewanella loihica PV-4 0.56 Shew_1718 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) 0.63 Shew_3618 general secretory pathway protein E (RefSeq) — —
Shewanella sp. ANA-3 0.56 Shewana3_2520 aminotransferase (RefSeq) 0.62 Shewana3_0152 type II secretion system protein E (GspE) (RefSeq) — —
Shewanella oneidensis MR-1 0.56 SO2741 bioA adenosylmethionine--8-amino-7-oxononanoate aminotransferase (NCBI ptt file) 0.62 SO0167 gspE general secretion pathway protein E (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.51 Sama_1437 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) 0.64 Sama_0170 general secretion pathway protein E (RefSeq) — —
Caulobacter crescentus NA1000 0.46 CCNA_01648 adenosylmethionine-8-amino-7-oxononanoate 0.48 CCNA_00173 type II secretion pathway protein E 0.57 29
Caulobacter crescentus NA1000 Δfur 0.46 CCNA_01648 adenosylmethionine-8-amino-7-oxononanoate 0.48 CCNA_00173 type II secretion pathway protein E low > 67
Dyella japonica UNC79MFTsu3.2 0.38 ABZR86_RS10225 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.38 ABZR86_RS13115 type II secretion system ATPase GspE low > 74
Rhodanobacter denitrificans MT42 0.37 LRK55_RS03920 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.39 LRK55_RS09600 type II secretion system ATPase GspE low > 63
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS04150 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.39 LRK54_RS09960 type II secretion system ATPase GspE low > 59
Rhodanobacter sp. FW510-T8 0.35 OKGIIK_11015 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.38 OKGIIK_16215 gspE type II secretion system ATPase GspE low > 52
Desulfovibrio vulgaris Miyazaki F 0.35 DvMF_1002 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) 0.37 DvMF_1028 type II secretion system protein E (RefSeq) low > 51
Pseudomonas sp. S08-1 0.35 OH686_10850 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.58 OH686_11785 type II secretion system protein E low > 80
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_0454 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme 0.40 Psyr_3151 type II secretion system protein E (GspE) low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_0454 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme 0.40 Psyr_3151 type II secretion system protein E (GspE) low > 86
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_08045 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.52 AO353_12550 type II secretion system protein GspE low > 101
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_13570 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.52 AO356_09340 type II secretion system protein GspE low > 104
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_1044 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.51 PfGW456L13_265 General secretion pathway protein E low > 87
Kangiella aquimarina DSM 16071 0.34 B158DRAFT_0179 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.62 B158DRAFT_0690 general secretory pathway protein E — —
Pseudomonas putida KT2440 0.34 PP_4984 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.48 PP_1047 putative protein secretion protein for export low > 96
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_4631 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.52 Pf6N2E2_3745 General secretion pathway protein E low > 103
Pseudomonas stutzeri RCH2 0.34 Psest_0306 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.56 Psest_4202 general secretory pathway protein E low > 67
Marinobacter adhaerens HP15 0.33 HP15_2925 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.58 HP15_1602 type II secretion system protein E low > 73
Xanthomonas campestris pv. campestris strain 8004 0.33 Xcc-8004.1559.1 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.47 Xcc-8004.943.1 General secretion pathway protein E low > 74
Lysobacter sp. OAE881 0.32 ABIE51_RS05265 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.38 ABIE51_RS04520 type II secretion system ATPase GspE low > 62
Variovorax sp. SCN45 0.32 GFF145 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.44 GFF5234 General secretion pathway protein E / Type II secretion cytoplasmic ATP binding protein (PulE, ATPase) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF3993 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.48 GFF1391 General secretion pathway protein E low > 90
Desulfovibrio vulgaris Hildenborough JW710 0.30 DVU2559 bioA adenosylmethionine--8-amino-7-oxononanoate aminotransferase (TIGR) 0.37 DVU1272 gspE general secretion pathway protein E, putative (TIGR) low > 55
Burkholderia phytofirmans PsJN 0.30 BPHYT_RS02165 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.49 BPHYT_RS19600 general secretion pathway protein E low > 109
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS12335 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.47 ABZR87_RS03455 type II secretion system ATPase GspE low > 80
Sphingomonas koreensis DSMZ 15582 0.30 Ga0059261_3674 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.47 Ga0059261_3952 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB low > 68
Paraburkholderia bryophila 376MFSha3.1 0.30 H281DRAFT_02094 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.48 H281DRAFT_02355 type II secretion system protein E (GspE) low > 103
Ralstonia solanacearum PSI07 0.30 RPSI07_RS16705 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.47 RPSI07_RS09515 type II secretion system protein GspE low > 81
Acidovorax sp. GW101-3H11 0.29 Ac3H11_3828 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.44 Ac3H11_2029 General secretion pathway protein E / Type II secretion cytoplasmic ATP binding protein (PulE, ATPase) low > 79
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS00815 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.46 RALBFv3_RS07745 type II secretion system protein GspE low > 76
Ralstonia solanacearum UW163 0.29 UW163_RS14150 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.46 UW163_RS05880 type II secretion system protein GspE — —
Dechlorosoma suillum PS 0.29 Dsui_2880 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.35 Dsui_1320 type IV-A pilus assembly ATPase PilB low > 51
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS01100 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.49 QEN71_RS29515 type II secretion system ATPase GspE — —
Cupriavidus basilensis FW507-4G11 0.27 RR42_RS00925 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA 0.47 RR42_RS19525 general secretion pathway protein GspE low > 128

Not shown: 41 genomes with orthologs for ECD_00741 only; 0 genomes with orthologs for ECD_02837 only