Conservation of cofitness between ECD_00877 and ECD_02391 in Escherichia coli BL21

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00877 HCP oxidoreductase, NADH-dependent 1.0 ECD_02391 phosphoribosylaminoimidazole synthetase low > 61
Escherichia coli ECRC62 1.00 BNILDI_20490 hcr NADH oxidoreductase 1.00 BNILDI_12270 purM Phosphoribosylformylglycinamidine cyclo-ligase low > 75
Escherichia coli ECOR27 1.00 NOLOHH_22235 hcr NADH oxidoreductase 1.00 NOLOHH_13460 purM Phosphoribosylformylglycinamidine cyclo-ligase low > 75
Escherichia coli BW25113 1.00 b0872 hcr HCP oxidoreductase, NADH-dependent (NCBI) 1.00 b2499 purM phosphoribosylaminoimidazole synthetase (NCBI) low > 76
Escherichia coli Nissle 1917 0.99 ECOLIN_RS04640 NADH oxidoreductase 1.00 ECOLIN_RS14190 phosphoribosylformylglycinamidine cyclo-ligase low > 55
Escherichia fergusonii Becca 0.99 EFB2_03189 NADH oxidoreductase HCR 1.00 EFB2_01399 Phosphoribosylformylglycinamidine cyclo-ligase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_02796 NADH oxidoreductase HCR 1.00 OHPLBJKB_01227 Phosphoribosylformylglycinamidine cyclo-ligase low > 73
Escherichia coli ECOR38 0.99 HEPCGN_02175 hcr NADH oxidoreductase 1.00 HEPCGN_20975 purM Phosphoribosylformylglycinamidine cyclo-ligase low > 87
Escherichia coli ECRC100 0.99 OKFHMN_05840 hcr NADH oxidoreductase 0.99 OKFHMN_21810 purM Phosphoribosylformylglycinamidine cyclo-ligase low > 80
Escherichia coli ECRC102 0.99 NIAGMN_03880 hcr NADH oxidoreductase 0.99 NIAGMN_19580 purM Phosphoribosylformylglycinamidine cyclo-ligase
Escherichia coli ECRC99 0.99 KEDOAH_22070 hcr NADH oxidoreductase 0.99 KEDOAH_06410 purM Phosphoribosylformylglycinamidine cyclo-ligase
Escherichia coli ECRC101 0.99 MCAODC_25055 hcr NADH oxidoreductase 0.99 MCAODC_12340 purM Phosphoribosylformylglycinamidine cyclo-ligase low > 87
Escherichia coli ECRC98 0.99 JDDGAC_09475 hcr NADH oxidoreductase 0.99 JDDGAC_25755 purM Phosphoribosylformylglycinamidine cyclo-ligase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF4910 NADH oxidoreductase hcr (EC 1.-.-.-) 0.94 GFF2169 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) low > 78
Enterobacter sp. TBS_079 0.91 MPMX20_01534 NADH oxidoreductase HCR 0.94 MPMX20_03354 Phosphoribosylformylglycinamidine cyclo-ligase low > 85
Klebsiella michiganensis M5al 0.91 BWI76_RS09565 hybrid-cluster NAD(P)-dependent oxidoreductase 0.93 BWI76_RS20965 phosphoribosylformylglycinamidine cyclo-ligase low > 92
Enterobacter asburiae PDN3 0.89 EX28DRAFT_2060 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 0.94 EX28DRAFT_0168 phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)
Pectobacterium carotovorum WPP14 0.62 HER17_RS12430 NADH oxidoreductase 0.89 HER17_RS15465 phosphoribosylformylglycinamidine cyclo-ligase low > 75
Serratia liquefaciens MT49 0.59 IAI46_08470 NADH oxidoreductase 0.88 IAI46_18885 phosphoribosylformylglycinamidine cyclo-ligase low > 86
Dickeya dadantii 3937 0.59 DDA3937_RS09535 NADH oxidoreductase 0.87 DDA3937_RS06025 phosphoribosylformylglycinamidine cyclo-ligase low > 74
Dickeya dianthicola ME23 0.57 DZA65_RS09860 NADH oxidoreductase 0.87 DZA65_RS06420 phosphoribosylformylglycinamidine cyclo-ligase low > 75
Dickeya dianthicola 67-19 0.57 HGI48_RS09550 NADH oxidoreductase 0.86 HGI48_RS06070 phosphoribosylformylglycinamidine cyclo-ligase low > 71
Rahnella sp. WP5 0.53 EX31_RS18595 NADH oxidoreductase 0.90 EX31_RS22695 phosphoribosylformylglycinamidine cyclo-ligase low > 89
Shewanella sp. ANA-3 0.27 Shewana3_3010 oxidoreductase FAD-binding subunit (RefSeq) 0.76 Shewana3_2545 phosphoribosylaminoimidazole synthetase (RefSeq) low > 73
Shewanella loihica PV-4 0.27 Shew_1070 oxidoreductase FAD-binding subunit (RefSeq) 0.75 Shew_1513 phosphoribosylaminoimidazole synthetase (RefSeq)
Shewanella oneidensis MR-1 0.27 SO1364 iron-sulfur cluster-binding protein (NCBI ptt file) 0.75 SO2760 purM phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.26 Sama_0896 iron-sulfur cluster-binding protein (RefSeq) 0.78 Sama_2097 phosphoribosylaminoimidazole synthetase (RefSeq) low > 62
Ralstonia solanacearum GMI1000 0.23 RS_RS17500 hybrid-cluster NAD(P)-dependent oxidoreductase 0.54 RS_RS13145 phosphoribosylformylglycinamidine cyclo-ligase
Sinorhizobium meliloti 1021 0.23 SMc00981 ferredoxin protein 0.51 SMc00615 phosphoribosylaminoimidazole synthetase low > 103
Paraburkholderia sabiae LMG 24235 0.22 QEN71_RS08350 hybrid-cluster NAD(P)-dependent oxidoreductase 0.55 QEN71_RS26445 phosphoribosylformylglycinamidine cyclo-ligase low > 153
Pseudomonas simiae WCS417 0.22 PS417_26215 ferredoxin 0.69 PS417_20120 phosphoribosylaminoimidazole synthetase
Pseudomonas fluorescens SBW25 0.22 PFLU_RS27860 glycine-betaine demethylase subunit GbcB 0.69 PFLU_RS22065 phosphoribosylformylglycinamidine cyclo-ligase
Pseudomonas fluorescens SBW25-INTG 0.22 PFLU_RS27860 glycine-betaine demethylase subunit GbcB 0.69 PFLU_RS22065 phosphoribosylformylglycinamidine cyclo-ligase
Paraburkholderia graminis OAS925 0.21 ABIE53_006130 ferredoxin-NADP reductase 0.54 ABIE53_000874 phosphoribosylformylglycinamidine cyclo-ligase
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_00630 ferredoxin 0.69 AO356_19090 phosphoribosylaminoimidazole synthetase low > 104
Pseudomonas fluorescens GW456-L13 0.21 PfGW456L13_1112 GbcB Glycine betaine demethylase subunit B 0.68 PfGW456L13_4252 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_4775 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region 0.69 Psyr_3689 phosphoribosylformylglycinamidine cyclo-ligase
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_4714 GbcB Glycine betaine demethylase subunit B 0.69 Pf6N2E2_5729 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_4775 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region 0.69 Psyr_3689 phosphoribosylformylglycinamidine cyclo-ligase
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_02476 Ferredoxin-NADP reductase 0.54 H281DRAFT_04710 phosphoribosylformylglycinamidine cyclo-ligase low > 103
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS25220 ferredoxin oxidoreductase 0.54 BPHYT_RS03640 phosphoribosylformylglycinamidine cyclo-ligase low > 109
Pseudomonas sp. RS175 0.21 PFR28_04139 3-ketosteroid-9-alpha-monooxygenase, ferredoxin reductase component 0.68 PFR28_03217 Phosphoribosylformylglycinamidine cyclo-ligase low > 88
Pseudomonas fluorescens FW300-N2E3 0.21 AO353_07675 ferredoxin 0.68 AO353_02680 phosphoribosylaminoimidazole synthetase
Pseudomonas fluorescens FW300-N1B4 0.21 Pf1N1B4_2448 GbcB Glycine betaine demethylase subunit B 0.68 Pf1N1B4_3698 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)
Pseudomonas putida KT2440 0.21 PP_0316 putative glycine-betaine dioxygenase subunit 0.69 PP_1665 Phosphoribosylformylglycinamidine cyclo-ligase
Agrobacterium fabrum C58 0.20 Atu0727 ferredoxin I 0.53 Atu1141 Phosphoribosylglycinamide synthetase low > 89
Azospirillum sp. SherDot2 0.20 MPMX19_04719 3-ketosteroid-9-alpha-monooxygenase, ferredoxin reductase component 0.53 MPMX19_01304 Phosphoribosylformylglycinamidine cyclo-ligase low > 112
Echinicola vietnamensis KMM 6221, DSM 17526 0.19 Echvi_0363 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 0.08 Echvi_0734 Phosphoribosylaminoimidazole (AIR) synthetase
Pseudomonas sp. S08-1 0.19 OH686_04175 Flavodoxin (ferredoxin-NADPH reductases) family 1 0.69 OH686_18995 Phosphoribosylformylglycinamidine cyclo-ligase
Phaeobacter inhibens DSM 17395 0.17 PGA1_c25310 putative NADH oxidoreductase 0.52 PGA1_c13260 phosphoribosylformylglycinamidine cyclo-ligase PurM low > 62
Pedobacter sp. GW460-11-11-14-LB5 0.16 CA265_RS25075 phenylacetic acid degradation protein 0.09 CA265_RS05175 phosphoribosylformylglycinamidine cyclo-ligase
Cupriavidus basilensis FW507-4G11 0.16 RR42_RS23745 phenylacetic acid degradation protein 0.59 RR42_RS17220 phosphoribosylaminoimidazole synthetase
Acinetobacter radioresistens SK82 0.15 MPMX26_01556 1,2-phenylacetyl-CoA epoxidase, subunit E 0.67 MPMX26_02206 Phosphoribosylformylglycinamidine cyclo-ligase
Rhodopseudomonas palustris CGA009 0.15 TX73_019490 phenylacetate-CoA oxygenase/reductase subunit PaaK 0.47 TX73_015785 phosphoribosylformylglycinamidine cyclo-ligase
Herbaspirillum seropedicae SmR1 0.15 HSERO_RS20630 phenylacetic acid degradation protein 0.56 HSERO_RS03165 phosphoribosylaminoimidazole synthetase
Marinobacter adhaerens HP15 0.15 HP15_2701 phenylacetic acid degradation oxidoreductase PaaK 0.68 HP15_1299 phosphoribosylaminoimidazole synthetase
Variovorax sp. SCN45 0.14 GFF6097 1,2-phenylacetyl-CoA epoxidase, subunit E (EC 1.14.13.149) 0.55 GFF3941 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) low > 127
Ralstonia solanacearum PSI07 0.14 RPSI07_RS02150 phenylacetate-CoA oxygenase/reductase subunit PaaK 0.55 RPSI07_RS12020 phosphoribosylformylglycinamidine cyclo-ligase
Ralstonia solanacearum IBSBF1503 0.14 RALBFv3_RS20640 phenylacetate-CoA oxygenase/reductase subunit PaaK 0.55 RALBFv3_RS05280 phosphoribosylformylglycinamidine cyclo-ligase
Ralstonia solanacearum UW163 0.14 UW163_RS18535 phenylacetate-CoA oxygenase/reductase subunit PaaK 0.55 UW163_RS08345 phosphoribosylformylglycinamidine cyclo-ligase
Variovorax sp. OAS795 0.13 ABID97_RS22805 1,2-phenylacetyl-CoA epoxidase subunit PaaE 0.55 ABID97_RS08700 phosphoribosylformylglycinamidine cyclo-ligase
Dinoroseobacter shibae DFL-12 0.13 Dshi_3822 phenylacetate-CoA oxygenase/reductase, PaaK subunit (RefSeq) 0.49 Dshi_1889 phosphoribosylformylglycinamidine cyclo-ligase (RefSeq) low > 64
Hydrogenophaga sp. GW460-11-11-14-LB1 0.13 GFF1689 Phenylacetate-CoA oxygenase/reductase, PaaK subunit 0.55 GFF3433 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)
Xanthomonas campestris pv. campestris strain 8004 0.11 Xcc-8004.4922.1 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 0.54 Xcc-8004.1676.1 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) low > 74

Not shown: 1 genomes with orthologs for ECD_00877 only; 39 genomes with orthologs for ECD_02391 only