Conservation of cofitness between ECD_03237 and ECD_01959 in Escherichia coli BL21

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03237 phosphoglycolate phosphatase 1.0 ECD_01959 GDP-D-mannose dehydratase, NAD(P)-binding low > 61
Escherichia coli BW25113 1.00 b3385 gph phosphoglycolate phosphatase (NCBI) 1.00 b2053 gmd GDP-D-mannose dehydratase, NAD(P)-binding (NCBI) low > 76
Escherichia coli ECRC100 0.99 OKFHMN_17135 gph phosphoglycolate phosphatase 1.00 OKFHMN_24345 GDP-mannose 4,6-dehydratase low > 80
Escherichia coli ECRC62 0.99 BNILDI_02595 gph phosphoglycolate phosphatase 1.00 BNILDI_14585 GDP-mannose 4,6-dehydratase low > 75
Escherichia coli ECRC101 0.99 MCAODC_07665 gph phosphoglycolate phosphatase 1.00 MCAODC_20595 GDP-mannose 4,6-dehydratase low > 87
Escherichia coli ECRC98 0.99 JDDGAC_20765 gph phosphoglycolate phosphatase 1.00 JDDGAC_28455 GDP-mannose 4,6-dehydratase low > 86
Escherichia coli ECRC102 0.99 NIAGMN_14905 gph phosphoglycolate phosphatase 1.00 NIAGMN_22290 GDP-mannose 4,6-dehydratase
Escherichia coli ECOR38 0.99 HEPCGN_15955 gph phosphoglycolate phosphatase 1.00 HEPCGN_03045 GDP-mannose 4,6-dehydratase low > 87
Escherichia coli ECRC99 0.99 KEDOAH_11005 gph phosphoglycolate phosphatase 1.00 KEDOAH_03805 GDP-mannose 4,6-dehydratase
Escherichia fergusonii Becca 0.99 EFB2_00443 Phosphoglycolate phosphatase 1.00 EFB2_01801 GDP-mannose 4,6-dehydratase low > 86
Escherichia coli ECOR27 0.99 NOLOHH_08925 gph phosphoglycolate phosphatase 1.00 NOLOHH_15675 GDP-mannose 4,6-dehydratase low > 75
Escherichia coli Nissle 1917 0.99 ECOLIN_RS19340 phosphoglycolate phosphatase 1.00 ECOLIN_RS12095 GDP-mannose 4,6-dehydratase low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF634 Phosphoglycolate phosphatase (EC 3.1.3.18) 0.97 GFF3875 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) low > 78
Enterobacter asburiae PDN3 0.80 EX28DRAFT_4157 2-phosphoglycolate phosphatase, prokaryotic 0.98 EX28DRAFT_0502 GDP-mannose 4,6-dehydratase low > 76
Enterobacter sp. TBS_079 0.80 MPMX20_04274 Phosphoglycolate phosphatase 0.97 MPMX20_03035 GDP-mannose 4,6-dehydratase low > 85
Dickeya dianthicola ME23 0.56 DZA65_RS20740 phosphoglycolate phosphatase 0.84 DZA65_RS19730 GDP-mannose 4,6-dehydratase low > 75
Dickeya dadantii 3937 0.56 DDA3937_RS19525 phosphoglycolate phosphatase 0.84 DDA3937_RS18665 GDP-mannose 4,6-dehydratase low > 74
Dickeya dianthicola 67-19 0.56 HGI48_RS19655 phosphoglycolate phosphatase 0.85 HGI48_RS18595 GDP-mannose 4,6-dehydratase low > 71
Pectobacterium carotovorum WPP14 0.55 HER17_RS01800 phosphoglycolate phosphatase 0.79 HER17_RS14540 GDP-mannose 4,6-dehydratase low > 75
Rahnella sp. WP5 0.48 EX31_RS04700 phosphoglycolate phosphatase 0.53 EX31_RS02865 GDP-mannose 4,6-dehydratase low > 89
Pseudomonas putida KT2440 0.37 PP_0416 Phosphoglycolate phosphatase 0.47 PP_1799 GDP-mannose 4,6-dehydratase low > 96
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_1216 Phosphoglycolate phosphatase (EC 3.1.3.18) 0.40 PfGW456L13_2338 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) low > 87
Vibrio cholerae E7946 ATCC 55056 0.34 CSW01_13280 phosphoglycolate phosphatase 0.83 CSW01_01280 GDP-mannose 4,6-dehydratase low > 62
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_2544 Phosphoglycolate phosphatase (EC 3.1.3.18) 0.40 Pf1N1B4_1965 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) low > 87
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_14415 phosphoglycolate phosphatase 0.40 AO356_11835 GDP-mannose 4,6-dehydratase low > 104
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_07235 phosphoglycolate phosphatase 0.42 AO353_10245 GDP-mannose 4,6-dehydratase low > 101
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_4821 Phosphoglycolate phosphatase (EC 3.1.3.18) 0.40 Pf6N2E2_4242 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) low > 103
Pseudomonas sp. RS175 0.33 PFR28_04048 Phosphoglycolate phosphatase 0.40 PFR28_04554 GDP-mannose 4,6-dehydratase low > 88
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS27385 phosphoglycolate phosphatase 0.78 PFLU_RS17890 GDP-mannose 4,6-dehydratase low > 109
Pseudomonas fluorescens SBW25 0.32 PFLU_RS27385 phosphoglycolate phosphatase 0.78 PFLU_RS17890 GDP-mannose 4,6-dehydratase low > 109
Dechlorosoma suillum PS 0.32 Dsui_0220 2-phosphoglycolate phosphatase 0.71 Dsui_0085 GDP-mannose 4,6-dehydratase low > 51
Pseudomonas stutzeri RCH2 0.31 Psest_3651 2-phosphoglycolate phosphatase, prokaryotic 0.84 Psest_1818 GDP-mannose 4,6-dehydratase low > 67
Paraburkholderia sabiae LMG 24235 0.26 QEN71_RS27545 phosphoglycolate phosphatase 0.72 QEN71_RS26360 GDP-mannose 4,6-dehydratase low > 153
Hydrogenophaga sp. GW460-11-11-14-LB1 0.26 GFF3102 Phosphoglycolate phosphatase (EC 3.1.3.18) 0.79 GFF2554 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) low > 90
Herbaspirillum seropedicae SmR1 0.26 HSERO_RS19430 phosphoglycolate phosphatase 0.10 HSERO_RS22045 UDP-glucose 4-epimerase low > 78
Variovorax sp. SCN45 0.26 GFF5899 Phosphoglycolate phosphatase (EC 3.1.3.18) 0.74 GFF61 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) low > 127
Ralstonia solanacearum PSI07 0.26 RPSI07_RS07070 phosphoglycolate phosphatase 0.46 RPSI07_RS19840 GDP-mannose 4,6-dehydratase low > 81
Paraburkholderia graminis OAS925 0.26 ABIE53_003639 phosphoglycolate phosphatase 0.71 ABIE53_000940 GDPmannose 4,6-dehydratase low > 113
Burkholderia phytofirmans PsJN 0.26 BPHYT_RS17385 phosphoglycolate phosphatase 0.71 BPHYT_RS04000 GDP-mannose 4,6-dehydratase low > 109
Castellaniella sp019104865 MT123 0.26 ABCV34_RS10275 phosphoglycolate phosphatase 0.71 ABCV34_RS12935 GDP-mannose 4,6-dehydratase
Cupriavidus basilensis FW507-4G11 0.25 RR42_RS18290 phosphoglycolate phosphatase 0.79 RR42_RS33235 GDP-mannose 4,6-dehydratase low > 128
Variovorax sp. OAS795 0.25 ABID97_RS05240 phosphoglycolate phosphatase 0.45 ABID97_RS05705 GDP-mannose 4,6-dehydratase low > 91
Paraburkholderia bryophila 376MFSha3.1 0.24 H281DRAFT_05716 phosphoglycolate phosphatase 0.71 H281DRAFT_04776 GDPmannose 4,6-dehydratase low > 103
Azospirillum sp. SherDot2 0.23 MPMX19_04508 Phosphoglycolate phosphatase 0.63 MPMX19_06644 GDP-mannose 4,6-dehydratase low > 112
Xanthomonas campestris pv. campestris strain 8004 0.23 Xcc-8004.4534.1 Phosphoglycolate phosphatase (EC 3.1.3.18) 0.46 Xcc-8004.4503.1 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) low > 74
Agrobacterium fabrum C58 0.21 Atu1614 phosphoglycolate phosphatase 0.59 Atu4789 GDP-mannose 4,6-dehydratase low > 89
Azospirillum brasilense Sp245 0.21 AZOBR_RS30415 phosphoglycolate phosphatase 0.43 AZOBR_RS33465 GDP-mannose 4 6-dehydratase low > 97
Desulfovibrio vulgaris Hildenborough JW710 0.21 DVU0130 phosphoglycolate phosphatase, putative (TIGR) 0.72 DVU0448 gmd GDP-mannose 4,6-dehydratase (TIGR) low > 55
Bosea sp. OAE506 0.20 ABIE41_RS20995 phosphoglycolate phosphatase 0.45 ABIE41_RS02910 GDP-mannose 4,6-dehydratase low > 77
Rhodanobacter denitrificans FW104-10B01 0.19 LRK54_RS02460 phosphoglycolate phosphatase 0.13 LRK54_RS05640 GDP-mannose 4,6-dehydratase low > 59
Rhodanobacter denitrificans MT42 0.19 LRK55_RS02215 phosphoglycolate phosphatase 0.68 LRK55_RS03650 GDP-mannose 4,6-dehydratase low > 63
Caulobacter crescentus NA1000 0.19 CCNA_02390 phosphoglycolate phosphatase 0.64 CCNA_00472 GDP-mannose 4,6 dehydratase low > 66
Caulobacter crescentus NA1000 Δfur 0.19 CCNA_02390 phosphoglycolate phosphatase 0.64 CCNA_00472 GDP-mannose 4,6 dehydratase low > 67
Rhodanobacter sp. FW510-T8 0.19 OKGIIK_09515 gph phosphoglycolate phosphatase 0.45 OKGIIK_01210 gmd GDP-mannose 4,6-dehydratase low > 52
Phocaeicola dorei CL03T12C01 0.18 ABI39_RS10015 HAD family hydrolase 0.62 ABI39_RS20410 GDP-mannose 4,6-dehydratase low > 72
Phocaeicola vulgatus CL09T03C04 0.17 HMPREF1058_RS14395 HAD family hydrolase 0.62 HMPREF1058_RS06615 GDP-mannose 4,6-dehydratase low > 67
Bacteroides ovatus ATCC 8483 0.16 BACOVA_05034 HAD hydrolase, family IA, variant 1 0.61 BACOVA_00511 GDP-mannose 4,6-dehydratase low > 94
Bacteroides thetaiotaomicron VPI-5482 0.16 BT4184 phosphoglycolate phosphatase (NCBI ptt file) 0.61 BT1224 GDP-mannose 4,6-dehydratase (NCBI ptt file)
Phaeobacter inhibens DSM 17395 0.16 PGA1_c10250 phosphoglycolate phosphatase-like protein 0.81 PGA1_65p00310 GDP-mannose 4,6-dehydratase Gmd 0.17 62
Bacteroides stercoris CC31F 0.16 HMPREF1181_RS08825 HAD family hydrolase 0.61 HMPREF1181_RS12530 GDP-mannose 4,6-dehydratase low > 56
Rhodopseudomonas palustris CGA009 0.16 TX73_010205 HAD-IA family hydrolase 0.45 TX73_020470 GDP-mannose 4,6-dehydratase low > 86
Brevundimonas sp. GW460-12-10-14-LB2 0.14 A4249_RS07220 HAD-IA family hydrolase 0.43 A4249_RS12980 GDP-mannose 4,6-dehydratase low > 48
Parabacteroides merdae CL09T00C40 0.12 HMPREF1078_RS13105 HAD hydrolase-like protein 0.64 HMPREF1078_RS00185 GDP-mannose 4,6-dehydratase low > 61
Mucilaginibacter yixingensis YX-36 DSM 26809 0.11 ABZR88_RS09890 HAD family hydrolase 0.66 ABZR88_RS18375 GDP-mannose 4,6-dehydratase

Not shown: 24 genomes with orthologs for ECD_03237 only; 12 genomes with orthologs for ECD_01959 only